KEGG   PATHWAY: lruf05164
Entry
lruf05164                   Pathway                                
Name
Influenza A - Lynx rufus (bobcat)
Description
Influenza is a contagious respiratory disease caused by influenza virus infection. Influenza A virus is responsible for both annual seasonal epidemics and periodic worldwide pandemics. Novel strains that cause pandemics arise from avian influenza virus by genetic reassortment among influenza viruses and two surface glycoproteins HA and NA form the basis of serologically distinct virus types. The innate immune system recognizes invaded virus through multiple mechanisms. Viral non-structural NS1 protein is a multifunctional virulence factor that interfere IFN-mediated antiviral response. It inhibits IFN production by blocking activation of transcription factors such as NF-kappa B and IRF3. NS1 further inhibits the activation of IFN-induced antiviral genes. PB1-F2 protein is another virulence factor that induce apoptosis of infected cells, which results in life-threatening bronchiolitis.
Class
Human Diseases; Infectious disease: viral
Pathway map
lruf05164  Influenza A
lruf05164

Organism
Lynx rufus (bobcat) [GN:lruf]
Gene
124528660  plasminogen isoform X1 [KO:K01315] [EC:3.4.21.7]
124523488  serine protease 1 [KO:K01312] [EC:3.4.21.4]
124523596  anionic trypsin isoform X1 [KO:K01312] [EC:3.4.21.4]
124527323  transmembrane protease serine 2-like [KO:K09633] [EC:3.4.21.122]
124505868  transmembrane protease serine 4-like [KO:K09635] [EC:3.4.21.-]
124521067  transmembrane protease serine 11D-like [KO:K09641] [EC:3.4.21.-]
124517730  protein kinase C beta type isoform X1 [KO:K19662] [EC:2.7.11.13]
124518197  2'-5'-oligoadenylate synthase 3-like isoform X1 [KO:K14216] [EC:2.7.7.84]
124518198  2'-5'-oligoadenylate synthase 1-like isoform X1 [KO:K14216] [EC:2.7.7.84]
124518368  2'-5'-oligoadenylate synthase 2-like isoform X1 [KO:K14216] [EC:2.7.7.84]
124510142  2-5A-dependent ribonuclease-like [KO:K01165]
124523242  dnaJ homolog subfamily B member 1 [KO:K09507]
124513269  dnaJ homolog subfamily C member 3 isoform X1 [KO:K09523]
124503410  interferon-induced, double-stranded RNA-activated protein kinase-like [KO:K16195] [EC:2.7.11.1]
124512103  eukaryotic translation initiation factor 2 subunit 1 [KO:K03237]
124513206  E3 ubiquitin/ISG15 ligase TRIM25-like isoform X1 [KO:K10652] [EC:2.3.2.27]
124501213  antiviral innate immune response receptor RIG-I-like isoform X1 [KO:K12646] [EC:5.6.2.6]
124514967  interferon-induced helicase C domain-containing protein 1-like isoform X1 [KO:K12647] [EC:5.6.2.6]
124505136  NLR family member X1 isoform X1 [KO:K12653]
124503382  mitochondrial antiviral-signaling protein-like [KO:K12648]
124507057  inhibitor of nuclear factor kappa-B kinase subunit alpha isoform X1 [KO:K04467] [EC:2.7.11.10]
124521298  inhibitor of nuclear factor kappa-B kinase subunit beta isoform X1 [KO:K07209] [EC:2.7.11.10]
124525847  NF-kappa-B essential modulator isoform X1 [KO:K07210]
124511146  NF-kappa-B inhibitor beta [KO:K02581]
124508912  NF-kappa-B inhibitor alpha [KO:K04734]
124520800  nuclear factor NF-kappa-B p105 subunit isoform X1 [KO:K02580]
124504954  transcription factor p65 [KO:K04735]
124513268  calcium-binding and coiled-coil domain-containing protein 2-like isoform X1 [KO:K21348]
124520581  toll-like receptor 3 [KO:K05401]
124524270  LOW QUALITY PROTEIN: TIR domain-containing adapter molecule 1-like [KO:K05842]
124512500  TNF receptor-associated factor 3 [KO:K03174]
124501448  serine/threonine-protein kinase TBK1 isoform X1 [KO:K05410] [EC:2.7.11.10]
