Zootoca vivipara (common lizard): 118089981 Help Entry 118089981         CDS       T07275                                  Symbol TRAF6 Name (RefSeq) TNF receptor-associated factor 6   KO K03175   TNF receptor-associated factor 6 [EC:2.3.2.27] Organism zvi  Zootoca vivipara (common lizard) Pathway zvi04010   MAPK signaling pathway zvi04120   Ubiquitin mediated proteolysis zvi04140   Autophagy - animal zvi04144   Endocytosis zvi04620   Toll-like receptor signaling pathway zvi04621   NOD-like receptor signaling pathway zvi04622   RIG-I-like receptor signaling pathway zvi05132   Salmonella infection zvi05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:zvi00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     118089981 (TRAF6)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     118089981 (TRAF6)  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     118089981 (TRAF6)    04140 Autophagy - animal     118089981 (TRAF6)  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     118089981 (TRAF6)    04621 NOD-like receptor signaling pathway     118089981 (TRAF6)    04622 RIG-I-like receptor signaling pathway     118089981 (TRAF6)  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     118089981 (TRAF6)   09171 Infectious disease: bacterial    05132 Salmonella infection     118089981 (TRAF6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:zvi04131]     118089981 (TRAF6)    04121 Ubiquitin system [BR:zvi04121]     118089981 (TRAF6) Enzymes [BR:zvi01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      118089981 (TRAF6) Membrane trafficking [BR:zvi04131]  Endocytosis   Clathrin-mediated endocytosis    Ubiquitin E3 ligases     118089981 (TRAF6) Ubiquitin system [BR:zvi04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     118089981 (TRAF6) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 zf-TRAF zf-C3HC4_2 zf-C3HC4 TRAF6_Z2 zf-RING_UBOX zf-RING_2 zf-C3HC4_3 zf-C3HC4_4 Med21 SlyX zf-TRAF_2 zf-RING_5 TRAF3_RING RING_XB3-XBAT31 zf-RING_11 Sina_ZnF DUF4455 U-box PUMA_CC PspA_IM30 DUF16 CEP104_ZnF ATG16 TMF_DNA_bd DUF1664 HMMR_N TMF_TATA_bd MTR4_beta-barrel PEARLI-4 UPF0242 DUF7607 Motif Other DBs NCBI-GeneID:  118089981 NCBI-ProteinID:  XP_034981102 LinkDB All DBs Position LG8:complement(77870177..77890464) Genome browser AA seq 534 aa AA seqDB search MSLLHSDSSFEASGQDSICCAAMASSCSAGAKEKSINTSVSNGTGGTLSNSFMEEIQGYD VEFDPPLESKYECPICLMALREAVQTPCGHRFCKACIVKSIRDAGHKCPIDNEILLETQL FPDNFAKREILSLMVKCPNKGCHQKMELRHLEDHELHCGFAPEKCPQCHGIFQKNQIQDH IKQECPRRQTSCPNCAMWMPYEEKELHDQMCLLANVCCEYCNTVLIREQLPNHYDNDCPT APVPCTYSPFGCPEKMQRNELARHMQEFTPVHMRMMAQTLLNITNFHGAIPYDPSPSCEC SPEVQNFKETIQQLEGRLVRQDHQIRELIAKMETQNSQMGDLKRTIRNLEEKIAEMESQQ CNGIFLWKIENFSVYLRAQEEERPVVIHSPGFYTGRPGYKLCLRLHIQSPNAQRCANYIS LFVHTMQGHYDSHLPWPFQGTIRLSILDQSEGLSRHNHEEVMDTKPELLAFQRPMVDRNP KGFGYVTFMQLQTLKQKTYIKEDTILVRCEVITRLDLNSLRREGFQPRSTDGTA NT seq 1605 nt NT seq  +upstreamnt  +downstreamnt atgagtctgctacacagtgacagcagctttgaagccagtggccaggatagcatctgctgt gcagctatggccagcagttgcagcgctggagccaaagaaaaaagcatcaacaccagtgtc agcaatggcactggggggacactttcaaactctttcatggaagaaatccagggctatgat gtggagtttgaccctccgctggaaagtaaatacgaatgcccaatctgtctgatggctctc cgggaggcggtgcagacaccatgcggacaccgcttctgcaaagcttgcattgtcaaatcc ataagagatgctggtcataaatgtccaatcgacaacgaaattttactcgaaactcaactc tttcctgacaactttgcaaaacgggaaatcctatcgctgatggtgaagtgtcccaacaag ggctgtcatcagaagatggaactcaggcatttagaggaccatgagctgcattgtggcttt gctccagagaaatgtccccagtgccatggcattttccaaaagaatcagatacaggatcat ataaagcaagaatgccctcgacgacaaacctcttgtccaaactgtgctatgtggatgcct tatgaagaaaaagagcttcatgaccagatgtgccttttagcaaatgtctgctgtgaatac tgcaatacagtgctaatcagagaacagcttcctaatcactacgataatgattgcccaact gctccagtaccgtgtacatacagcccctttggatgtccagaaaaaatgcagagaaatgag ttggcacggcatatgcaggagttcaccccagtccatatgagaatgatggctcagactctc ctcaatatcactaatttccatggtgctatcccatatgacccgtcaccttcctgtgaatgt agcccagaggtccaaaacttcaaggagacgattcaacaactggaaggtcgcttggtaagg caagatcaccagatccgagaactcatagcaaagatggagacacaaaacagccagatggga gatctcaaacgcactatccgaaatctggaggaaaaaattgcagaaatggaatcacagcag tgtaatggtattttcctgtggaagattgagaatttcagtgtttacttgagagcgcaagaa gaagaaaggcctgttgtcatccacagcccaggcttctacacagggagacctggctacaaa ctttgcttgcggctgcatatccagtcgccgaatgcacagcgctgtgccaactatatttcc ctttttgttcatacgatgcaagggcactatgacagtcacctgccttggcccttccaaggc accatacggctttctatcctggatcagtcagaaggattgtcaaggcacaaccatgaggaa gtgatggataccaagcctgagctgctcgctttccagcgtcccatggtcgaccgcaaccca aaaggctttggatatgtgacgtttatgcagttgcagacgctaaaacaaaaaacatatata aaggaggatactatcctagtgcgctgtgaggtcataacacgcttagacttaaacagtctc cgaagggagggttttcagcctcgtagtactgatggaacggcatag

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