|
KO |
Eukaryotic type
|
SSBR (single strand breaks repair)
|
Direct repair
|
BER (base exicision repair)
|
DNA glycosylases
|
AP endonucleases
|
Long Patch-BER factors
|
DNA polymerase delta complex
|
DNA polymerase epsilon complex
|
DICSQDRAFT_72222 proliferating cell nuclear antigen
|
K04802 PCNA; proliferating cell nuclear antigen |
DICSQDRAFT_82849 PIN domain-like protein
|
K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] |
DICSQDRAFT_163166 PIN domain-like protein
|
K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] |
DICSQDRAFT_164573 ATP-dependent DNA ligase
|
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] |
Short Patch-BER factors
|
Other BER factors
|
NER (nucleotide excision repair)
|
GGR (global genome repair) factors
|
TCR (transcription coupled repair) factors
|
TFIIH complex
|
RPA (replication factor A)
|
Other NER factors
|
DICSQDRAFT_47366 DNA repair protein
DICSQDRAFT_101514 DNA repair protein rad10
DICSQDRAFT_87823 hypothetical protein
DICSQDRAFT_144639 PIN domain-like protein
DICSQDRAFT_164573 ATP-dependent DNA ligase
DICSQDRAFT_148678 ARM repeat-containing protein
DICSQDRAFT_100428 Cullin-domain-containing protein
DICSQDRAFT_86092 POZ domain-containing protein
DICSQDRAFT_177623 hypothetical protein
|
K10847 XPA; DNA-repair protein complementing XP-A cells
K10849 ERCC1; DNA excision repair protein ERCC-1
K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
K10846 ERCC5; DNA excision repair protein ERCC-5
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
K15075 MET18; DNA repair/transcription protein MET18/MMS19
K03869 CUL3; cullin 3
K03872 ELOC; elongin-C
K15077 ELA1; elongin-A
|
MMR (mismatch excision repair)
|
Mismatch and loop recognition factors
|
MutL homologs
|
DNA polymerase delta complex
|
RPA (replication factor A)
|
RFC (replication factor C)
|
Other MMR factors
|
DICSQDRAFT_72222 proliferating cell nuclear antigen
DICSQDRAFT_64305 PIN domain-like protein
DICSQDRAFT_164573 ATP-dependent DNA ligase
DICSQDRAFT_152018 WD40 repeat-like protein
|
K04802 PCNA; proliferating cell nuclear antigen
K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
K24755 WDR76; WD repeat-containing protein 76
|
DSBR (double strand breaks repair)
|
TLS (translesion DNA synthesis) factors
|
Check point factors
|
Other factors with a suspected DNA repair function
|
|
|
Prokaryotic type
|