PATHWAY: lcf00230 Help
Entry
Name
Purine metabolism - Lates calcarifer (barramundi perch)
Class
Metabolism; Nucleotide metabolism
BRITE hierarchy
Pathway map
Ortholog table
Module
lcf_M00053 Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:lcf00230 ]
Other DBs
Organism
Lates calcarifer (barramundi perch) [GN:
lcf ]
Gene
108884858 dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1B [KO:K13755 ] [EC:3.1.4.17 ]
108883289 pde1cb; dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A isoform X1 [KO:K13755 ] [EC:3.1.4.17 ]
108899934 LOW QUALITY PROTEIN: dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C-like [KO:K13755 ] [EC:3.1.4.17 ]
108899938 dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C-like [KO:K13755 ] [EC:3.1.4.17 ]
108897631 dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A isoform X1 [KO:K13755 ] [EC:3.1.4.17 ]
108898764 dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C isoform X2 [KO:K13755 ] [EC:3.1.4.17 ]
108879789 dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A [KO:K13755 ] [EC:3.1.4.17 ]
108880371 LOW QUALITY PROTEIN: cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha'-like [KO:K13757 ] [EC:3.1.4.35 ]
108888328 retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta [KO:K13758 ]
108900705 pde6d; retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta [KO:K13758 ]
108876837 pde6gb; phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog b [KO:K13759 ]
108902623 pde6ga; retinal cone rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma [KO:K13759 ]
108877587 retinal cone rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma [KO:K13760 ]
108875877 retinal cone rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma [KO:K13760 ]
108894331 retinal cone rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma-like [KO:K13760 ]
108894332 retinal cone rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma-like [KO:K13760 ]
108894333 retinal cone rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma-like [KO:K13760 ]
108894404 retinal cone rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma [KO:K13760 ]
108894405 retinal cone rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma-like [KO:K13760 ]
108875876 retinal cone rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma [KO:K13760 ]
108901277 si:dkey-219c10.4; high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A isoform X1 [KO:K13761 ] [EC:3.1.4.35 ]
108886395 pde9ac; high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A isoform X1 [KO:K13761 ] [EC:3.1.4.35 ]
108897138 pde9aa; high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A isoform X1 [KO:K13761 ] [EC:3.1.4.35 ]
108878667 ectonucleoside triphosphate diphosphohydrolase 2 [KO:K01509 ] [EC:3.6.1.-]
108894434 LOW QUALITY PROTEIN: ectonucleoside triphosphate diphosphohydrolase 2 [KO:K01509 ] [EC:3.6.1.-]
108895465 high affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8B [KO:K18437 ] [EC:3.1.4.53 ]
108887926 high affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8A [KO:K18437 ] [EC:3.1.4.53 ]
Compound
C00053 3'-Phosphoadenylyl sulfate
C00054 Adenosine 3',5'-bisphosphate
C00119 5-Phospho-alpha-D-ribose 1-diphosphate
C00620 alpha-D-Ribose 1-phosphate
C00655 Xanthosine 5'-phosphate
C01228 Guanosine 3',5'-bis(diphosphate)
C01260 P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261 P1,P4-Bis(5'-guanosyl) tetraphosphate
C03373 Aminoimidazole ribotide
C03483 Adenosine tetraphosphate
C03614 Inosine 5'-tetraphosphate
C03794 N6-(1,2-Dicarboxyethyl)-AMP
C03838 5'-Phosphoribosylglycinamide
C04051 5-Amino-4-imidazolecarboxyamide
C04376 5'-Phosphoribosyl-N-formylglycinamide
C04392 P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494 Guanosine 3'-diphosphate 5'-triphosphate
C04640 2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677 1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734 1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751 1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823 1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05515 5-Ureido-4-imidazole carboxylate
C05516 5-Amino-4-imidazole carboxylate
C06196 2'-Deoxyinosine 5'-phosphate
C06197 P1,P3-Bis(5'-adenosyl) triphosphate
C06433 5'-Benzoylphosphoadenosine
C06435 5'-Butyrylphosphoinosine
C12248 5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667 5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395 N6-Succino-2-amino-2'-deoxyadenylate
Reference
Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
Journal
Reference
Authors
Xi H, Schneider BL, Reitzer L.
Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
Journal
Related pathway
lcf00250 Alanine, aspartate and glutamate metabolism
lcf00260 Glycine, serine and threonine metabolism
lcf00630 Glyoxylate and dicarboxylate metabolism
KO pathway
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