SSDB Best Search Result

Entry:dmo:Dmoj_GI12742 (525 a.a.)
Name:Rpd3
KO:K06067 histone deacetylase 1/2

Search Result : 258 hits (reference genome only)

                 Entry                                       KO      len   SW-score  identity  overlap  
------------------------------------------------------------------ -------------------------------------
dme:Dmel_CG7471 histone deacetylase 1                   K06067     521     3229     0.909      527     
aag:5565108 histone deacetylase Rpd3                    K06067     487     3002     0.897      486     
aga:1277106 histone deacetylase HDAC1                   K06067     493     2956     0.863      502     
dcor:135794025 histone deacetylase HDAC1                K06067     490     2936     0.868      492     
ity:145731870 histone deacetylase 1 isoform X1          K06067     483     2912     0.870      486     
tca:655044 histone deacetylase Rpd3                     K06067     490     2911     0.864      491     
tny:139776661 histone deacetylase HDAC1                 K06067     497     2896     0.849      497     
bmor:101744526 histone deacetylase HDAC1                K06067     483     2896     0.876      475     
ame:411503 histone deacetylase Rpd3                     K06067     492     2889     0.856      494     
dcar:130702821 histone deacetylase 1-like               K06067     540     2715     0.775      511     
ont:128952519 histone deacetylase 1-like                K06067     538     2663     0.740      519     
hlg:144158792 histone deacetylase 1                     K06067     538     2660     0.738      519     
cbrm:145400740 histone deacetylase 1                    K06067     483     2655     0.796      471     
isc:8031957 histone deacetylase 1 isoform X2            K06067     520     2647     0.735      520     
bobo:141855804 putative histone deacetylase 1-B         K06067     529     2630     0.754      512     
oti:135398932 histone deacetylase 1-like isoform X1     K06067     481     2620     0.779      476     
amj:106737180 histone deacetylase 1                     K06067     480     2612     0.773      480     
ola:101166025 histone deacetylase 2                     K06067     489     2606     0.753      486     
ecb:100070281 histone deacetylase 1                     K06067     482     2605     0.771      477     
ocu:100355156 histone deacetylase 1                     K06067     482     2602     0.769      477     
oas:100820752 histone deacetylase 1 isoform X1          K06067     482     2602     0.769      477     
bta:404126 histone deacetylase 1                        K06067     482     2602     0.769      477     
mcc:708441 histone deacetylase 1 isoform X1             K06067     482     2600     0.769      477     
cpoc:100728529 histone deacetylase 1                    K06067     482     2599     0.774      473     
cjc:100399690 histone deacetylase 1 isoform X2          K06067     482     2599     0.769      477     
hsa:3065 histone deacetylase 1                          K06067     482     2599     0.769      477     
mmu:433759 histone deacetylase 1                        K06067     482     2599     0.769      477     
rno:297893 histone deacetylase 1                        K06067     482     2599     0.769      477     
stoz:140411156 histone deacetylase 1 isoform X1         K06067     488     2598     0.765      485     
cge:100752721 histone deacetylase 1                     K06067     482     2598     0.769      477     
ptex:113437613 histone deacetylase 1                    K06067     482     2596     0.770      473     
rfq:117027584 histone deacetylase 1                     K06067     482     2596     0.767      477     
ssc:100622482 histone deacetylase 1                     K06067     482     2596     0.769      477     
camb:145357787 histone deacetylase 1                    K06067     488     2595     0.767      485     
mglt:137436909 putative histone deacetylase 1-B         K06067     490     2595     0.746      488     
pmin:119728960 histone deacetylase 1-like               K06067     558     2595     0.744      500     
tgu:100218599 histone deacetylase 2                     K06067     488     2595     0.762      483     
fca:101099228 histone deacetylase 1 isoform X3          K06067     482     2594     0.765      477     
gga:395635 histone deacetylase 2                        K06067     488     2592     0.760      483     
plec:309587891 histone deacetylase 2                    K06067     488     2591     0.760      483     
