KEGG   PATHWAY: paro00630
Entry
paro00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Paracoccus tegillarcae
Class
Metabolism; Carbohydrate metabolism
Pathway map
paro00630  Glyoxylate and dicarboxylate metabolism
paro00630

Module
paro_M00373  Ethylmalonyl pathway [PATH:paro00630]
paro_M00621  Glycine cleavage system [PATH:paro00630]
paro_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:paro00630]
Other DBs
GO: 0046487 0043648
Organism
Paracoccus tegillarcae [GN:paro]
Gene
CUV01_12725  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
CUV01_01645  AMP-dependent synthetase [KO:K01895] [EC:6.2.1.1]
CUV01_00835  malate synthase G [KO:K01638] [EC:2.3.3.9]
CUV01_17730  mdh; malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
CUV01_11680  gltA; citrate (Si)-synthase [KO:K01647] [EC:2.3.3.1]
CUV01_11485  acnA; aconitate hydratase AcnA [KO:K01681] [EC:4.2.1.3]
CUV01_07955  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
CUV01_12275  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
CUV01_09400  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
CUV01_18545  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
CUV01_06950  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
CUV01_09395  beta-ketoacyl-ACP reductase [KO:K00023] [EC:1.1.1.36]
CUV01_18540  beta-ketoacyl-ACP reductase [KO:K00023] [EC:1.1.1.36]
CUV01_15090  (R)-hydratase [KO:K17865] [EC:4.2.1.55]
CUV01_03100  ccrA; crotonyl-CoA carboxylase/reductase [KO:K14446] [EC:1.3.1.85]
CUV01_14635  mce; methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
CUV01_03090  protein meaA [KO:K14447] [EC:5.4.99.63]
CUV01_04620  acyl-CoA dehydrogenase [KO:K14448] [EC:1.3.8.12]
CUV01_17705  hypothetical protein [KO:K14449] [EC:4.2.1.148]
CUV01_10870  CoA ester lyase [KO:K08691] [EC:4.1.3.24 4.1.3.25]
CUV01_17720  CoA ester lyase [KO:K14451] [EC:3.1.2.30]
CUV01_01330  acetyl/propionyl-CoA carboxylase subunit alpha [KO:K01965] [EC:6.4.1.3]
CUV01_01310  methylmalonyl-CoA carboxyltransferase [KO:K01966] [EC:6.4.1.3 2.1.3.15]
CUV01_01350  methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
CUV01_01590  FAD-binding oxidoreductase [KO:K00104] [EC:1.1.99.14]
CUV01_01585  2-hydroxy-acid oxidase [KO:K11472] [EC:1.1.99.14]
CUV01_01580  glycolate oxidase iron-sulfur subunit [KO:K11473] [EC:1.1.99.14]
CUV01_01905  D-glycerate dehydrogenase [KO:K00015] [EC:1.1.1.26]
CUV01_14560  glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
CUV01_16465  gph; phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
CUV01_03585  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
CUV01_00890  haloacid dehalogenase [KO:K01091] [EC:3.1.3.18]
CUV01_11715  serine--glyoxylate aminotransferase [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
CUV01_05195  aminotransferase [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
CUV01_11915  glnA; type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
CUV01_12355  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
CUV01_12540  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
CUV01_11600  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
CUV01_13230  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
CUV01_14820  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
CUV01_07750  gcvP; glycine dehydrogenase (aminomethyl-transferring) [KO:K00281] [EC:1.4.4.2]
CUV01_07740  gcvT; glycine cleavage system protein T [KO:K00605] [EC:2.1.2.10]
CUV01_17790  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
CUV01_00570  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
CUV01_18525  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
CUV01_07745  gcvH; glycine cleavage system protein H [KO:K02437]
CUV01_13260  2-hydroxy-3-oxopropionate reductase [KO:K00042] [EC:1.1.1.60]
CUV01_11410  hydroxypyruvate reductase [KO:K11529] [EC:2.7.1.165]
CUV01_17620  keto-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
CUV01_08605  formate dehydrogenase [KO:K00123] [EC:1.17.1.9]
CUV01_02610  formate dehydrogenase subunit alpha [KO:K00123] [EC:1.17.1.9]
CUV01_02605  NADH-quinone oxidoreductase subunit F [KO:K22515] [EC:1.17.1.9]
CUV01_08615  formate dehydrogenase subunit gamma [KO:K00127]
CUV01_10630  alpha/beta hydrolase [KO:K01432] [EC:3.5.1.9]
CUV01_17155  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
CUV01_13240  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
paro00010  Glycolysis / Gluconeogenesis
paro00020  Citrate cycle (TCA cycle)
paro00030  Pentose phosphate pathway
paro00053  Ascorbate and aldarate metabolism
paro00071  Fatty acid degradation
paro00230  Purine metabolism
paro00250  Alanine, aspartate and glutamate metabolism
paro00260  Glycine, serine and threonine metabolism
paro00620  Pyruvate metabolism
paro00710  Carbon fixation by Calvin cycle
paro00750  Vitamin B6 metabolism
paro00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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