SSDB Best Search Result

Entry:cqu:CpipJ_CPIJ006836 (489 a.a.)
Name:histone deacetylase Rpd3
KO:K06067 histone deacetylase 1/2

Search Result : 258 hits (reference genome only)

                 Entry                                       KO      len   SW-score  identity  overlap  
------------------------------------------------------------------ -------------------------------------
aag:5565108 histone deacetylase Rpd3                    K06067     487     3178     0.957      486     
aga:1277106 histone deacetylase HDAC1                   K06067     493     3127     0.935      492     
dme:Dmel_CG7471 histone deacetylase 1                   K06067     521     3011     0.899      486     
dcor:135794025 histone deacetylase HDAC1                K06067     490     2985     0.898      490     
tca:655044 histone deacetylase Rpd3                     K06067     490     2977     0.891      488     
ity:145731870 histone deacetylase 1 isoform X1          K06067     483     2957     0.898      481     
bmor:101744526 histone deacetylase HDAC1                K06067     483     2950     0.894      483     
tny:139776661 histone deacetylase HDAC1                 K06067     497     2938     0.879      489     
ame:411503 histone deacetylase Rpd3                     K06067     492     2918     0.883      486     
dcar:130702821 histone deacetylase 1-like               K06067     540     2775     0.818      484     
cbrm:145400740 histone deacetylase 1                    K06067     483     2684     0.801      482     
isc:8031957 histone deacetylase 1 isoform X2            K06067     520     2676     0.782      496     
bobo:141855804 putative histone deacetylase 1-B         K06067     529     2654     0.805      473     
ola:101166025 histone deacetylase 2                     K06067     489     2654     0.799      473     
amj:106737180 histone deacetylase 1                     K06067     480     2651     0.804      475     
oti:135398932 histone deacetylase 1-like isoform X1     K06067     481     2647     0.789      484     
xtr:594953 histone deacetylase 1                        K06067     480     2647     0.786      481     
plec:309598678 histone deacetylase 1 isoform 1          K06067     480     2645     0.803      476     
gga:373961 histone deacetylase 1                        K06067     480     2645     0.803      476     
xla:379083 probable histone deacetylase 1-B             K06067     480     2644     0.782      481     
ptex:113455314 histone deacetylase 2                    K06067     488     2639     0.788      482     
cpoc:100715675 histone deacetylase 2                    K06067     488     2637     0.786      481     
cge:100764557 histone deacetylase 2 isoform X2          K06067     488     2637     0.798      480     
apla:119713656 histone deacetylase 1                    K06067     480     2636     0.802      474     
hlg:144158792 histone deacetylase 1                     K06067     538     2634     0.827      450     
oas:101107708 histone deacetylase 2                     K06067     488     2634     0.784      481     
rno:84577 histone deacetylase 2                         K06067     488     2634     0.782      481     
lcai:146439893 histone deacetylase 2 isoform X2         K06067     488     2633     0.790      482     
hsa:3066 histone deacetylase 2                          K06067     488     2633     0.786      482     
ecb:100070281 histone deacetylase 1                     K06067     482     2633     0.792      471     
mdo:100022756 histone deacetylase 2                     K06067     488     2633     0.784      481     
bta:407223 histone deacetylase 2                        K06067     488     2633     0.784      481     
cjc:100402327 LOW QUALITY PROTEIN: histone deacetylase  K06067     585     2632     0.786      482     
mcc:694662 histone deacetylase 2                        K06067     488     2632     0.786      482     
ssc:100156170 histone deacetylase 2                     K06067     488     2632     0.784      481     
ont:128952519 histone deacetylase 1-like                K06067     538     2631     0.779      485     
rfq:117027584 histone deacetylase 1                     K06067     482     2631     0.792      471     
tgu:100218599 histone deacetylase 2                     K06067     488     2631     0.790      482     
mmu:15182 histone deacetylase 2                         K06067     488     2628     0.786      482     
camb:145357787 histone deacetylase 1                    K06067     488     2627     0.787      483     