lcai:146439893 histone deacetylase 2 isoform X2         K06067     488     2590     0.760      483     
apla:119713656 histone deacetylase 1                    K06067     480     2590     0.767      476     
xtr:447995 histone deacetylase 2                        K06067     488     2588     0.760      483     
xla:399252 histone deacetylase 2 S homeolog             K06067     488     2588     0.760      483     
mdo:100022756 histone deacetylase 2                     K06067     488     2586     0.758      483     
pmur:107285501 histone deacetylase 1                    K06067     482     2575     0.770      470     
tru:101079482 histone deacetylase 2                     K06067     487     2574     0.750      484     
zfa:307239513 putative histone deacetylase 1-B          K06067     486     2558     0.760      475     
spu:373339 histone deacetylase 1                        K06067     576     2553     0.711      519     
rbra:145367502 histone deacetylase 2-like               K06067     494     2552     0.805      447     
dre:192302 histone deacetylase 1                        K06067     480     2539     0.758      476     
cfa:487309 histone deacetylase 1 isoform X1             K06067     521     2533     0.770      466     
cmam:144680809 histone deacetylase 2 isoform X1         K06067     513     2528     0.725      512     
nve:5522239 probable histone deacetylase 1-B isoform X1 K06067     611     2526     0.693      522     
wsb:137385273 probable histone deacetylase 1-B          K06067     542     2521     0.704      506     
dne:112997477 histone deacetylase 2                     K06067     474     2515     0.762      475     
cin:100186761 LOW QUALITY PROTEIN: histone deacetylase  K06067     569     2489     0.704      504     
opg:144646691 histone deacetylase 1-like                K06067     613     2477     0.697      509     
amua:136910531 histone deacetylase 1-like               K06067     614     2456     0.688      516     
ptr:107966150 histone deacetylase 1 isoform X3          K06067     453     2445     0.771      454     
clv:102085406 histone deacetylase 1                     K06067     451     2433     0.768      453     
smm:Smp_005210 histone deacetylase 1                    K06067     469     2140     0.679      449     
cel:CELE_C53A5.3 Histone deacetylase 1                  K06067     461     2104     0.656      450     
ddi:DDB_G0268024 histone deacetylase family protein     K06067     495     2101     0.581      497     
odo:145700636 histone deacetylase 1-like                           466     2078     0.768      367     
ppp:112290844 histone deacetylase 19 isoform X1         K06067     724     1991     0.579      484     
osa:4341387 histone deacetylase 1-like                  K06067     518     1981     0.562      500     
cne:CNF02840 conserved hypothetical protein             K06067     466     1980     0.627      434     
gmx:100795375 histone deacetylase 19                    K06067     497     1974     0.593      464     
ani:ANIA_04493 histone deacetylase RPD3                 K06067     687     1970     0.552      516     
afm:AFUA_2G03390 histone deacetylase RpdA/Rpd3          K06067     688     1966     0.542      531     
cit:102626043 histone deacetylase 19                    K06067     499     1963     0.584      481     
nta:107770761 histone deacetylase 19-like               K06067     498     1961     0.625      427     
zma:541931 histone deacetylase HDA101                   K06067     517     1960     0.571      496     
csv:101214717 histone deacetylase 19                    K06067     492     1950     0.577      475     
yli:2912919 Histone deacetylase RPD3                    K06067     458     1948     0.617      441     
ppa:PAS_chr1-4_0125 Histone deacetylase                 K06067     476     1946     0.615      434     
mtr:25490343 histone deacetylase 19                     K06067     498     1945     0.571      482     
mdm:103412136 histone deacetylase 19 isoform X2         K06067     495     1935     0.575      478     
smo:SELMODRAFT_80012 hypothetical protein               K06067     410     1934     0.678      379     
vvi:100244967 histone deacetylase 19                    K06067     502     1934     0.591      474     
pti:PHATRDRAFT_51026 histone deacetylase 1 isoform      K06067     426     1933     0.639      410     
cal:CAALFM_C307000WA histone deacetylase                K06067     577     1932     0.556      475     
ath:AT4G38130 histone deacetylase 1                     K06067     501     1931     0.564      482     
