KEGG   PATHWAY: blm00970
Entry
blm00970                    Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Bifidobacterium longum subsp. longum JCM 1217
Class
Genetic Information Processing; Translation
Pathway map
blm00970  Aminoacyl-tRNA biosynthesis
blm00970

Organism
Bifidobacterium longum subsp. longum JCM 1217 [GN:blm]
Gene
BLLJ_tRNA01  tRNA-Ala [KO:K14218]
BLLJ_tRNA23  tRNA-Ala [KO:K14218]
BLLJ_tRNA24  tRNA-Ala [KO:K14218]
BLLJ_tRNA43  tRNA-Ala [KO:K14218]
BLLJ_tRNA72  tRNA-Ala [KO:K14218]
BLLJ_tRNA11  tRNA-Arg [KO:K14219]
BLLJ_tRNA33  tRNA-Arg [KO:K14219]
BLLJ_tRNA39  tRNA-Arg [KO:K14219]
BLLJ_tRNA32  tRNA-Arg [KO:K14219]
BLLJ_tRNA44  tRNA-Arg [KO:K14219]
BLLJ_tRNA18  tRNA-Arg [KO:K14219]
BLLJ_tRNA36  tRNA-Arg [KO:K14219]
BLLJ_tRNA57  tRNA-Arg [KO:K14219]
BLLJ_tRNA26  tRNA-Arg [KO:K14219]
BLLJ_tRNA27  tRNA-Arg [KO:K14219]
BLLJ_tRNA53  tRNA-Asn [KO:K14220]
BLLJ_tRNA55  tRNA-Asn [KO:K14220]
BLLJ_tRNA54  tRNA-Asn [KO:K14220]
BLLJ_tRNA59  tRNA-Asp [KO:K14221]
BLLJ_tRNA61  tRNA-Asp [KO:K14221]
BLLJ_tRNA51  tRNA-Cys [KO:K14222]
BLLJ_tRNA25  tRNA-Gln [KO:K14223]
BLLJ_tRNA06  tRNA-Gln [KO:K14223]
BLLJ_tRNA34  tRNA-Gln [KO:K14223]
BLLJ_tRNA30  tRNA-Gln [KO:K14223]
BLLJ_tRNA05  tRNA-Glu [KO:K14224]
BLLJ_tRNA62  tRNA-Glu [KO:K14224]
BLLJ_tRNA12  tRNA-Gly [KO:K14225]
BLLJ_tRNA48  tRNA-Gly [KO:K14225]
BLLJ_tRNA52  tRNA-Gly [KO:K14225]
BLLJ_tRNA42  tRNA-Gly [KO:K14225]
BLLJ_tRNA29  tRNA-Gly [KO:K14225]
BLLJ_tRNA04  tRNA-Gly [KO:K14225]
BLLJ_tRNA70  tRNA-Gly [KO:K14225]
BLLJ_tRNA19  tRNA-His [KO:K14226]
BLLJ_tRNA02  tRNA-Ile [KO:K14227]
BLLJ_tRNA03  tRNA-Leu [KO:K14228]
BLLJ_tRNA16  tRNA-Leu [KO:K14228]
BLLJ_tRNA21  tRNA-Leu [KO:K14228]
BLLJ_tRNA37  tRNA-Leu [KO:K14228]
BLLJ_tRNA20  tRNA-Leu [KO:K14228]
BLLJ_tRNA28  tRNA-Leu [KO:K14228]
BLLJ_tRNA41  tRNA-Lys [KO:K14229]
BLLJ_tRNA08  tRNA-Lys [KO:K14229]
BLLJ_tRNA09  tRNA-Lys [KO:K14229]
BLLJ_tRNA10  tRNA-Met [KO:K14230]
BLLJ_tRNA58  tRNA-Met [KO:K14230]
BLLJ_tRNA67  tRNA-Met [KO:K14230]
BLLJ_tRNA31  tRNA-Met [KO:K14230]
BLLJ_tRNA40  tRNA-Phe [KO:K14231]
BLLJ_tRNA60  tRNA-Phe [KO:K14231]
BLLJ_tRNA22  tRNA-Pro [KO:K14232]
BLLJ_tRNA47  tRNA-Pro [KO:K14232]
BLLJ_tRNA63  tRNA-Pro [KO:K14232]
BLLJ_tRNA35  tRNA-Ser [KO:K14233]
BLLJ_tRNA64  tRNA-Ser [KO:K14233]
BLLJ_tRNA66  tRNA-Ser [KO:K14233]
BLLJ_tRNA07  tRNA-Ser [KO:K14233]
BLLJ_tRNA65  tRNA-Ser [KO:K14233]
BLLJ_tRNA15  tRNA-Thr [KO:K14234]
BLLJ_tRNA17  tRNA-Thr [KO:K14234]
