KEGG   PATHWAY: cide03022
Entry
cide03022                   Pathway                                
Name
Basal transcription factors - Ctenopharyngodon idella (grass carp)
Class
Genetic Information Processing; Transcription
Pathway map
cide03022  Basal transcription factors
cide03022

Other DBs
GO: 0005668 0005669 0005672 0005673 0005674 0005675
Organism
Ctenopharyngodon idella (grass carp) [GN:cide]
Gene
127502272  transcription initiation factor IIA subunit 1 isoform X1 [KO:K03122]
127524592  TFIIA-alpha and beta-like factor isoform X1 [KO:K03122]
127516050  transcription initiation factor IIA subunit 2 [KO:K03123]
127495554  transcription initiation factor IIB [KO:K03124]
127498261  transcription initiation factor IIB [KO:K03124]
127525207  TATA-box-binding protein [KO:K03120]
127504577  TATA box-binding protein-like 1 [KO:K03120]
127498212  TATA box-binding protein-like 2 isoform X1 [KO:K03120]
127512931  transcription initiation factor TFIID subunit 1 isoform X1 [KO:K03125] [EC:2.3.1.48 2.7.11.1]
127497117  transcription initiation factor TFIID subunit 2 isoform X1 [KO:K03128]
127494383  transcription initiation factor TFIID subunit 7 isoform X1 [KO:K03132]
127505068  transcription initiation factor TFIID subunit 8 [KO:K14649]
127510828  transcription initiation factor TFIID subunit 3 [KO:K14650]
127517753  transcription initiation factor TFIID subunit 10 [KO:K03134]
127508022  transcription initiation factor TFIID subunit 5 [KO:K03130]
127516265  TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L [KO:K03130]
127506619  si:dkey-219c3.2; transcription initiation factor TFIID subunit 4 isoform X1 [KO:K03129]
127499961  transcription initiation factor TFIID subunit 4 isoform X1 [KO:K03129]
127522117  transcription initiation factor TFIID subunit 4 isoform X1 [KO:K03129]
127502391  transcription initiation factor TFIID subunit 4 [KO:K03129]
127496940  transcription initiation factor TFIID subunit 12 [KO:K03126]
127515205  TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L [KO:K03131]
127512664  transcription initiation factor TFIID subunit 6 isoform X1 [KO:K03131]
127503941  transcription initiation factor TFIID subunit 9 [KO:K14535]
127504441  transcription initiation factor TFIID subunit 11 [KO:K03135]
127504503  transcription initiation factor TFIID subunit 13 [KO:K03127]
127518938  general transcription factor IIE subunit 1 [KO:K03136]
127494445  transcription initiation factor IIE subunit beta [KO:K03137]
127509618  general transcription factor IIF subunit 1 isoform X1 [KO:K03138]
127510000  general transcription factor IIF subunit 2 isoform X1 [KO:K03139] [EC:5.6.2.-]
127519126  general transcription factor IIF subunit 2b [KO:K03139] [EC:5.6.2.-]
127507568  general transcription factor IIH subunit 1 [KO:K03141]
127512097  general transcription factor IIH subunit 2 [KO:K03142]
127513248  general transcription factor IIH subunit 3 isoform X1 [KO:K03143]
127500517  LOW QUALITY PROTEIN: general transcription factor IIH subunit 4 [KO:K03144]
127514408  general transcription and DNA repair factor IIH helicase subunit XPB [KO:K10843] [EC:5.6.2.4]
127495872  general transcription and DNA repair factor IIH helicase subunit XPD [KO:K10844] [EC:5.6.2.3]
127502488  general transcription factor IIH subunit 5 [KO:K10845]
127513513  cyclin-dependent kinase 7 [KO:K02202] [EC:2.7.11.22 2.7.11.23]
127524837  CDK-activating kinase assembly factor MAT1 [KO:K10842]
127512024  cyclin-H [KO:K06634]
Reference
PMID:16858867
  Authors
Thomas MC, Chiang CM
  Title
The general transcription machinery and general cofactors.
  Journal
Crit Rev Biochem Mol Biol 41:105-78 (2006)
DOI:10.1080/10409230600648736
Reference
PMID:12516863
  Authors
Martinez E
  Title
Multi-protein complexes in eukaryotic gene transcription.
  Journal
Plant Mol Biol 50:925-47 (2002)
DOI:10.1023/A:1021258713850
Reference
PMID:19308322
  Authors
Cler E, Papai G, Schultz P, Davidson I
  Title
Recent advances in understanding the structure and function of general transcription factor TFIID.
  Journal
Cell Mol Life Sci 66:2123-34 (2009)
DOI:10.1007/s00018-009-0009-3
Reference
PMID:10838567
  Authors
Malik S, Roeder RG.
  Title
Transcriptional regulation through Mediator-like coactivators in yeast and metazoan cells.
  Journal
Trends Biochem Sci 25:277-283 (2000)
DOI:10.1016/S0968-0004(00)01596-6
Related
pathway
cide03020  RNA polymerase
cide03420  Nucleotide excision repair
KO pathway
ko03022   
LinkDB

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