stoz:140411156 histone deacetylase 1 isoform X1         K06067     488     2626     0.786      486     
ocu:100355156 histone deacetylase 1                     K06067     482     2622     0.788      471     
fca:101099228 histone deacetylase 1 isoform X3          K06067     482     2619     0.786      471     
tru:101076176 probable histone deacetylase 1-B          K06067     490     2618     0.778      481     
mglt:137436909 putative histone deacetylase 1-B         K06067     490     2616     0.778      481     
zfa:307239513 putative histone deacetylase 1-B          K06067     486     2611     0.785      480     
pmur:107285501 histone deacetylase 1                    K06067     482     2609     0.781      480     
pmin:119728960 histone deacetylase 1-like               K06067     558     2603     0.772      482     
dre:192302 histone deacetylase 1                        K06067     480     2592     0.784      477     
rbra:145367502 histone deacetylase 2-like               K06067     494     2583     0.772      482     
spu:373339 histone deacetylase 1                        K06067     576     2576     0.754      495     
cmam:144676069 putative histone deacetylase 1-B         K06067     508     2562     0.793      469     
dne:112997477 histone deacetylase 2                     K06067     474     2562     0.783      470     
cfa:475035 histone deacetylase 2 isoform X1             K06067     509     2560     0.788      467     
wsb:137385273 probable histone deacetylase 1-B          K06067     542     2533     0.752      483     
nve:5522239 probable histone deacetylase 1-B isoform X1 K06067     611     2526     0.769      472     
cin:100186761 LOW QUALITY PROTEIN: histone deacetylase  K06067     569     2519     0.751      486     
opg:144646691 histone deacetylase 1-like                K06067     613     2498     0.746      481     
clv:102085406 histone deacetylase 1                     K06067     451     2487     0.804      453     
amua:136910531 histone deacetylase 1-like               K06067     614     2471     0.782      449     
ptr:107966150 histone deacetylase 1 isoform X3          K06067     453     2470     0.792      448     
smm:Smp_005210 histone deacetylase 1                    K06067     469     2131     0.686      440     
cel:CELE_C53A5.3 Histone deacetylase 1                  K06067     461     2120     0.650      460     
odo:145700636 histone deacetylase 1-like                           466     2099     0.779      367     
ddi:DDB_G0268024 histone deacetylase family protein     K06067     495     2076     0.651      427     
ppp:112290844 histone deacetylase 19 isoform X1         K06067     724     2025     0.595      479     
osa:4341387 histone deacetylase 1-like                  K06067     518     1999     0.589      487     
cne:CNF02840 conserved hypothetical protein             K06067     466     1988     0.610      446     
gmx:100795375 histone deacetylase 19                    K06067     497     1984     0.585      484     
ani:ANIA_04493 histone deacetylase RPD3                 K06067     687     1984     0.586      483     
zma:100193206 uncharacterized protein LOC100193206      K06067     539     1975     0.585      489     
nta:107770761 histone deacetylase 19-like               K06067     498     1968     0.594      473     
csv:101214717 histone deacetylase 19                    K06067     492     1966     0.584      473     
ppa:PAS_chr1-4_0125 Histone deacetylase                 K06067     476     1966     0.599      459     
cit:102626043 histone deacetylase 19                    K06067     499     1963     0.615      441     
afm:AFUA_2G03390 histone deacetylase RpdA/Rpd3          K06067     688     1955     0.570      493     
smo:SELMODRAFT_80012 hypothetical protein               K06067     410     1951     0.683      379     
vvi:100244903 histone deacetylase 6                     K06067     464     1950     0.631      426     
mdm:103412136 histone deacetylase 19 isoform X2         K06067     495     1949     0.573      483     
sly:101254943 histone deacetylase 19 isoform X2         K06067     498     1944     0.582      476     
mtr:25490343 histone deacetylase 19                     K06067     498     1944     0.577      471     
fgr:FGSG_00780 histone deacetylase RPD3                 K06067     649     1939     0.563      497     
sot:102606021 histone deacetylase 19                    K06067     498     1936     0.581      473     
yli:2912919 Histone deacetylase RPD3                    K06067     458     1936     0.610      439     