BLLJ_tRNA68  tRNA-Thr [KO:K14234]
BLLJ_tRNA45  tRNA-Thr [KO:K14234]
BLLJ_tRNA73  tRNA-Thr [KO:K14234]
BLLJ_tRNA71  tRNA-Trp [KO:K14235]
BLLJ_tRNA38  tRNA-Trp [KO:K14235]
BLLJ_tRNA46  tRNA-Tyr [KO:K14236]
BLLJ_tRNA69  tRNA-Tyr [KO:K14236]
BLLJ_tRNA13  tRNA-Val [KO:K14237]
BLLJ_tRNA50  tRNA-Val [KO:K14237]
BLLJ_tRNA56  tRNA-Val [KO:K14237]
BLLJ_tRNA14  tRNA-Val [KO:K14237]
BLLJ_tRNA49  tRNA-Val [KO:K14237]
BLLJ_0166  glutamyl-tRNA synthase [KO:K01885] [EC:6.1.1.17]
BLLJ_0230  aspartyl/glutamyl-tRNA amidotransferase subunit A [KO:K02433] [EC:6.3.5.6 6.3.5.7]
BLLJ_0231  aspartyl/glutamyl-tRNA amidotransferase subunit B [KO:K02434] [EC:6.3.5.6 6.3.5.7]
BLLJ_0229  aspartyl/glutamyl-tRNA amidotransferase subunit C [KO:K02435] [EC:6.3.5.6 6.3.5.7]
BLLJ_0739  alanyl-tRNA synthase [KO:K01872] [EC:6.1.1.7]
BLLJ_1432  aspartyl-tRNA synthase [KO:K01876] [EC:6.1.1.12]
BLLJ_1329  glycyl-tRNA synthase [KO:K01880] [EC:6.1.1.14]
BLLJ_1089  threonyl-tRNA synthase [KO:K01868] [EC:6.1.1.3]
BLLJ_1628  seryl-tRNA synthase [KO:K01875] [EC:6.1.1.11]
BLLJ_0311  cysteinyl-tRNA synthase [KO:K01883] [EC:6.1.1.16]
BLLJ_1830  methionyl-tRNA synthase [KO:K01874] [EC:6.1.1.10]
BLLJ_1475  methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
BLLJ_0240  valyl-tRNA synthase [KO:K01873] [EC:6.1.1.9]
BLLJ_1149  leucyl-tRNA synthase [KO:K01869] [EC:6.1.1.4]
BLLJ_1483  isoleucyl-tRNA synthase [KO:K01870] [EC:6.1.1.5]
BLLJ_1610  lysyl-tRNA synthase [KO:K04567] [EC:6.1.1.6]
BLLJ_1758  arginyl-tRNA synthase [KO:K01887] [EC:6.1.1.19]
BLLJ_1533  prolyl-tRNA synthase [KO:K01881] [EC:6.1.1.15]
BLLJ_1433  histidyl-tRNA synthase [KO:K01892] [EC:6.1.1.21]
BLLJ_0557  phenylalanyl-tRNA synthase alpha subunit [KO:K01889] [EC:6.1.1.20]
BLLJ_0558  phenylalanyl-tRNA synthase beta subunit [KO:K01890] [EC:6.1.1.20]
BLLJ_0574  tyrosyl-tRNA synthase [KO:K01866] [EC:6.1.1.1]
BLLJ_0047  tryptophanyl-tRNA synthase [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
blm00250  Alanine, aspartate and glutamate metabolism
blm00260  Glycine, serine and threonine metabolism
blm00270  Cysteine and methionine metabolism
blm00290  Valine, leucine and isoleucine biosynthesis
blm00300  Lysine biosynthesis
blm00330  Arginine and proline metabolism
blm00340  Histidine metabolism
blm00380  Tryptophan metabolism
blm00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   
LinkDB

DBGET integrated database retrieval system