SSDB Best Search Result

Entry:par:Psyc_0042 (152 a.a.)
Name:DNA polymerase III, chi subunit
KO:K02339 DNA polymerase III subunit chi

Search Result : 110 hits (reference genome only)

                 Entry                                       KO      len   SW-score  identity  overlap  
------------------------------------------------------------------ -------------------------------------
xcc:XCC0648 DNA polymerase III holoenzyme chi subunit   K02339     141      211     0.307      153     
xom:XOO0758 DNA polymerase III holoenzyme chi subunit   K02339     141      201     0.294      153     
xac:XAC3558 DNA polymerase III holoenzyme chi subunit   K02339     141      200     0.294      153     
reh:H16_A2989 DNA polymerase III chi subunit            K02339     144      178     0.268      142     
brh:RBRH_03149 DNA polymerase III, chi subunit (EC 2.7. K02339     138      170     0.301      143     
reu:Reut_A2682 DNA polymerase III chi subunit, HolC     K02339     144      167     0.252      143     
alv:Alvin_1215 DNA polymerase III chi subunit HolC      K02339     143      165     0.261      153     
ngo:NGO_1226 DNA polymerase III subunit chi             K02339     146      162     0.248      149     
bma:BMA0673 DNA polymerase III, chi subunit, putative   K02339     138      161     0.294      136     
bps:BPSL0966 putative DNA polymerase III chi subunit    K02339     138      160     0.294      136     
avn:Avin_11640 DNA polymerase III chi subunit, HolC     K02339     142      159     0.272      147     
xfa:XF_0136 DNA polymerase III holoenzyme chi subunit   K02339     141      159     0.266      154     
cja:CJA_1447 DNA polymerase III, chi subunit            K02339     139      158     0.255      149     
mca:MCA2098 putative DNA polymerase III, chi subunit    K02339     152      158     0.252      143     
aci:ACIAD0252 DNA polymerase III, chi subunit           K02339     135      158     0.298      151     
pae:PA3832 DNA polymerase III subunit chi               K02339     142      158     0.272      147     
hdu:HD_0667 DNA polymerase III chi subunit              K02339     153      157     0.270      152     
acb:A1S_0226 DNA polymerase III chi subunit             K02339     135      155     0.272      151     
sml:Smlt0674 putative DNA polymerase                    K02339     141      154     0.250      152     
nme:NMB1568 putative DNA polymerase holoenzyme chi subu K02339     146      153     0.269      134     
apl:APL_1505 DNA polymerase III subunit chi             K02339     145      149     0.253      150     
cvi:CV_2913 DNA polymerase III, chi subunit             K02339     141      149     0.238      151     
bpe:BP2422 conserved hypothetical protein               K02339     151      149     0.271      140     
bxe:Bxe_A3637 Putative DNA polymerase III chi subunit   K02339     138      148     0.301      143     
csa:Csal_2921 DNA polymerase III chi subunit, HolC      K02339     150      145     0.248      145     
ppu:PP_0979 DNA polymerase III subunit chi              K02339     142      145     0.252      147     
vfi:VF_0412 DNA polymerase III, chi subunit             K02339     147      143     0.264      148     
nar:Saro_0892 DNA polymerase III chi subunit, HolC      K02339     143      140     0.298      121     
neu:NE0442 putative DNA polymerase III (chi subunit) pr K02339     129      140     0.235      132     
pam:PANA_0496 HolC                                      K02339     152      138     0.248      149     
lpn:lpg2632 DNA polymerase III, chi subunit             K02339     144      136     0.270      152     
pst:PSPTO_1270 DNA polymerase III, chi subunit          K02339     142      135     0.255      145     
hel:HELO_1355 DNA polymerase 3 chi subunit              K02339     151      133     0.248      145     
eam:EAMY_0375 DNA polymerase III, chi subunit           K02339     151      132     0.255      149     
esa:ESA_03446 hypothetical protein                      K02339     153      132     0.250      148     
ddd:Dda3937_01297 DNA polymerase III, chi subunit       K02339     149      131     0.248      149     
enc:ECL_04595 DNA polymerase III subunit chi            K02339     147      130     0.257      148     
zmo:ZMO1308 DNA polymerase III chi subunit HolC         K02339     148      130     0.262      149     
pmu:PM0822 HolC                                         K02339     142      129     0.236      144     
sfl:SF4230 DNA polymerase III subunit chi               K02339     147      128     0.259      147     
ecs:ECs_5236 DNA polymerase III chi subunit HolC        K02339     147      127     0.259      147     
eco:b4259 DNA polymerase III subunit chi                K02339     147      127     0.259      147     
cro:ROD_33251 DNA polymerase III, chi subunit           K02339     147      126     0.248      149     
psb:Psyr_1090 DNA polymerase III, chi subunit           K02339     142      126     0.250      144     
ftu:FTT_0298 DNA polymerase III (CHI subunit) protein   K02339     146      125     0.258      151     
eca:ECA0403 DNA polymerase III, chi subunit             K02339     149      124     0.247      150     
sty:STY4815 DNA polymerase III, chi subunit             K02339     160      124     0.252      147     
stm:STM4476 DNA polymerase III, chi subunit             K02339     160      124     0.252      147     
hin:HI_1397 DNA polymerase III, chi subunit (holC)      K02339     144      123     0.252      151     
pfl:PFL_1065 DNA polymerase III, chi subunit            K02339     142      122     0.240      146     
rso:RSc2414 probable dna polymerase III (chi subunit) p K02339     142      122     0.232      142     
plu:plu4482 DNA polymerase III, chi subunit             K02339     149      121     0.247      150     
pmr:PMI3463 DNA polymerase III, chi subunit             K02339     149      120     0.248      149     
