SSDB Best Search Result

Entry:mmt:Metme_4402 (154 a.a.)
Name:DNA polymerase III chi subunit HolC
KO:K02339 DNA polymerase III subunit chi

Search Result : 98 hits (reference genome only)

                 Entry                                       KO      len   SW-score  identity  overlap  
------------------------------------------------------------------ -------------------------------------
lpn:lpg2632 DNA polymerase III, chi subunit             K02339     144      329     0.379      140     
cja:CJA_1447 DNA polymerase III, chi subunit            K02339     139      322     0.397      141     
ppu:PP_0979 DNA polymerase III subunit chi              K02339     142      305     0.359      142     
alv:Alvin_1215 DNA polymerase III chi subunit HolC      K02339     143      292     0.355      141     
mca:MCA2098 putative DNA polymerase III, chi subunit    K02339     152      280     0.319      135     
avn:Avin_11640 DNA polymerase III chi subunit, HolC     K02339     142      276     0.348      141     
bxe:Bxe_A3637 Putative DNA polymerase III chi subunit   K02339     138      276     0.382      123     
csa:Csal_2921 DNA polymerase III chi subunit, HolC      K02339     150      265     0.314      137     
bps:BPSL0966 putative DNA polymerase III chi subunit    K02339     138      265     0.362      127     
pfl:PFL_1065 DNA polymerase III, chi subunit            K02339     142      264     0.326      141     
bma:BMA0673 DNA polymerase III, chi subunit, putative   K02339     138      263     0.362      127     
neu:NE0442 putative DNA polymerase III (chi subunit) pr K02339     129      259     0.344      125     
sml:Smlt0674 putative DNA polymerase                    K02339     141      255     0.291      141     
abo:ABO_0494 DNA polymerase III, chi subunit            K02339     148      255     0.284      141     
brh:RBRH_03149 DNA polymerase III, chi subunit (EC 2.7. K02339     138      252     0.361      122     
son:SO_3423 DNA polymerase III chi subunit HolC         K02339     154      251     0.290      145     
xfa:XF_0136 DNA polymerase III holoenzyme chi subunit   K02339     141      250     0.301      143     
reu:Reut_A2682 DNA polymerase III chi subunit, HolC     K02339     144      247     0.346      133     
pae:PA3832 DNA polymerase III subunit chi               K02339     142      244     0.291      141     
cdn:BN940_05496 DNA polymerase III chi subunit          K02339     153      242     0.312      138     
ngo:NGO_1226 DNA polymerase III subunit chi             K02339     146      240     0.302      149     
reh:H16_A2989 DNA polymerase III chi subunit            K02339     144      239     0.352      128     
psb:Psyr_1090 DNA polymerase III, chi subunit           K02339     142      239     0.308      143     
pst:PSPTO_1270 DNA polymerase III, chi subunit          K02339     142      239     0.298      141     
hel:HELO_1355 DNA polymerase 3 chi subunit              K02339     151      238     0.295      149     
nme:NMB1568 putative DNA polymerase holoenzyme chi subu K02339     146      235     0.325      151     
rso:RSc2414 probable dna polymerase III (chi subunit) p K02339     142      232     0.352      125     
hdu:HD_0667 DNA polymerase III chi subunit              K02339     153      229     0.301      143     
cps:CPS_0739 DNA polymerase III, chi subunit            K02339     157      228     0.289      142     
eba:ebA7175 DNA polymerase III, chi subunit             K02339     145      225     0.345      113     
vfi:VF_0412 DNA polymerase III, chi subunit             K02339     147      221     0.317      139     
afr:AFE_2203 DNA polymerase III, chi subunit            K02339     141      219     0.274      146     
xom:XOO0758 DNA polymerase III holoenzyme chi subunit   K02339     141      217     0.270      141     
apl:APL_1505 DNA polymerase III subunit chi             K02339     145      216     0.297      148     
xac:XAC3558 DNA polymerase III holoenzyme chi subunit   K02339     141      216     0.270      141     
acb:A1S_0226 DNA polymerase III chi subunit             K02339     135      214     0.303      142     
aci:ACIAD0252 DNA polymerase III, chi subunit           K02339     135      213     0.284      141     
xcc:XCC0648 DNA polymerase III holoenzyme chi subunit   K02339     141      208     0.262      141     
bpe:BP2422 conserved hypothetical protein               K02339     151      204     0.300      130     
hin:HI_1397 DNA polymerase III, chi subunit (holC)      K02339     144      203     0.284      141     
pmr:PMI3463 DNA polymerase III, chi subunit             K02339     149      201     0.275      142     
vvu:VV1_1475 DNA polymerase III chi subunit             K02339     149      199     0.271      144     
plu:plu4482 DNA polymerase III, chi subunit             K02339     149      197     0.275      142     
yen:YE0499 DNA polymerase III, chi subunit              K02339     149      193     0.272      147     
yps:YPTB0530 DNA polymerase III, chi subunit            K02339     149      193     0.272      147     
ypk:y0745 DNA polymerase III, chi subunit               K02339     158      193     0.272      147     
ype:YPO3442 DNA polymerase III, chi subunit             K02339     149      193     0.272      147     