124509964  inhibitor of nuclear factor kappa-B kinase subunit epsilon isoform X1 [KO:K07211] [EC:2.7.11.10]
124510901  interferon regulatory factor 3-like isoform X1 [KO:K05411]
124517735  CREB-binding protein isoform X1 [KO:K04498] [EC:2.3.1.48]
124501617  histone acetyltransferase p300 [KO:K04498] [EC:2.3.1.48]
124503507  toll-like receptor 4 [KO:K10160]
124509347  toll-like receptor 7 [KO:K05404]
124526006  myeloid differentiation primary response protein MyD88 [KO:K04729]
124501320  interleukin-1 receptor-associated kinase 4 isoform X1 [KO:K04733] [EC:2.7.11.1]
124527563  interferon regulatory factor 7-like isoform X1 [KO:K09447]
124503031  interleukin-1 alpha [KO:K04383]
124503033  interleukin-1 beta [KO:K04519]
124524718  interleukin-6 [KO:K05405]
124526682  interleukin-12 subunit alpha [KO:K05406]
124520689  interleukin-12 subunit beta [KO:K05425]
124528979  tumor necrosis factor [KO:K03156]
124520198  interleukin-8 [KO:K10030]
124513321  C-C motif chemokine 2 [KO:K14624]
124513333  C-C motif chemokine 5 [KO:K12499]
124520517  C-X-C motif chemokine 10-like [KO:K12671]
124524796  intercellular adhesion molecule 1-like [KO:K06490]
124524295  interferon alpha-like [KO:K05414]
124525665  interferon alpha-2-like [KO:K05414]
124525682  interferon alpha-2-like [KO:K05414]
124525697  interferon alpha [KO:K05414]
124525706  interferon alpha-like [KO:K05414]
124525727  interferon alpha-like [KO:K05414]
124525672  interferon beta [KO:K05415]
124527044  interferon alpha/beta receptor 1-like [KO:K05130]
124525951  interferon alpha/beta receptor 2-like isoform X1 [KO:K05131]
124515396  tyrosine-protein kinase JAK1 [KO:K11217] [EC:2.7.10.2]
124524613  non-receptor tyrosine-protein kinase TYK2-like [KO:K11219] [EC:2.7.10.2]
124522538  suppressor of cytokine signaling 3 [KO:K04696]
124515343  signal transducer and activator of transcription 1-alpha/beta [KO:K11220]
124501367  signal transducer and activator of transcription 2-like [KO:K11221]
124508844  interferon regulatory factor 9-like isoform X1 [KO:K04693]
124526453  interferon-induced GTP-binding protein Mx1 [KO:K14754]
124521676  double-stranded RNA-specific adenosine deaminase isoform X1 [KO:K12968] [EC:3.5.4.37]
124508418  protein PML-like isoform X1 [KO:K10054] [EC:2.3.2.-]
124502020  interferon gamma [KO:K04687]
124527922  interferon gamma receptor 1-like [KO:K05132]
124526582  interferon gamma receptor 2-like isoform X1 [KO:K05133]
124527989  tyrosine-protein kinase JAK2 isoform X1 [KO:K04447] [EC:2.7.10.2]
124517703  MHC class II transactivator-like isoform X1 [KO:K08060] [EC:2.7.11.1]
124527968  DLA class II histocompatibility antigen, DR-1 beta chain-like [KO:K06752]
124527969  HLA class II histocompatibility antigen, DR alpha chain [KO:K06752]
124527970  HLA class II histocompatibility antigen, DR alpha chain-like [KO:K06752]
124528564  DLA class II histocompatibility antigen, DR-1 beta chain [KO:K06752]
124528600  DLA class II histocompatibility antigen, DR-1 beta chain-like [KO:K06752]
124528621  HLA class II histocompatibility antigen, DM beta chain-like [KO:K06752]
124528730  HLA class II histocompatibility antigen, DO beta chain-like isoform X1 [KO:K06752]
124528769  HLA class II histocompatibility antigen, DO alpha chain-like [KO:K06752]
124528840  HLA class II histocompatibility antigen, DM alpha chain-like isoform X1 [KO:K06752]
124529193  HLA class II histocompatibility antigen, DP beta 1 chain-like [KO:K06752]
124529194  LOW QUALITY PROTEIN: HLA class II histocompatibility antigen, DP alpha 1 chain-like [KO:K06752]
