SSDB Best Search Result

Entry:rpf:Rpic12D_2218 (142 a.a.)
Name:DNA polymerase III chi subunit HolC
KO:K02339 DNA polymerase III subunit chi

Search Result : 95 hits (reference genome only)

                 Entry                                       KO      len   SW-score  identity  overlap  
------------------------------------------------------------------ -------------------------------------
rso:RSc2414 probable dna polymerase III (chi subunit) p K02339     142      882     0.901      142     
reu:Reut_A2682 DNA polymerase III chi subunit, HolC     K02339     144      619     0.638      141     
reh:H16_A2989 DNA polymerase III chi subunit            K02339     144      607     0.624      141     
bxe:Bxe_A3637 Putative DNA polymerase III chi subunit   K02339     138      558     0.586      140     
bma:BMA0673 DNA polymerase III, chi subunit, putative   K02339     138      556     0.579      140     
bps:BPSL0966 putative DNA polymerase III chi subunit    K02339     138      555     0.579      140     
brh:RBRH_03149 DNA polymerase III, chi subunit (EC 2.7. K02339     138      530     0.543      140     
cvi:CV_2913 DNA polymerase III, chi subunit             K02339     141      381     0.423      142     
bpe:BP2422 conserved hypothetical protein               K02339     151      355     0.426      148     
eba:ebA7175 DNA polymerase III, chi subunit             K02339     145      342     0.401      142     
pae:PA3832 DNA polymerase III subunit chi               K02339     142      332     0.397      146     
pfl:PFL_1065 DNA polymerase III, chi subunit            K02339     142      323     0.397      146     
pst:PSPTO_1270 DNA polymerase III, chi subunit          K02339     142      321     0.411      146     
psb:Psyr_1090 DNA polymerase III, chi subunit           K02339     142      319     0.411      146     
abo:ABO_0494 DNA polymerase III, chi subunit            K02339     148      314     0.379      145     
mca:MCA2098 putative DNA polymerase III, chi subunit    K02339     152      310     0.430      135     
alv:Alvin_1215 DNA polymerase III chi subunit HolC      K02339     143      300     0.401      147     
neu:NE0442 putative DNA polymerase III (chi subunit) pr K02339     129      296     0.377      122     
avn:Avin_11640 DNA polymerase III chi subunit, HolC     K02339     142      293     0.370      146     
csa:Csal_2921 DNA polymerase III chi subunit, HolC      K02339     150      289     0.333      144     
cdn:BN940_05496 DNA polymerase III chi subunit          K02339     153      288     0.362      138     
hel:HELO_1355 DNA polymerase 3 chi subunit              K02339     151      286     0.317      145     
ppu:PP_0979 DNA polymerase III subunit chi              K02339     142      281     0.342      146     
cja:CJA_1447 DNA polymerase III, chi subunit            K02339     139      280     0.357      140     
lpn:lpg2632 DNA polymerase III, chi subunit             K02339     144      261     0.331      142     
xfa:XF_0136 DNA polymerase III holoenzyme chi subunit   K02339     141      243     0.327      147     
ctt:CtCNB1_2859 DNA polymerase III chi subunit, HolC    K02339      77      229     0.474      76      
ngo:NGO_1226 DNA polymerase III subunit chi             K02339     146      229     0.318      148     
sml:Smlt0674 putative DNA polymerase                    K02339     141      223     0.303      145     
nme:NMB1568 putative DNA polymerase holoenzyme chi subu K02339     146      220     0.307      150     
hin:HI_1397 DNA polymerase III, chi subunit (holC)      K02339     144      199     0.302      126     
son:SO_3423 DNA polymerase III chi subunit HolC         K02339     154      196     0.288      125     
ddd:Dda3937_01297 DNA polymerase III, chi subunit       K02339     149      189     0.299      134     
eca:ECA0403 DNA polymerase III, chi subunit             K02339     149      189     0.316      136     
hdu:HD_0667 DNA polymerase III chi subunit              K02339     153      187     0.287      122     
ccr:CC_1693 DNA polymerase III, chi subunit, putative   K02339     153      186     0.325      120     
xcc:XCC0648 DNA polymerase III holoenzyme chi subunit   K02339     141      185     0.279      147     
apl:APL_1505 DNA polymerase III subunit chi             K02339     145      184     0.264      129     
xom:XOO0758 DNA polymerase III holoenzyme chi subunit   K02339     141      184     0.289      149     
vfi:VF_0412 DNA polymerase III, chi subunit             K02339     147      183     0.248      125     
xac:XAC3558 DNA polymerase III holoenzyme chi subunit   K02339     141      183     0.289      149     
yen:YE0499 DNA polymerase III, chi subunit              K02339     149      181     0.275      131     
yps:YPTB0530 DNA polymerase III, chi subunit            K02339     149      181     0.275      131     
ypk:y0745 DNA polymerase III, chi subunit               K02339     158      181     0.275      131     
ype:YPO3442 DNA polymerase III, chi subunit             K02339     149      181     0.275      131     
pmr:PMI3463 DNA polymerase III, chi subunit             K02339     149      178     0.267      135     