pti:PHATRDRAFT_51026 histone deacetylase 1 isoform      K06067     426     1934     0.637      410     
cal:CAALFM_C307000WA histone deacetylase                K06067     577     1931     0.567      471     
rcu:8278303 histone deacetylase 6                       K06067     468     1927     0.615      455     
ath:AT4G38130 histone deacetylase 1                     K06067     501     1927     0.604      437     
uma:UMAG_02065 histone deacetylase                      K06067     569     1925     0.564      472     
fvr:FVEG_00400 histone deacetylase 1/2                  K06067     650     1923     0.568      488     
mgr:MGG_05857 histone deacetylase RPD3                  K06067     659     1913     0.566      488     
tre:TRIREDRAFT_48386 hypothetical protein               K06067     455     1905     0.620      440     
ncr:NCU00824 histone deacetylase-3                      K06067     658     1896     0.589      462     
kla:KLLA0_E01981g uncharacterized protein               K06067     432     1896     0.614      420     
tps:THAPSDRAFT_41025 histone deacetylase 1p             K06067     450     1893     0.662      376     
maj:MAA_05232 histone deacetylase RpdA/Rpd3             K06067     649     1892     0.548      504     
pif:PITG_01897 histone deacetylase, putative            K06067     461     1880     0.586      459     
sce:YNL330C histone deacetylase RPD3                    K06067     433     1866     0.602      420     
tgo:7895128 histone deacetylase HDAC3                   K06067     451     1843     0.618      400     
spo:2540368 class 1 histone deacetylase Clr6            K06067     405     1827     0.626      396     
tva:5468620 histone deacetylase class I, eukaryotic typ K06067     430     1799     0.609      396     
pfa:PF3D7_0925700 histone deacetylase 1                 K06067     449     1794     0.600      407     
ecu:ECU03_1370 histone deacetylase                      K06067     416     1771     0.581      420     
aor:AO090012000132 unnamed protein product; histone dea K06067     430     1728     0.587      409     
cre:CHLRE_16g673150v5 uncharacterized protein           K06067     443     1700     0.533      420     
ehi:EHI_119320 histone deacetylase                      K06067     448     1540     0.506      423     
gla:GL50803_003281 Histone deacetylase                  K06067     467     1394     0.456      445     
tbr:Tb10.70.6220 histone deacetylase                    K06067     388     1027     0.477      321     
tcr:508637.114 histone deacetylase 1                    K06067     388     1005     0.464      321     
lma:LMJF_21_0680 putative histone deacetylase           K06067     428      997     0.397      395     
gsu:GSU1222 histone deacetylase family protein          K04768     385      756     0.383      324     
gme:Gmet_1739 histone deacetylase family protein        K04768     385      721     0.365      329     
gpo:GPOL_c21320 putative acetoin dehydrogenase          K04768     414      646     0.353      323     
aae:aq_1023 acetoin utilization protein                 K04768     375      639     0.355      327     
mse:Msed_0533 histone deacetylase superfamily           K04768     348      638     0.320      319     
rha:RHA1_ro06811 possible acetoin dehydrogenase         K04768     423      631     0.322      357     
sai:Saci_0213 histone deacetylase                       K04768     346      630     0.313      358     
sto:STK_23050 protein deacetylase                       K04768     350      627     0.333      360     
bsu:BSU29710 acetoin utilization protein AcuC           K04768     387      621     0.334      326     
tfu:Tfu_2707 putative acetoin utilization protein       K04768     392      615     0.326      356     
sgu:SGLAU_19110 acetoin utilization protein             K04768     390      611     0.322      354     
sen:SACE_1779 acetoin dehydrogenase                     K04768     391      607     0.328      314     
rer:RER_28020 putative acetoin utilization protein      K04768     423      606     0.342      313     
tth:TT_C0104 putative T-histone deacetylase             K04768     375      606     0.321      315     
sgr:SGR_4144 putative acetoin dehydrogenase             K04768     382      605     0.343      315     
sso:SSO0028 Acetylpolyamine aminohydrolase              K04768     351      604     0.317      363     
sct:SCAT_3413 Acetoin utilization protein acuC          K04768     390      602     0.320      359     