124514229  NACHT, LRR and PYD domains-containing protein 3 isoform X1 [KO:K12800]
124517853  apoptosis-associated speck-like protein containing a CARD isoform X1 [KO:K12799]
124504879  interleukin-18 [KO:K05482]
124525492  interleukin-33-like isoform X1 [KO:K12967]
124517840  phosphatidylinositol 3-kinase regulatory subunit alpha isoform X1 [KO:K02649]
124514527  phosphatidylinositol 3-kinase regulatory subunit gamma [KO:K02649]
124523730  phosphatidylinositol 3-kinase regulatory subunit beta [KO:K02649]
124525968  phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform [KO:K00922] [EC:2.7.1.153]
124527077  phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform [KO:K00922] [EC:2.7.1.153]
124514827  phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform isoform X1 [KO:K00922] [EC:2.7.1.153]
124510270  RAC-gamma serine/threonine-protein kinase isoform X1 [KO:K04456] [EC:2.7.11.1]
124511119  RAC-beta serine/threonine-protein kinase [KO:K04456] [EC:2.7.11.1]
124512474  RAC-alpha serine/threonine-protein kinase [KO:K04456] [EC:2.7.11.1]
124528816  G1/S-specific cyclin-D3 isoform X1 [KO:K10152]
124501159  cyclin-dependent kinase 4 isoform X1 [KO:K02089] [EC:2.7.11.22]
124523204  cyclin-dependent kinase 6 [KO:K02091] [EC:2.7.11.22]
124526454  tumor necrosis factor ligand superfamily member 10-like [KO:K04721]
124505594  LOW QUALITY PROTEIN: uncharacterized protein LOC124505594 [KO:K04722]
124510216  tumor necrosis factor ligand superfamily member 6 [KO:K04389]
124518681  tumor necrosis factor receptor superfamily member 6-like [KO:K04390]
124501088  LOW QUALITY PROTEIN: tumor necrosis factor receptor superfamily member 1A-like [KO:K03158]
124511385  tumor necrosis factor receptor type 1-associated DEATH domain protein-like [KO:K03171]
124505197  FAS-associated death domain protein-like [KO:K02373]
124515468  caspase-8-like [KO:K04398] [EC:3.4.22.61]
124501306  BH3-interacting domain death agonist-like [KO:K04726]
124510927  apoptosis regulator BAX isoform X1 [KO:K02159]
124528274  bcl-2 homologous antagonist/killer [KO:K14021]
124505439  LOW QUALITY PROTEIN: voltage-dependent anion-selective channel protein 1-like [KO:K05862]
124515603  voltage-dependent anion-selective channel protein 1 [KO:K05862]
124517976  LOW QUALITY PROTEIN: ADP/ATP translocase 2-like [KO:K05863]
124513873  ADP/ATP translocase 2 [KO:K05863]
124520964  ADP/ATP translocase 1 [KO:K05863]
124520991  ADP/ATP translocase 4 [KO:K05863]
124509313  ADP/ATP translocase 3 [KO:K05863]
124524650  cytochrome c [KO:K08738]
124526642  cytochrome c-like [KO:K08738]
124526919  cytochrome c-like [KO:K08738]
124514186  cytochrome c, testis-specific-like [KO:K08738]
124501505  cytochrome c-like [KO:K08738]
124502126  cytochrome c-like [KO:K08738]
124502711  apoptotic protease-activating factor 1 isoform X1 [KO:K02084]
124514692  caspase-9-like [KO:K04399] [EC:3.4.22.62]
124520277  caspase-3 isoform X1 [KO:K02187] [EC:3.4.22.56]
124519245  cleavage and polyadenylation specificity factor subunit 4 isoform X1 [KO:K14404]
124512829  putative cleavage and polyadenylation specificity factor subunit 4-like protein [KO:K14404]
124511890  embryonic polyadenylate-binding protein 2-like [KO:K14396]
124508827  polyadenylate-binding protein 2 isoform X1 [KO:K14396]
124504759  nuclear RNA export factor 1 [KO:K14284]
124509139  nuclear RNA export factor 2-like [KO:K14284]
124509143  nuclear RNA export factor 2-like [KO:K14284]
124509298  LOW QUALITY PROTEIN: nuclear RNA export factor 3-like [KO:K14284]
124509299  LOW QUALITY PROTEIN: nuclear RNA export factor 3-like [KO:K14284]