plu:plu4482 DNA polymerase III, chi subunit             K02339     149      175     0.291      117     
rru:Rru_A2200 DNA polymerase III, chi subunit           K02339     160      173     0.283      138     
cps:CPS_0739 DNA polymerase III, chi subunit            K02339     157      170     0.272      125     
smar:SM39_4832 DNA polymerase III, chi subunit          K02339     149      165     0.261      119     
rpa:TX73_015825 DNA polymerase III subunit chi          K02339     150      165     0.299      127     
xau:Xaut_1459 DNA polymerase III chi subunit HolC       K02339     153      161     0.324      108     
pam:PANA_0496 HolC                                      K02339     152      160     0.279      122     
esa:ESA_03446 hypothetical protein                      K02339     153      159     0.241      116     
acb:A1S_0226 DNA polymerase III chi subunit             K02339     135      157     0.267      135     
pmu:PM0822 HolC                                         K02339     142      157     0.256      125     
ret:RHE_CH01457 putative DNA polymerase III, chi subuni K02339     149      155     0.268      138     
sme:SMc00586 Putative DNA polymerase III chi subunit    K02339     149      153     0.278      144     
bja:blr4109 ORF_ID:blr4109; hypothetical protein        K02339     150      152     0.299      127     
eam:EAMY_0375 DNA polymerase III, chi subunit           K02339     151      150     0.269      119     
azc:AZC_0540 DNA polymerase III chi subunit             K02339     149      144     0.292      130     
mlo:mlr7869 unknown protein                             K02339     149      143     0.267      120     
afr:AFE_2203 DNA polymerase III, chi subunit            K02339     141      142     0.279      122     
atu:Atu1111 DNA polymerase III subunit chi              K02339     149      142     0.293      147     
cro:ROD_33251 DNA polymerase III, chi subunit           K02339     147      141     0.248      117     
aci:ACIAD0252 DNA polymerase III, chi subunit           K02339     135      141     0.252      135     
enc:ECL_04595 DNA polymerase III subunit chi            K02339     147      140     0.239      117     
rsp:RSP_2898 DNA polymerase III, chi subunit            K02339     152      140     0.320      128     
rle:RL1572 putative DNA polymerase III subunit          K02339     149      139     0.261      138     
kpn:KPN_04664 DNA polymerase III subunit chi            K02339     147      136     0.239      117     
sil:SPO2452 DNA polymerase III, chi subunit, putative   K02339     154      136     0.343      134     
sfl:SF4230 DNA polymerase III subunit chi               K02339     147      135     0.224      116     
ecs:ECs_5236 DNA polymerase III chi subunit HolC        K02339     147      133     0.224      116     
mea:Mex_1p5105 conserved hypothetical protein           K02339     150      132     0.291      127     
sno:Snov_1098 DNA polymerase III chi subunit HolC       K02339     148      131     0.257      144     
zmo:ZMO1308 DNA polymerase III chi subunit HolC         K02339     148      131     0.307      88      
sty:STY4815 DNA polymerase III, chi subunit             K02339     160      130     0.224      116     
stm:STM4476 DNA polymerase III, chi subunit             K02339     160      130     0.224      116     
eco:b4259 DNA polymerase III subunit chi                K02339     147      130     0.216      116     
vch:VC_2502 DNA polymerase III, chi subunit             K02339     149      128     0.239      134     
rpr:RP872 unknown                                       K02339     165      128     0.276      105     
nar:Saro_0892 DNA polymerase III chi subunit, HolC      K02339     143      126     0.353      85      
vvu:VV1_1475 DNA polymerase III chi subunit             K02339     149      124     0.215      121     
vpa:VP2645 DNA polymerase III, chi subunit              K02339     149      123     0.214      131     
gox:GOX0292 DNA polymerase III, chi subunit             K02339     147      118     0.250      116     
rcp:RCAP_rcc02696 DNA polymerase III, chi subunit       K02339     150      116     0.281      128     
rco:RC1346 unknown                                      K02339     154      113     0.303      76      
bmf:BAB1_0711 DNA polymerase III chi subunit, HolC      K02339     149      110     0.250      120     
bms:BR0690 conserved hypothetical protein               K02339     149      110     0.250      120     
bme:BMEI1260 DNA polymerase iii, chi subunit            K02339     165      110     0.250      120     
vp:1489740-1 Infectious bronchitis virus RNA-directed R K25021     940      107     0.312      93      
vg:77946013 Synechococcus phage S-SCSM1; glycosyltransf            230      107     0.271      140     
ftu:FTT_0298 DNA polymerase III (CHI subunit) protein   K02339     146      107     0.223      121     
smo:SELMODRAFT_451547 hypothetical protein                         257      103     0.295      61      
ncr:NCU03701 hypothetical protein                                  151       95     0.306      85      

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]