pmu:PM0822 HolC                                         K02339     142      191     0.263      137     
vpa:VP2645 DNA polymerase III, chi subunit              K02339     149      190     0.272      147     
azc:AZC_0540 DNA polymerase III chi subunit             K02339     149      189     0.278      151     
sme:SMc00586 Putative DNA polymerase III chi subunit    K02339     149      188     0.260      154     
eca:ECA0403 DNA polymerase III, chi subunit             K02339     149      186     0.252      147     
smar:SM39_4832 DNA polymerase III, chi subunit          K02339     149      184     0.264      144     
enc:ECL_04595 DNA polymerase III subunit chi            K02339     147      184     0.284      148     
cvi:CV_2913 DNA polymerase III, chi subunit             K02339     141      184     0.296      125     
xau:Xaut_1459 DNA polymerase III chi subunit HolC       K02339     153      182     0.290      155     
kpn:KPN_04664 DNA polymerase III subunit chi            K02339     147      182     0.265      147     
ddd:Dda3937_01297 DNA polymerase III, chi subunit       K02339     149      181     0.257      144     
esa:ESA_03446 hypothetical protein                      K02339     153      181     0.272      147     
pam:PANA_0496 HolC                                      K02339     152      176     0.269      145     
sty:STY4815 DNA polymerase III, chi subunit             K02339     160      176     0.277      148     
stm:STM4476 DNA polymerase III, chi subunit             K02339     160      176     0.277      148     
vch:VC_2502 DNA polymerase III, chi subunit             K02339     149      172     0.272      147     
sfl:SF4230 DNA polymerase III subunit chi               K02339     147      170     0.270      148     
sno:Snov_1098 DNA polymerase III chi subunit HolC       K02339     148      169     0.248      149     
rru:Rru_A2200 DNA polymerase III, chi subunit           K02339     160      168     0.272      151     
ecs:ECs_5236 DNA polymerase III chi subunit HolC        K02339     147      168     0.270      148     
eco:b4259 DNA polymerase III subunit chi                K02339     147      168     0.262      145     
cro:ROD_33251 DNA polymerase III, chi subunit           K02339     147      166     0.264      148     
eam:EAMY_0375 DNA polymerase III, chi subunit           K02339     151      162     0.264      148     
rpa:TX73_015825 DNA polymerase III subunit chi          K02339     150      159     0.255      149     
mlo:mlr7869 unknown protein                             K02339     149      156     0.281      135     
ret:RHE_CH01457 putative DNA polymerase III, chi subuni K02339     149      152     0.269      156     
rle:RL1572 putative DNA polymerase III subunit          K02339     149      146     0.293      157     
ftu:FTT_0298 DNA polymerase III (CHI subunit) protein   K02339     146      145     0.259      143     
bja:blr4109 ORF_ID:blr4109; hypothetical protein        K02339     150      142     0.258      151     
atu:Atu1111 DNA polymerase III subunit chi              K02339     149      142     0.248      149     
mea:Mex_1p5105 conserved hypothetical protein           K02339     150      139     0.243      152     
rcp:RCAP_rcc02696 DNA polymerase III, chi subunit       K02339     150      134     0.228      149     
rsp:RSP_2898 DNA polymerase III, chi subunit            K02339     152      132     0.244      156     
sil:SPO2452 DNA polymerase III, chi subunit, putative   K02339     154      125     0.236      110     
bhe:BH05460 hypothetical protein                        K02339     154      123     0.252      131     
ccr:CC_1693 DNA polymerase III, chi subunit, putative   K02339     153      122     0.233      133     
bmf:BAB1_0711 DNA polymerase III chi subunit, HolC      K02339     149      120     0.244      131     
bms:BR0690 conserved hypothetical protein               K02339     149      120     0.244      131     
bme:BMEI1260 DNA polymerase iii, chi subunit            K02339     165      120     0.244      131     
rco:RC1346 unknown                                      K02339     154      119     0.252      131     
rpr:RP872 unknown                                       K02339     165      115     0.286      91      
ani:ANIA_00633 hypothetical protein                                533      111     0.282      117     
aor:AO090005000977 unnamed protein product; predicted p            556      111     0.284      109     
gox:GOX0292 DNA polymerase III, chi subunit             K02339     147      111     0.237      131     
cge:100761729 perforin-1                                K07818     555      109     0.237      114     
rno:50669 perforin-1 precursor                          K07818     554      109     0.263      114     
clv:102091944 leucine-rich repeat-containing protein 56 K25425     668      107     0.295      78      
ctt:CtCNB1_2859 DNA polymerase III chi subunit, HolC    K02339      77      103     0.314      51      
mva:Mvan_5556 transcriptional repressor, CopY family               124      102     0.248      121     
nta:107832484 uncharacterized protein LOC107832484                 130       96     0.295      61      
vg:25479061 Scale drop disease virus; ORF_012R                     125       95     0.286      77      

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]