KEGG   PATHWAY: dfo03440
Entry
dfo03440                    Pathway                                
Name
Homologous recombination - Dehalogenimonas formicexedens
Description
Homologous recombination (HR) is essential for the accurate repair of DNA double-strand breaks (DSBs), potentially lethal lesions. HR takes place in the late S-G2 phase of the cell cycle and involves the generation of a single-stranded region of DNA, followed by strand invasion, formation of a Holliday junction, DNA synthesis using the intact strand as a template, branch migration and resolution. It is investigated that RecA/Rad51 family proteins play a central role. The breast cancer susceptibility protein Brca2 and the RecQ helicase BLM (Bloom syndrome mutated) are tumor suppressors that maintain genome integrity, at least in part, through HR.
Class
Genetic Information Processing; Replication and repair
Pathway map
dfo03440  Homologous recombination
dfo03440

Other DBs
GO: 0000724
Organism
Dehalogenimonas formicexedens [GN:dfo]
Gene
Dform_00767  recJ; single-stranded-DNA-specific exonuclease [KO:K07462] [EC:3.1.-.-]
Dform_01038  single-stranded DNA-binding protein [KO:K03111]
Dform_00633  DNA replication and repair protein RecO [KO:K03584]
Dform_00637  DNA replication and repair protein RecR [KO:K06187]
Dform_02199  recombination protein RecA [KO:K03553]
Dform_01592  polA; DNA polymerase I [KO:K02335] [EC:2.7.7.7]
Dform_01170  ruvA; holliday junction DNA helicase RuvA [KO:K03550]
Dform_01715  ruvB; holliday junction DNA helicase RuvB [KO:K03551] [EC:5.6.2.4]
Dform_00269  ruvB; holliday junction DNA helicase RuvB [KO:K03551] [EC:5.6.2.4]
Dform_00951  ruvB; holliday junction DNA helicase RuvB [KO:K03551] [EC:5.6.2.4]
Dform_01950  ruvB; holliday junction DNA helicase RuvB [KO:K03551] [EC:5.6.2.4]
Dform_01152  ruvC; crossover junction endodeoxyribonuclease RuvC [KO:K01159] [EC:3.1.21.10]
Dform_00590  recG; ATP-dependent DNA helicase RecG [KO:K03655] [EC:5.6.2.4]
Dform_02161  dnaE; DNA polymerase III subunit alpha [KO:K02337] [EC:2.7.7.7]
Dform_00533  dnaN; DNA polymerase-3 subunit beta [KO:K02338] [EC:2.7.7.7]
Dform_01749  DNA polymerase III beta subunit, central domain [KO:K02338] [EC:2.7.7.7]
Dform_01774  DNA polymerase III sliding clamp (beta) subunit [KO:K02338] [EC:2.7.7.7]
Dform_02013  DNA polymerase III sliding clamp (beta) subunit [KO:K02338] [EC:2.7.7.7]
Dform_00304  DNA polymerase III beta subunit, central domain [KO:K02338] [EC:2.7.7.7]
Dform_00639  dnaX; DNA polymerase III subunit gamma/tau [KO:K02343] [EC:2.7.7.7]
Dform_00071  holA; DNA polymerase III, delta subunit [KO:K02340] [EC:2.7.7.7]
Dform_00684  holB; DNA polymerase III subunit delta' [KO:K02341] [EC:2.7.7.7]
Dform_02085  priA; replication restart DNA helicase PriA [KO:K04066] [EC:5.6.2.4]
Reference
  Authors
Maloisel L, Fabre F, Gangloff S.
  Title
DNA polymerase delta is preferentially recruited during homologous recombination to promote heteroduplex DNA extension.
  Journal
Mol Cell Biol 28:1373-82 (2008)
DOI:10.1128/MCB.01651-07
Reference
  Authors
Haruta-Takahashi N, Iwasaki H.
  Title
[Recombination mediators]
  Journal
Seikagaku 79:449-53 (2007)
Reference
  Authors
Ouyang KJ, Woo LL, Ellis NA.
  Title
Homologous recombination and maintenance of genome integrity: Cancer and aging through the prism of human RecQ helicases.
  Journal
Mech Ageing Dev 129:425-40 (2008)
DOI:10.1016/j.mad.2008.03.003
Reference
  Authors
Kawabata M, Kawabata T, Nishibori M.
  Title
Role of recA/RAD51 family proteins in mammals.
  Journal
Acta Med Okayama 59:1-9 (2005)
DOI:10.18926/AMO/31987
Reference
  Authors
Prado F, Cortes-Ledesma F, Huertas P, Aguilera A.
  Title
Mitotic recombination in Saccharomyces cerevisiae.
  Journal
Curr Genet 42:185-98 (2003)
DOI:10.1007/s00294-002-0346-3
Reference
  Authors
Heyer WD, Li X, Rolfsmeier M, Zhang XP.
  Title
Rad54: the Swiss Army knife of homologous recombination?
  Journal
Nucleic Acids Res 34:4115-25 (2006)
DOI:10.1093/nar/gkl481
Reference
  Authors
Michel B, Boubakri H, Baharoglu Z, LeMasson M, Lestini R.
  Title
Recombination proteins and rescue of arrested replication forks.
  Journal
DNA Repair (Amst) 6:967-80 (2007)
DOI:10.1016/j.dnarep.2007.02.016
KO pathway
ko03440   
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