sot:102606021 histone deacetylase 19                    K06067     498     1919     0.609      427     
sly:101254943 histone deacetylase 19 isoform X2         K06067     498     1918     0.611      427     
uma:UMAG_02065 histone deacetylase                      K06067     569     1912     0.518      519     
fgr:FGSG_00780 histone deacetylase RPD3                 K06067     649     1911     0.542      517     
mgr:MGG_05857 histone deacetylase RPD3                  K06067     659     1909     0.523      545     
rcu:8278303 histone deacetylase 6                       K06067     468     1907     0.630      432     
kla:KLLA0_E01981g uncharacterized protein               K06067     432     1904     0.617      420     
fvr:FVEG_00400 histone deacetylase 1/2                  K06067     650     1899     0.533      518     
ncr:NCU00824 histone deacetylase-3                      K06067     658     1895     0.518      533     
tps:THAPSDRAFT_41025 histone deacetylase 1p             K06067     450     1893     0.611      422     
maj:MAA_05232 histone deacetylase RpdA/Rpd3             K06067     649     1891     0.539      516     
tre:TRIREDRAFT_48386 hypothetical protein               K06067     455     1882     0.609      440     
sce:YNL330C histone deacetylase RPD3                    K06067     433     1866     0.598      420     
pif:PITG_01897 histone deacetylase, putative            K06067     461     1856     0.605      428     
tgo:7895128 histone deacetylase HDAC3                   K06067     451     1840     0.610      400     
pfa:PF3D7_0925700 histone deacetylase 1                 K06067     449     1814     0.607      407     
spo:2540368 class 1 histone deacetylase Clr6            K06067     405     1808     0.616      396     
tva:5468620 histone deacetylase class I, eukaryotic typ K06067     430     1791     0.609      396     
ecu:ECU03_1370 histone deacetylase                      K06067     416     1761     0.576      420     
aor:AO090012000132 unnamed protein product; histone dea K06067     430     1723     0.587      407     
cre:CHLRE_16g673150v5 uncharacterized protein           K06067     443     1703     0.531      420     
ehi:EHI_119320 histone deacetylase                      K06067     448     1545     0.515      421     
gla:GL50803_003281 Histone deacetylase                  K06067     467     1395     0.451      450     
tbr:Tb10.70.6220 histone deacetylase                    K06067     388     1011     0.477      308     
tcr:508637.114 histone deacetylase 1                    K06067     388      988     0.464      308     
lma:LMJF_21_0680 putative histone deacetylase           K06067     428      976     0.395      395     
gsu:GSU1222 histone deacetylase family protein          K04768     385      743     0.380      326     
gme:Gmet_1739 histone deacetylase family protein        K04768     385      709     0.359      329     
mse:Msed_0533 histone deacetylase superfamily           K04768     348      643     0.324      321     
gpo:GPOL_c21320 putative acetoin dehydrogenase          K04768     414      639     0.344      323     
sto:STK_23050 protein deacetylase                       K04768     350      634     0.333      360     
rha:RHA1_ro06811 possible acetoin dehydrogenase         K04768     423      632     0.322      357     
aae:aq_1023 acetoin utilization protein                 K04768     375      632     0.358      310     
sai:Saci_0213 histone deacetylase                       K04768     346      625     0.302      358     
sso:SSO0028 Acetylpolyamine aminohydrolase              K04768     351      616     0.322      363     
sen:SACE_1779 acetoin dehydrogenase                     K04768     391      615     0.330      318     
bsu:BSU29710 acetoin utilization protein AcuC           K04768     387      615     0.328      326     
tfu:Tfu_2707 putative acetoin utilization protein       K04768     392      612     0.323      356     
rer:RER_28020 putative acetoin utilization protein      K04768     423      609     0.342      313     
sshi:J5U23_00222 Deacetylase                            K04768     351      601     0.317      363     
sgr:SGR_4144 putative acetoin dehydrogenase             K04768     382      600     0.334      323     
sgu:SGLAU_19110 acetoin utilization protein             K04768     390      599     0.316      354     
bpf:BpOF4_03805 acetoin dehydrogenase                   K04768     393      599     0.346      309     
sct:SCAT_3413 Acetoin utilization protein acuC          K04768     390      597     0.314      376     
