+E RModule
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KEGG Reaction Modules
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AReaction modules
B
B Carboxylic acid metabolism
C 2-Oxocarboxylic acid chain extension
D RM001 2-Oxocarboxylic acid chain extension by tricarboxylic acid pathway
E M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
E M00433 Lysine biosynthesis, 2-oxoglutarate => 2-oxoadipate
E M00608 2-Oxocarboxylic acid chain extension, 2-oxoglutarate => 2-oxoadipate => 2-oxopimelate => 2-oxosuberate
E M00535 Isoleucine biosynthesis, pyruvate => 2-oxobutanoate
E M00432 Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
C 2-Oxocarboxylic acid chain modification
D RM002 Carboxyl to amino conversion using protective N-acetyl group (basic amino acid synthesis)
E M00028 Ornithine biosynthesis, glutamate => ornithine
E M00763 Ornithine biosynthesis, mediated by LysW, glutamate => ornithine
E M00031 Lysine biosynthesis, mediated by LysW, 2-aminoadipate => lysine
D RM032 Carboxyl to amino conversion without using protective group
E M00033 Ectoine biosynthesis, aspartate => ectoine
D RM033 Branched-chain addition (branched-chain amino acid synthesis)
E M00019 Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine
D RM030 Glucosinolate synthesis
E M00370 Glucosinolate biosynthesis, tryptophan => glucobrassicin
D RM044 2-Oxocarboxylic acid conversion to its CoA derivative
E M00307 Pyruvate oxidation, pyruvate => acetyl-CoA
E M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
E M00032 Lysine degradation, lysine => saccharopine => acetoacetyl-CoA
D RM901 Reductive amination of 2-oxocarboxylic acid (aminotransferase reaction)
D RM903 Oxidative decarboxylation of 2-oxoacid to form its CoA derivative
C Fatty acid synthesis and degradation
D RM018 Beta oxidation in acyl-CoA degradation
E M00087 beta-Oxidation
E M00861 beta-Oxidation, peroxisome, VLCFA
E M00862 beta-Oxidation, peroxisome, tri/dihydroxycholestanoyl-CoA => choloyl/chenodeoxycholoyl-CoA
D RM020 Fatty acid synthesis using acetyl-CoA (reversal of RM018)
E M00085 Fatty acid elongation in mitochondria
D RM021 Fatty acid synthesis using malonyl-CoA
E M00083 Fatty acid biosynthesis, elongation
E M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP
E M00885 Meromycolic acid biosynthesis, initiation and elongation FAS II (KasA)
E M00886 Meromycolic acid biosynthesis, initiation and elongation FAS II (KasA and KasB)
E M00415 Fatty acid elongation in endoplasmic reticulum
C Acyl-CoA metabolism
D RM019 Acyl-CoA conversion via dicarboxylate semialdehyde
E M00013 Malonate semialdehyde pathway, propanoyl-CoA => Acetyl-CoA
E M00375 Hydroxypropionate-hydroxybutylate cycle
E M00376 3-Hydroxypropionate bi-cycle
B
B Nucleotide sugar metabolism
C Nucleotide sugar biosynthesis
D RM022 Nucleotide sugar biosynthesis, type 1
D RM023 Nucleotide sugar biosynthesis, type 2
D RM039 Nucleotide sugar biosynthesis, type 3
D RM042 Nucleotide sugar biosynthesis, type 4
E M00955 CMP-Neu5Ac/Neu5Gc biosynthesis, animals, UDP-GlcNAc => CMP-Neu5Ac => CMP-Neu5Gc
E M00954 CMP-KDN biosynthesis, Man-6P => CMP-KDN
E M00063 CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
E M00922 CMP-Neu5Ac biosynthesis, bacteria, UDP-GlcNAc => CMP-Neu5Ac
E M01011 CMP-Leg5Ac7Ac biosynthesis, UDP-BacNAc4NAc => CMP-Leg5Ac7Ac
E M01012 CMP-Leg5Ac7Ala biosynthesis, UDP-GlcNAc => CMP-Leg5Ac7Ala
E M01008 CMP-8eLeg5Ac7Ac biosynthesis, UDP-GlcNAc => CMP-8eLeg5Ac7Ac
E M01007 CMP-Pse5Ac7Ac biosynthesis, UDP-GlcNAc => CMP-Pse5Ac7Ac
C Deoxy sugar metabolism
D RM035 Transamination and N,N-dimethylation in polyketide biosynthesis
E M00796 dTDP-D-mycaminose biosynthesis
E M00797 dTDP-D-desosamine biosynthesis
E M00802 dTDP-D-forosamine biosynthesis
E M00803 dTDP-D-angolosamine biosynthesis
E M00800 dTDP-L-megosamine biosynthesis
E M00780 Tetracycline/oxytetracycline biosynthesis, pretetramide => tetracycline/oxytetracycline
E M00823 Chlortetracycline biosynthesis, pretetramide => chlortetracycline
D RM043 Transamination and N-acetylation in deoxysugar biosynthesis
E M01024 dTDP-Qui3NAc biosynthesis, Glc-1P => dTDP-Qui3NAc
E M01023 dTDP-D-Fuc3NAc biosynthesis, Glc-1P => dTDP-D-Fuc3NAc
E M01026 dTDP-Qui4NAc biosynthesis, Glc-1P => dTDP-Qui4NAc
E M01025 dTDP-D-Fuc4NAc biosynthesis, Glc-1P => dTDP-D-Fuc4NAc