124504239  NTF2-related export protein 1 [KO:K14285]
124513972  NTF2-related export protein 2 isoform X1 [KO:K14285]
124511100  heterogeneous nuclear ribonucleoprotein U-like protein 1 isoform X1 [KO:K15047]
124503613  mRNA export factor [KO:K14298]
124505252  nuclear pore complex protein Nup98-Nup96 isoform X1 [KO:K14297]
124503761  radical S-adenosyl methionine domain-containing protein 2-like [KO:K15045]
124521853  farnesyl pyrophosphate synthase isoform X1 [KO:K00787] [EC:2.5.1.1 2.5.1.10]
124513500  protein kinase C alpha type isoform X1 [KO:K02677] [EC:2.7.11.13]
124523760  RAF proto-oncogene serine/threonine-protein kinase isoform X1 [KO:K04366] [EC:2.7.11.1]
124508471  dual specificity mitogen-activated protein kinase kinase 1 [KO:K04368] [EC:2.7.12.2]
124524782  dual specificity mitogen-activated protein kinase kinase 2 isoform X1 [KO:K04369] [EC:2.7.12.2]
124517731  mitogen-activated protein kinase 3 isoform X1 [KO:K04371] [EC:2.7.11.24]
124519861  mitogen-activated protein kinase 1 [KO:K04371] [EC:2.7.11.24]
124519153  actin, cytoplasmic 1 [KO:K05692]
124522513  actin, cytoplasmic 2 [KO:K05692]
124508478  ras-related protein Rab-11A [KO:K07904]
124524003  ras-related protein Rab-11B [KO:K07905]
124503404  exportin-1 [KO:K14290]
124525895  importin subunit alpha-5 isoform X1 [KO:K23940]
124519097  importin subunit alpha-8-like [KO:K15043]
124526315  importin subunit alpha-1 [KO:K15043]
124513514  importin subunit alpha-1 [KO:K15043]
124514744  importin subunit alpha-7 [KO:K15042]
124529005  importin subunit alpha-6 [KO:K15042]
Compound
C00027  Hydrogen peroxide
C00080  H+
C05981  Phosphatidylinositol-3,4,5-trisphosphate
Reference
  Authors
Edinger TO, Pohl MO, Stertz S
  Title
Entry of influenza A virus: host factors and antiviral targets.
  Journal
J Gen Virol 95:263-77 (2014)
DOI:10.1099/vir.0.059477-0
Reference
  Authors
Kido H, Okumura Y, Takahashi E, Pan HY, Wang S, Chida J, Le TQ, Yano M
  Title
Host envelope glycoprotein processing proteases are indispensable for entry into human cells by seasonal and highly pathogenic avian influenza viruses.
  Journal
J Mol Genet Med 3:167-75 (2008)
Reference
  Authors
Ramakrishnan B, Viswanathan K, Tharakaraman K, Dancik V, Raman R, Babcock GJ, Shriver Z, Sasisekharan R
  Title
A Structural and Mathematical Modeling Analysis of the Likelihood of Antibody-Dependent Enhancement in Influenza.
  Journal
Trends Microbiol 24:933-943 (2016)
DOI:10.1016/j.tim.2016.09.003
Reference
  Authors
Thanh TT, van Doorn HR, de Jong MD
  Title
Human H5N1 influenza: current insight into pathogenesis.
  Journal
Int J Biochem Cell Biol 40:2671-4 (2008)
DOI:10.1016/j.biocel.2008.05.019
Reference
  Authors
Michael P, Brabant D, Bleiblo F, Ramana CV, Rutherford M, Khurana S, Tai TC, Kumar A, Kumar A
  Title
Influenza A induced cellular signal transduction pathways.
  Journal
J Thorac Dis 5 Suppl 2:S132-41 (2013)
DOI:10.3978/j.issn.2072-1439.2013.07.42
Reference
  Authors
Hale BG, Albrecht RA, Garcia-Sastre A
  Title
Innate immune evasion strategies of influenza viruses.
  Journal
Future Microbiol 5:23-41 (2010)
DOI:10.2217/fmb.09.108
Reference
  Authors
Sharma K, Tripathi S, Ranjan P, Kumar P, Garten R, Deyde V, Katz JM, Cox NJ, Lal RB, Sambhara S, Lal SK
  Title
Influenza A virus nucleoprotein exploits Hsp40 to inhibit PKR activation.
  Journal
PLoS One 6:e20215 (2011)
DOI:10.1371/journal.pone.0020215
Reference
  Authors
Ehrhardt C, Seyer R, Hrincius ER, Eierhoff T, Wolff T, Ludwig S
  Title
Interplay between influenza A virus and the innate immune signaling.