amd:AMED_2418 acetoin utilization protein AcuC          K04768     389      597     0.337      326     
nfa:NFA_37780 putative acetoin dehydrogenase            K04768     421      596     0.336      321     
bha:BH3237 acetoin dehydrogenase                        K04768     389      594     0.318      359     
tth:TT_C0104 putative T-histone deacetylase             K04768     375      590     0.311      315     
hth:HTH_0359 acetoin utilization protein                K04768     375      586     0.340      297     
stp:Strop_1461 histone deacetylase superfamily          K04768     393      582     0.333      324     
bce:BC4662 Acetoin utilization acuC protein             K04768     397      580     0.327      327     
ban:BA_4918 acetoin utilization protein AcuC            K04768     388      577     0.318      327     
btk:BT9727_4397 acetoin utilization protein             K04768     388      575     0.323      328     
chy:CHY_0174 acetoin utilization protein AcuC           K04768     383      572     0.333      309     
sao:SAOUHSC_01849 acetoin utilization protein AcuC      K04768     389      571     0.336      321     
oih:OB2223 acetoin utilization protein                  K04768     395      571     0.311      328     
sau:SA1556 acetoin utilization protein                  K04768     389      570     0.333      321     
gtn:GTNG_2714 Acetoin utilization protein AcuC          K04768     389      569     0.327      312     
ase:ACPL_7141 Histone deacetylase 1                     K04768     395      565     0.344      314     
ccyc:SCMU_32900 acetoin utilization protein AcuC        K04768     416      564     0.331      326     
sma:SAVERM_4729 putative acetoin dehydrogenase          K04768     367      552     0.321      336     
afr:AFE_2534 histone deacetylase family protein         K04768     388      548     0.332      310     
ksk:KSE_33750 putative deacetylase                      K04768     395      546     0.334      329     
sco:SCO3330 putative acetoin utilization protein        K04768     367      543     0.326      334     
sro:Sros_0535 Histone deacetylase                       K04768     387      536     0.322      314     
rsp:RSP_2390 putative Acetoin utilization protein       K04768     375      536     0.331      308     
nca:Noca_0483 histone deacetylase superfamily           K04768     394      532     0.297      360     
pjd:Pjdr2_3798 Histone deacetylase                      K04768     391      527     0.307      332     
sil:SPO2177 acetoin utilization protein AcuC            K04768     368      524     0.337      309     
kfl:Kfla_6393 Histone deacetylase                       K04768     391      522     0.310      358     
afu:AF_0130 acetylpolyamine aminohydrolase (aphA)                  359      494     0.324      287     
sat:SYN_00740 histone deacetylase family protein                   350      431     0.290      276     
pfl:PFL_3361 histone deacetylase family protein                    377      421     0.281      313     
hel:HELO_2878 histone deacetylase superfamily protein              368      418     0.277      343     
pae:PA3774 acetylpolyamine aminohydrolase                          380      415     0.266      323     
mxa:MXAN_5908 histone deacetylase family protein                   347      409     0.297      296     
kpn:KPN_00530 putative deacetylase                                 371      407     0.290      297     
vg:80518113 Tupanvirus soda lake; histone deacetylase 6            356      406     0.292      298     
sur:STAUR_6566 Histone deacetylase family protein                  342      402     0.293      297     
bpe:BP3063 putative aminohydrolase                                 339      402     0.272      313     
smar:SM39_4947 putative deacetylase                                370      401     0.277      296     
bps:BPSS1250 putative acetylpolyamine aminohydrolase               340      388     0.283      315     
syc:syc0162_c similar to histone deacetylase/AcuC/AphA             304      385     0.286      294     
syf:Synpcc7942_1393 histone deacetylase/AcuC/AphA famil            304      383     0.286      294     
bma:BMAA1098 putative acetylpolyamine aminohydrolase               340      381     0.283      315     
npu:Npun_R6092 histone deacetylase superfamily                     305      378     0.295      295     
plu:plu2353 unnamed protein product; Highly similar to             370      377     0.279      297     