E M01020 GDP-D-Rha4NAc biosynthesis, GDP-Man => GDP-D-Rha4N => GDP-D-Rha4NAc
E M01010 UDP-BacNAc4NAc biosynthesis, UDP-GlcNAc => UDP-BacNAc4NAc
E M01012 CMP-Leg5Ac7Ala biosynthesis, UDP-GlcNAc => CMP-Leg5Ac7Ala
E M01033 UDP-yelosamine biosynthesis, UDP-GlcNAc => UDP-yelosamine
E M01008 CMP-8eLeg5Ac7Ac biosynthesis, UDP-GlcNAc => CMP-8eLeg5Ac7Ac
E M01007 CMP-Pse5Ac7Ac biosynthesis, UDP-GlcNAc => CMP-Pse5Ac7Ac
E M01035 UDP-ManNAc3NAcA biosynthesis, UDP-GlcNAc => UDP-ManNAc3NAcA
D RM036 Epimerization and reduction in deoxysugar biosynthesis
E M00793 dTDP-L-rhamnose biosynthesis
E M00801 dTDP-L-olivose biosynthesis
E M00794 dTDP-6-deoxy-D-allose biosynthesis
E M00800 dTDP-L-megosamine biosynthesis
E M00798 dTDP-L-mycarose biosynthesis
D RM037 Deoxygenation (transamination and deamination) in deoxysugar biosynthesis
E M00797 dTDP-D-desosamine biosynthesis
D RM038 Deoxygenation (dehydration and reduction) in deoxysugar biosynthesis
E M00798 dTDP-L-mycarose biosynthesis
E M00799 dTDP-L-oleandrose biosynthesis
E M00801 dTDP-L-olivose biosynthesis
E M00802 dTDP-D-forosamine biosynthesis
C Sugar conversion
D RM040 Sugar activation and nucleotide sugar interconversion
D RM041 Inversion of the carbon chain
B
B Aromatics degradation
C Methyl to carboxyl conversion on aromatic ring
D RM003 Methyl to carboxyl conversion on aromatic ring
E M00538 Toluene degradation, toluene => benzoate
E M00537 Xylene degradation, xylene => methylbenzoate
E M00419 Cymene degradation, p-cymene => p-cumate
D RM015 Methyl to carboxyl conversion on aromatic ring, anaerobic
E M00418 Toluene degradation, anaerobic, toluene => benzoyl-CoA
C Dihydroxylation of aromatic ring
D RM004 Dihydroxylation of aromatic ring, type 1 (dioxygenase and dehydrogenase reactions)
E M00547 Benzene/toluene degradation, benzene => catechol / toluene => 3-methylcatechol
D RM005 Dihydroxylation of aromatic ring, type 1a (dioxygenase and decarboxylating dehydrogenase reactions)
E M00551 Benzoate degradation, benzoate => catechol
D RM902 Dihydroxylation of aromatic ring, type 1b (single dioxygenase reaction)
D RM006 Dihydroxylation of aromatic ring, type 2 (two monooxygenase reactions)
E M00548 Benzene degradation, benzene => catechol
D RM007 Dihydroxylation of aromatic ring, type 3 (dealkylation and monooxygenase reactions)
C Cleavage of aromatic ring
D RM008 Ortho-cleavage of dihydroxylated aromatic ring
E M00568 Catechol ortho-cleavage, catechol => 3-oxoadipate
D RM009 Meta-cleavage of dihydroxylated aromatic ring
E M00569 Catechol meta-cleavage, catechol => acetyl-CoA / 4-methylcatechol => propanoyl-CoA
E M00545 Trans-cinnamate degradation, trans-cinnamate => acetyl-CoA
D RM013 Ortho-cleavage of halogenated aromatic ring
D RM016 Ring cleavage via beta oxidation, anaerobic
E M00540 Benzoate degradation, cyclohexanecarboxylic acid =>pimeloyl-CoA
D RM017 Ring cleavage via Baeyer-Villiger oxidation
C Dihydroxylation and cleavage of aromatic ring
D RM010 Dihydroxylation and meta-cleavage of aromatic ring, type 1
E M00539 Cumate degradation, p-cumate => 2-oxopent-4-enoate + 2-methylpropanoate
E M00545 Trans-cinnamate degradation, trans-cinnamate => 2-oxopent-4-enoate + fumarate
E M00543 Biphenyl degradation, biphenyl => 2-oxopent-4-enoate + benzoate
D RM011 Dihydroxylation and meta-cleavage of aromatic ring, type 1b
E M00544 Carbazole degradation, carbazole => 2-oxopent-4-enoate + anthranilate
D RM012 Dihydroxylation and meta-cleavage of aromatic ring, type 3a
E M00533 Homoprotocatechuate degradation, homoprotocatechuate => 2-oxohept-3-enedioate
D RM014 Ring removal from polycyclic aromatic ring
E M00534 Naphthalene degradation, naphthalene => salicylate
B
B Other
C Amino acid metabolism
D RM025 Conversion of amino acid moiety to carboxyl group (biogenic amine metabolism)
C Nucleotide metabolism
D RM045 Conversion of base / nucleoside / nucleotide
D RM024 Pyrimidine degradation
E M00046 Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate
C Sugar metabolism
D RM034 Sugar degradation to aldehyde and pyruvate
E M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate
C Aromatics metabolism
D RM027 Hydroxylation and methylation motif
D RM026 Hydroxylation and decarboxylation motif
D RM028 Flavonoid synthesis
D RM029 Pterocarpan synthesis
D RM031 Oxime to acetate conversion
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#Last updated: August 14, 2025