hth:HTH_0359 acetoin utilization protein                K04768     375      601     0.321      365     
nfa:NFA_37780 putative acetoin dehydrogenase            K04768     421      600     0.339      319     
bpf:BpOF4_03805 acetoin dehydrogenase                   K04768     393      599     0.350      309     
bha:BH3237 acetoin dehydrogenase                        K04768     389      592     0.316      374     
stp:Strop_1461 histone deacetylase superfamily          K04768     393      590     0.336      324     
sshi:J5U23_00222 Deacetylase                            K04768     351      589     0.311      363     
sao:SAOUHSC_01849 acetoin utilization protein AcuC      K04768     389      585     0.343      321     
bce:BC4662 Acetoin utilization acuC protein             K04768     397      585     0.340      309     
amd:AMED_2418 acetoin utilization protein AcuC          K04768     389      584     0.328      326     
sau:SA1556 acetoin utilization protein                  K04768     389      584     0.340      321     
btk:BT9727_4397 acetoin utilization protein             K04768     388      582     0.335      310     
ban:BA_4918 acetoin utilization protein AcuC            K04768     388      582     0.335      310     
gtn:GTNG_2714 Acetoin utilization protein AcuC          K04768     389      581     0.340      312     
ase:ACPL_7141 Histone deacetylase 1                     K04768     395      575     0.347      317     
oih:OB2223 acetoin utilization protein                  K04768     395      574     0.311      328     
chy:CHY_0174 acetoin utilization protein AcuC           K04768     383      570     0.330      309     
sma:SAVERM_4729 putative acetoin dehydrogenase          K04768     367      569     0.330      336     
ccyc:SCMU_32900 acetoin utilization protein AcuC        K04768     416      567     0.334      326     
sco:SCO3330 putative acetoin utilization protein        K04768     367      558     0.345      307     
afr:AFE_2534 histone deacetylase family protein         K04768     388      554     0.335      310     
rsp:RSP_2390 putative Acetoin utilization protein       K04768     375      544     0.331      308     
ksk:KSE_33750 putative deacetylase                      K04768     395      543     0.325      329     
sro:Sros_0535 Histone deacetylase                       K04768     387      543     0.323      325     
sil:SPO2177 acetoin utilization protein AcuC            K04768     368      537     0.346      309     
pjd:Pjdr2_3798 Histone deacetylase                      K04768     391      534     0.326      313     
nca:Noca_0483 histone deacetylase superfamily           K04768     394      533     0.300      360     
kfl:Kfla_6393 Histone deacetylase                       K04768     391      532     0.316      358     
afu:AF_0130 acetylpolyamine aminohydrolase (aphA)                  359      491     0.317      287     
sat:SYN_00740 histone deacetylase family protein                   350      434     0.290      276     
hel:HELO_2878 histone deacetylase superfamily protein              368      421     0.277      343     
pae:PA3774 acetylpolyamine aminohydrolase                          380      414     0.263      323     
pfl:PFL_3361 histone deacetylase family protein                    377      413     0.270      322     
vg:80518113 Tupanvirus soda lake; histone deacetylase 6            356      412     0.295      298     
bpe:BP3063 putative aminohydrolase                                 339      411     0.282      316     
mxa:MXAN_5908 histone deacetylase family protein                   347      409     0.294      296     
kpn:KPN_00530 putative deacetylase                                 371      407     0.286      297     
sur:STAUR_6566 Histone deacetylase family protein                  342      398     0.290      297     
bps:BPSS1250 putative acetylpolyamine aminohydrolase               340      398     0.289      318     
smar:SM39_4947 putative deacetylase                                370      397     0.277      296     
bma:BMAA1098 putative acetylpolyamine aminohydrolase               340      391     0.289      318     
syc:syc0162_c similar to histone deacetylase/AcuC/AphA             304      389     0.286      294     
syf:Synpcc7942_1393 histone deacetylase/AcuC/AphA famil            304      387     0.286      294     
plu:plu2353 unnamed protein product; Highly similar to             370      376     0.276      297     
scl:sce6159 histone deacetylase family protein                     369      374     0.262      336     