syp:SYNPCC7002_G0112 hypothetical protein                          608      120     0.272      147     
son:SO_3423 DNA polymerase III chi subunit HolC         K02339     154      120     0.240      154     
kpn:KPN_04664 DNA polymerase III subunit chi            K02339     147      119     0.243      148     
hvo:HVO_2106 DeoC family aldolase                       K11645     258      118     0.287      94      
cps:CPS_0739 DNA polymerase III, chi subunit            K02339     157      115     0.209      153     
atu:Atu1111 DNA polymerase III subunit chi              K02339     149      115     0.260      154     
amj:102559652 toll like receptor adaptor molecule 1     K05842     697      112     0.273      143     
rru:Rru_A2200 DNA polymerase III, chi subunit           K02339     160      112     0.248      153     
vpa:VP2645 DNA polymerase III, chi subunit              K02339     149      110     0.235      153     
abo:ABO_0494 DNA polymerase III, chi subunit            K02339     148      109     0.216      148     
smar:SM39_4832 DNA polymerase III, chi subunit          K02339     149      106     0.238      151     
cdn:BN940_05496 DNA polymerase III chi subunit          K02339     153      105     0.261      115     
ret:RHE_CH01457 putative DNA polymerase III, chi subuni K02339     149      102     0.228      149     
ani:ANIA_01609 hypothetical protein                                564      101     0.291      103     
mea:Mex_1p5105 conserved hypothetical protein           K02339     150      100     0.286      84      
lcb:LCABL_27620 Phosphotransferase system sugar-specifi K02773     160      100     0.272      125     
gox:GOX0292 DNA polymerase III, chi subunit             K02339     147      100     0.230      152     
ptex:113450661 cell death activator CIDE-B              K25914     221       98     0.238      105     
yen:YE0499 DNA polymerase III, chi subunit              K02339     149       97     0.237      152     
yps:YPTB0530 DNA polymerase III, chi subunit            K02339     149       97     0.237      152     
ypk:y0745 DNA polymerase III, chi subunit               K02339     158       97     0.237      152     
ype:YPO3442 DNA polymerase III, chi subunit             K02339     149       97     0.237      152     
nta:142168203 uncharacterized protein LOC142168203                 232       95     0.261      142     
sme:SMc00586 Putative DNA polymerase III chi subunit    K02339     149       95     0.247      154     
scl:sce4380 hypothetical protein predicted by Glimmer/C            161       94     0.346      52      
rle:RL1572 putative DNA polymerase III subunit          K02339     149       94     0.228      149     
rsp:RSP_2898 DNA polymerase III, chi subunit            K02339     152       94     0.298      84      
sno:Snov_1098 DNA polymerase III chi subunit HolC       K02339     148       93     0.243      107     
cpoc:100716605 transcription initiation factor IIA subu K03123     109       91     0.310      87      
rfq:117023077 transcription initiation factor IIA subun K03123     109       91     0.310      87      
ocu:100355396 transcription initiation factor IIA subun K03123     109       91     0.310      87      
oas:114110262 transcription initiation factor IIA subun K03123     109       91     0.299      87      
cge:100750331 transcription initiation factor IIA subun K03123     109       91     0.310      87      
hsa:2958 transcription initiation factor IIA subunit 2  K03123     109       91     0.299      87      
fca:101100892 transcription initiation factor IIA subun K03123     109       91     0.310      87      
ecb:100630597 transcription initiation factor IIA subun K03123     109       91     0.310      87      
mdo:100022073 general transcription factor IIA subunit  K03123     109       91     0.310      87      
mcc:702984 transcription initiation factor IIA subunit  K03123     109       91     0.310      87      
ptr:453483 transcription initiation factor IIA subunit  K03123     109       91     0.299      87      
cfa:478327 transcription initiation factor IIA subunit  K03123     109       91     0.310      87      
bta:613479 transcription initiation factor IIA subunit  K03123     109       91     0.299      87      
ssc:100521701 transcription initiation factor IIA subun K03123     109       91     0.310      87      
mmu:235459 transcription initiation factor IIA subunit  K03123     109       91     0.310      87      
vvu:VV1_1475 DNA polymerase III chi subunit             K02339     149       91     0.209      153     
rno:83828 transcription initiation factor IIA subunit 2 K03123     109       91     0.310      87      
dne:112991164 transcription initiation factor IIA subun K03123     109       90     0.299      87      
clv:102097958 transcription initiation factor IIA subun K03123     109       90     0.299      87      
apla:101796906 transcription initiation factor IIA subu K03123     109       90     0.299      87      
tgu:100190631 transcription initiation factor IIA subun K03123     109       90     0.299      87      
gga:770910 transcription initiation factor IIA subunit  K03123     109       90     0.299      87      
vg:54977143 Escherichia phage ESCO5; hypothetical prote            205       89     0.519      27      
cjc:100392682 transcription initiation factor IIA subun K03123     109       87     0.299      87      
ola:101162028 transcription initiation factor IIA subun K03123     109       87     0.299      87      
dre:798997 transcription initiation factor IIA subunit  K03123     109       87     0.299      87      
pmur:107283164 transcription initiation factor IIA subu K03123     109       86     0.276      87      
sao:SAOUHSC_02129 hypothetical protein                             108       84     0.329      70      
sau:SA1726 hypothetical protein                                    108       84     0.329      70      

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