bms:BR0430 histone deacetylase family protein                      337      370     0.273      293     
bme:BMEI1504 acetylspermidine deacetylase                          337      370     0.273      293     
bmf:BAB1_0456 Histone deacetylase family                           337      369     0.273      293     
ana:alr3350 histone deacetylase/AcuC/AphA family protei            305      368     0.285      295     
bxe:Bxe_B1514 Putative histone deacetylase-family prote            334      367     0.269      316     
ava:Ava_3192 Histone deacetylase superfamily                       305      359     0.284      296     
cvi:CV_3686 histone deacetylase                                    319      358     0.247      328     
scl:sce6159 histone deacetylase family protein                     369      357     0.270      281     
gvi:gll1619 ORF_ID:gll1619                                         303      355     0.312      276     
pfu:PF0818 aminohydrolase                                          335      355     0.236      296     
cau:Caur_0342 histone deacetylase superfamily                      352      351     0.276      268     
alv:Alvin_1729 Histone deacetylase                                 310      350     0.253      300     
syp:SYNPCC7002_A1628 histone deacetylase/AcuC/AphA fami            300      345     0.287      286     
msm:MSMEG_0171 histone deacetylase superfamily protein             309      345     0.290      259     
bja:blr2234 ORF_ID:blr2234; probable acetylpolyamine am            341      342     0.311      206     
mlo:mll0103 acetylpolyamine aminohydrolase                         342      341     0.285      309     
swi:Swit_3248 histone deacetylase superfamily                      369      340     0.300      247     
mmg:MTBMA_c15720 histone deacetylase-related protein               331      338     0.263      342     
pho:PH1267 335aa long hypothetical protein                         335      336     0.258      283     
mth:MTH_1194 acetylpolyamine aminohydolase                         331      336     0.273      300     
reh:H16_B2068 Deacetylase, histone deacetylase family              343      335     0.283      269     
mja:MJ_0535 acetylpolyamine aminohydrolase (aphA)                  343      334     0.288      278     
ppu:PP_4764 Histone deacetylase family protein                     304      333     0.292      284     
sno:Snov_4436 Histone deacetylase                                  309      332     0.267      292     
vpa:VP2145 histone deacetylase/AcuC/AphA family protein            302      332     0.270      259     
reu:Reut_A2555 Histone deacetylase superfamily                     307      331     0.261      307     
lil:LA_0915 histone deacetylase                                    313      327     0.305      226     
mca:MCA2486 histone deacetylase/AcuC/AphA family protei            310      324     0.293      263     
mma:MM_0067 hypothetical protein                                   514      323     0.238      470     
pst:PSPTO_4662 histone deacetylase family protein                  305      322     0.271      288     
hal:VNG_0136G acetoin utilization protein                          338      321     0.256      293     
rle:RL0977 putative histone deacetylase-like amidohydro            311      318     0.262      294     
tko:TK0134 probable acetylpolyamine aminohydrolase, his            334      317     0.255      286     
vvu:VV1_3129 Histone deacetylase/AcuC/AphA family prote            312      317     0.277      289     
cdn:BN940_07226 Deacetylases                                       307      316     0.262      256     
mba:Mbar_A2932 histone deacetylase                                 528      316     0.292      236     
psb:Psyr_4295 Histone deacetylase superfamily                      305      316     0.268      298     
hvo:HVO_0522 HdaI-type histone deacetylase                         337      315     0.263      297     
rru:Rru_A1176 Histone deacetylase superfamily                      342      315     0.288      271     
tte:TTE1122 Deacetylases, including yeast histone deace            435      315     0.273      271     
vfi:VF_A0367 deacetylase                                           298      314     0.284      289     
rso:RSc0919 putative deacetylase protein                           307      314     0.279      272     
det:DET0330 histone deacetylase family protein                     341      313     0.255      267     
mac:MA_2888 histone deacetylase                                    546      313     0.292      236     