npu:Npun_R6092 histone deacetylase superfamily                     305      372     0.281      295     
bxe:Bxe_B1514 Putative histone deacetylase-family prote            334      371     0.278      320     
bms:BR0430 histone deacetylase family protein                      337      370     0.270      293     
bme:BMEI1504 acetylspermidine deacetylase                          337      370     0.270      293     
bmf:BAB1_0456 Histone deacetylase family                           337      369     0.270      293     
ana:alr3350 histone deacetylase/AcuC/AphA family protei            305      365     0.278      295     
pfu:PF0818 aminohydrolase                                          335      362     0.243      296     
cau:Caur_0342 histone deacetylase superfamily                      352      359     0.280      268     
ava:Ava_3192 Histone deacetylase superfamily                       305      356     0.277      296     
alv:Alvin_1729 Histone deacetylase                                 310      355     0.257      300     
cvi:CV_3686 histone deacetylase                                    319      354     0.244      311     
gvi:gll1619 ORF_ID:gll1619                                         303      352     0.304      276     
syp:SYNPCC7002_A1628 histone deacetylase/AcuC/AphA fami            300      346     0.283      286     
vpa:VP2145 histone deacetylase/AcuC/AphA family protein            302      345     0.274      259     
mja:MJ_0535 acetylpolyamine aminohydrolase (aphA)                  343      345     0.299      278     
mlo:mll0103 acetylpolyamine aminohydrolase                         342      343     0.285      309     
sno:Snov_4436 Histone deacetylase                                  309      342     0.271      292     
reh:H16_B2068 Deacetylase, histone deacetylase family              343      340     0.283      269     
swi:Swit_3248 histone deacetylase superfamily                      369      338     0.293      246     
msm:MSMEG_0171 histone deacetylase superfamily protein             309      338     0.285      263     
mth:MTH_1194 acetylpolyamine aminohydolase                         331      336     0.270      300     
bja:blr2234 ORF_ID:blr2234; probable acetylpolyamine am            341      334     0.306      206     
reu:Reut_A2555 Histone deacetylase superfamily                     307      333     0.264      311     
ppu:PP_4764 Histone deacetylase family protein                     304      333     0.292      284     
pho:PH1267 335aa long hypothetical protein                         335      333     0.251      283     
hal:VNG_0136G acetoin utilization protein                          338      332     0.259      293     
mmg:MTBMA_c15720 histone deacetylase-related protein               331      330     0.260      342     
pst:PSPTO_4662 histone deacetylase family protein                  305      329     0.274      288     
lil:LA_0915 histone deacetylase                                    313      326     0.278      255     
hma:rrnAC2299 acetoin utilization protein                          335      325     0.248      311     
psb:Psyr_4295 Histone deacetylase superfamily                      305      323     0.272      298     
hvo:HVO_0522 HdaI-type histone deacetylase                         337      321     0.252      294     
mca:MCA2486 histone deacetylase/AcuC/AphA family protei            310      320     0.293      263     
ret:RHE_CH00917 probable deacetylase protein                       311      319     0.253      293     
tte:TTE1122 Deacetylases, including yeast histone deace            435      319     0.280      271     
avn:Avin_10030 histone deacetylase superfamily                     316      318     0.280      296     
mba:Mbar_A2932 histone deacetylase                                 528      317     0.301      236     
dvu:DVU_2139 histone deacetylase family protein                    439      317     0.262      302     
mma:MM_0067 hypothetical protein                                   514      317     0.246      411     
det:DET0330 histone deacetylase family protein                     341      314     0.262      267     
vvu:VV1_3129 Histone deacetylase/AcuC/AphA family prote            312      314     0.270      289     
vfi:VF_A0367 deacetylase                                           298      312     0.277      289     
rso:RSc0919 putative deacetylase protein                           307      312     0.276      272     
nme:NMB0605 histone deacetylase family protein                     369      312     0.244      307     
