| |
KO |
 Eukaryotic type
|
SSBR (single strand breaks repair)
|
 Direct repair
|
BER (base exicision repair)
|
DNA glycosylases
|
 AP endonucleases
|
Long Patch-BER factors
|
DNA polymerase delta complex
DNA polymerase epsilon complex
OE_4165R pcn; DNA polymerase sliding clamp
OE_2939R fen1; flap endonuclease Fen1
OE_2298F ligB; DNA ligase (ATP)
|
K04802 PCNA; proliferating cell nuclear antigen
K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
|
Short Patch-BER factors
|
Other BER factors
|
NER (nucleotide excision repair)
|
GGR (global genome repair) factors
|
TCR (transcription coupled repair) factors
|
TFIIH complex
|
RPA (replication factor A)
|
Other NER factors
|
OE_2298F ligB; DNA ligase (ATP)
|
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
|
MMR (mismatch excision repair)
|
Mismatch and loop recognition factors
|
MutL homologs
|
DNA polymerase delta complex
|
RPA (replication factor A)
|
RFC (replication factor C)
|
Other MMR factors
|
OE_4165R pcn; DNA polymerase sliding clamp
OE_2298F ligB; DNA ligase (ATP)
|
K04802 PCNA; proliferating cell nuclear antigen
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
|
DSBR (double strand breaks repair)
|
TLS (translesion DNA synthesis) factors
|
Check point factors
|
Other factors with a suspected DNA repair function
|
|
|
Prokaryotic type
|
DNA Repair and Recombination Proteins - Halobacterium salinarum R1