avn:Avin_10030 histone deacetylase superfamily                     316      312     0.274      296     
hma:rrnAC2299 acetoin utilization protein                          335      312     0.241      311     
ret:RHE_CH00917 probable deacetylase protein                       311      310     0.249      293     
brh:RBRH_01727 Acetylspermidine deacetylase (EC 3.5.1.4            369      309     0.276      301     
pab:PAB0764 Histone deacetylase                                    334      309     0.251      283     
nme:NMB0605 histone deacetylase family protein                     369      308     0.260      258     
dvu:DVU_2139 histone deacetylase family protein                    439      307     0.255      302     
atu:Atu0748 deacetylase                                            311      307     0.248      294     
eba:ebA775 conserved hypothetical protein                          308      306     0.242      310     
ctt:CtCNB1_3440 histone deacetylase superfamily                    317      304     0.252      274     
dsy:DSY1590 hypothetical protein                                   441      303     0.281      270     
ape:APE_0092.1 conserved hypothetical protein                      366      302     0.256      328     
azc:AZC_0414 histone deacetylase superfamily                       309      301     0.253      292     
pai:PAE2981 acetylpolyamine aminohydrolase, putative               336      301     0.283      205     
ccr:CC_3648 histone deacetylase family protein                     304      301     0.284      257     
zga:ZOBELLIA_2093 Deacetylase, histone deacetylase fami            300      298     0.248      286     
rpa:TX73_004915 histone deacetylase family protein                 309      298     0.254      303     
sme:SMc00969 Conserved hypothetical protein                        309      297     0.256      254     
cps:CPS_3373 histone deacetylase family protein                    300      295     0.285      256     
anb:ANA_C10913 histone deacetylase-like protein                    306      294     0.243      296     
mar:MAE_40050 histone deacetylase family protein                   305      293     0.239      301     
vch:VC_2042 histone deacetylase/AcuC/AphA family protei            306      290     0.257      288     
cja:CJA_1043 histone deacetylase family protein                    342      289     0.233      301     
sml:Smlt0822 putative histone deacetylase family protei            312      288     0.253      296     
dde:Dde_2337 histone deacetylase superfamily                       439      287     0.276      275     
syn:slr0245 acetylpolyamine aminohydolase                          304      287     0.237      308     
mea:Mex_1p0540 Histone deacetylase family protein                  297      283     0.280      289     
phe:Phep_2043 Histone deacetylase                                  299      281     0.257      307     
xau:Xaut_1155 histone deacetylase superfamily                      323      281     0.248      266     
pde:Pden_0397 histone deacetylase superfamily                      319      281     0.261      291     
ngo:NGO_0187 deacetylase                                           372      280     0.234      295     
son:SO_1815 histone deacetylase superfamily protein                304      280     0.253      285     
abo:ABO_0251 deacetylase family protein                            290      278     0.276      257     
sjp:SJA_C1-15490 histone deacetylase family protein                321      271     0.294      211     
dds:Ddes_0126 histone deacetylase superfamily                      473      270     0.275      207     
mta:Moth_0989 Histone deacetylase superfamily                      437      269     0.249      265     
dra:DR_0833 histone deacetylase/AcuC/AphA family protei            301      256     0.299      201     
tel:tll0565 histone deacetylase family protein                     250      252     0.270      200     
csa:Csal_1905 histone deacetylase superfamily                      312      245     0.259      266     
xcc:XCC0795 acetoin utilization family protein                     302      239     0.250      252     
xac:XAC0869 acetoin utilization family protein                     303      230     0.239      251     
xom:XOO3534 acetoin utilization family protein                     302      224     0.235      251     
bvu:BVU_3484 conserved hypothetical protein                        603      134     0.245      241     

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