mac:MA_2888 histone deacetylase                                    546      312     0.301      236     
rle:RL0977 putative histone deacetylase-like amidohydro            311      311     0.255      294     
rru:Rru_A1176 Histone deacetylase superfamily                      342      310     0.277      271     
cdn:BN940_07226 Deacetylases                                       307      309     0.265      260     
brh:RBRH_01727 Acetylspermidine deacetylase (EC 3.5.1.4            369      309     0.279      301     
ctt:CtCNB1_3440 histone deacetylase superfamily                    317      306     0.259      274     
tko:TK0134 probable acetylpolyamine aminohydrolase, his            334      306     0.241      286     
azc:AZC_0414 histone deacetylase superfamily                       309      305     0.267      292     
pab:PAB0764 Histone deacetylase                                    334      304     0.233      279     
rpa:TX73_004915 histone deacetylase family protein                 309      303     0.254      315     
atu:Atu0748 deacetylase                                            311      303     0.241      294     
zga:ZOBELLIA_2093 Deacetylase, histone deacetylase fami            300      302     0.248      286     
dsy:DSY1590 hypothetical protein                                   441      302     0.276      272     
ccr:CC_3648 histone deacetylase family protein                     304      302     0.280      257     
eba:ebA775 conserved hypothetical protein                          308      301     0.239      310     
vch:VC_2042 histone deacetylase/AcuC/AphA family protei            306      301     0.257      288     
sme:SMc00969 Conserved hypothetical protein                        309      301     0.256      254     
dde:Dde_2337 histone deacetylase superfamily                       439      300     0.287      275     
cps:CPS_3373 histone deacetylase family protein                    300      299     0.293      256     
pai:PAE2981 acetylpolyamine aminohydrolase, putative               336      298     0.283      205     
mar:MAE_40050 histone deacetylase family protein                   305      297     0.244      303     
ape:APE_0092.1 conserved hypothetical protein                      366      296     0.256      328     
anb:ANA_C10913 histone deacetylase-like protein                    306      293     0.243      296     
syn:slr0245 acetylpolyamine aminohydolase                          304      292     0.244      307     
sml:Smlt0822 putative histone deacetylase family protei            312      291     0.253      296     
cja:CJA_1043 histone deacetylase family protein                    342      290     0.233      301     
xau:Xaut_1155 histone deacetylase superfamily                      323      288     0.257      269     
phe:Phep_2043 Histone deacetylase                                  299      285     0.267      300     
mea:Mex_1p0540 Histone deacetylase family protein                  297      285     0.277      289     
ngo:NGO_0187 deacetylase                                           372      284     0.232      306     
son:SO_1815 histone deacetylase superfamily protein                304      283     0.249      285     
abo:ABO_0251 deacetylase family protein                            290      278     0.268      257     
pde:Pden_0397 histone deacetylase superfamily                      319      277     0.258      291     
sjp:SJA_C1-15490 histone deacetylase family protein                321      275     0.289      211     
mta:Moth_0989 Histone deacetylase superfamily                      437      274     0.256      266     
dds:Ddes_0126 histone deacetylase superfamily                      473      272     0.275      207     
dra:DR_0833 histone deacetylase/AcuC/AphA family protei            301      261     0.299      201     
tel:tll0565 histone deacetylase family protein                     250      257     0.275      200     
csa:Csal_1905 histone deacetylase superfamily                      312      246     0.259      266     
xcc:XCC0795 acetoin utilization family protein                     302      234     0.242      252     
xac:XAC0869 acetoin utilization family protein                     303      228     0.276      163     
xom:XOO3534 acetoin utilization family protein                     302      225     0.276      163     
bvu:BVU_3484 conserved hypothetical protein                        603      132     0.246      240     

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