  Journal
Microbes Infect 12:81-7 (2010)
DOI:10.1016/j.micinf.2009.09.007
Reference
  Authors
van de Sandt CE, Kreijtz JH, Rimmelzwaan GF
  Title
Evasion of influenza A viruses from innate and adaptive immune responses.
  Journal
Viruses 4:1438-76 (2012)
DOI:10.3390/v4091438
Reference
  Authors
Long JS, Mistry B, Haslam SM, Barclay WS
  Title
Host and viral determinants of influenza A virus species specificity.
  Journal
Nat Rev Microbiol 17:67-81 (2019)
DOI:10.1038/s41579-018-0115-z
Reference
  Authors
Chen X, Liu S, Goraya MU, Maarouf M, Huang S, Chen JL
  Title
Host Immune Response to Influenza A Virus Infection.
  Journal
Front Immunol 9:320 (2018)
DOI:10.3389/fimmu.2018.00320
Reference
  Authors
Lu X, Masic A, Li Y, Shin Y, Liu Q, Zhou Y
  Title
The PI3K/Akt pathway inhibits influenza A virus-induced Bax-mediated apoptosis by negatively regulating the JNK pathway via ASK1.
  Journal
J Gen Virol 91:1439-49 (2010)
DOI:10.1099/vir.0.018465-0
Reference
  Authors
Ichinohe T, Iwasaki A, Hasegawa H
  Title
Innate sensors of influenza virus: clues to developing better intranasal vaccines.
  Journal
Expert Rev Vaccines 7:1435-45 (2008)
DOI:10.1586/14760584.7.9.1435
Reference
  Authors
Le Sage V, Cinti A, Amorim R, Mouland AJ
  Title
Adapting the Stress Response: Viral Subversion of the mTOR Signaling Pathway.
  Journal
Viruses 8:E152 (2016)
DOI:10.3390/v8060152
Reference
  Authors
Fan Y, Sanyal S, Bruzzone R
  Title
Breaking Bad: How Viruses Subvert the Cell Cycle.
  Journal
Front Cell Infect Microbiol 8:396 (2018)
DOI:10.3389/fcimb.2018.00396
Reference
  Authors
Varga ZT, Palese P
  Title
The influenza A virus protein PB1-F2: killing two birds with one stone?
  Journal
Virulence 2:542-6 (2011)
DOI:10.4161/viru.2.6.17812
Reference
  Authors
Atkin-Smith GK, Duan M, Chen W, Poon IKH
  Title
The induction and consequences of Influenza A virus-induced cell death.
  Journal
Cell Death Dis 9:1002 (2018)
DOI:10.1038/s41419-018-1035-6
Reference
  Authors
Nogales A, Martinez-Sobrido L, Topham DJ, DeDiego ML
  Title
Modulation of Innate Immune Responses by the Influenza A NS1 and PA-X Proteins.
  Journal
Viruses 10:E708 (2018)
DOI:10.3390/v10120708
Reference
  Authors
Dai X, Zhang L, Hong T
  Title
Host cellular signaling induced by influenza virus.
  Journal
Sci China Life Sci 54:68-74 (2011)
DOI:10.1007/s11427-010-4116-z
Reference
  Authors
Li J, Yu M, Zheng W, Liu W
  Title
Nucleocytoplasmic shuttling of influenza A virus proteins.
  Journal
Viruses 7:2668-82 (2015)
DOI:10.3390/v7052668
Reference
  Authors
Dou D, Revol R, Ostbye H, Wang H, Daniels R
  Title
Influenza A Virus Cell Entry, Replication, Virion Assembly and Movement.
  Journal
Front Immunol 9:1581 (2018)
DOI:10.3389/fimmu.2018.01581
Reference
  Authors
Paterson D, Fodor E
  Title
Emerging roles for the influenza A virus nuclear export protein (NEP).
  Journal
PLoS Pathog 8:e1003019 (2012)
DOI:10.1371/journal.ppat.1003019
Related
pathway
lruf00900  Terpenoid backbone biosynthesis
lruf03013  Nucleocytoplasmic transport
lruf03015  mRNA surveillance pathway
lruf04010  MAPK signaling pathway
lruf04110  Cell cycle
lruf04144  Endocytosis
lruf04210  Apoptosis
lruf04620  Toll-like receptor signaling pathway
lruf04621  NOD-like receptor signaling pathway
lruf04622  RIG-I-like receptor signaling pathway
lruf04630  JAK-STAT signaling pathway
lruf05416  Viral myocarditis
KO pathway
ko05164   
LinkDB

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