SSDB Best Search Result

Entry:slo:Shew_0924 (153 a.a.)
Name:DNA polymerase III chi subunit, HolC
KO:K02339 DNA polymerase III subunit chi

Search Result : 94 hits (reference genome only)

                 Entry                                       KO      len   SW-score  identity  overlap  
------------------------------------------------------------------ -------------------------------------
son:SO_3423 DNA polymerase III chi subunit HolC         K02339     154      668     0.667      150     
ddd:Dda3937_01297 DNA polymerase III, chi subunit       K02339     149      424     0.464      153     
eca:ECA0403 DNA polymerase III, chi subunit             K02339     149      422     0.454      152     
plu:plu4482 DNA polymerase III, chi subunit             K02339     149      415     0.441      152     
vfi:VF_0412 DNA polymerase III, chi subunit             K02339     147      412     0.427      150     
pam:PANA_0496 HolC                                      K02339     152      410     0.451      153     
smar:SM39_4832 DNA polymerase III, chi subunit          K02339     149      398     0.441      152     
yen:YE0499 DNA polymerase III, chi subunit              K02339     149      397     0.421      152     
yps:YPTB0530 DNA polymerase III, chi subunit            K02339     149      397     0.421      152     
ypk:y0745 DNA polymerase III, chi subunit               K02339     158      397     0.421      152     
ype:YPO3442 DNA polymerase III, chi subunit             K02339     149      397     0.421      152     
eam:EAMY_0375 DNA polymerase III, chi subunit           K02339     151      396     0.447      152     
pmr:PMI3463 DNA polymerase III, chi subunit             K02339     149      390     0.447      152     
esa:ESA_03446 hypothetical protein                      K02339     153      388     0.416      149     
cps:CPS_0739 DNA polymerase III, chi subunit            K02339     157      382     0.418      146     
enc:ECL_04595 DNA polymerase III subunit chi            K02339     147      376     0.403      149     
kpn:KPN_04664 DNA polymerase III subunit chi            K02339     147      375     0.409      149     
hdu:HD_0667 DNA polymerase III chi subunit              K02339     153      375     0.432      146     
eco:b4259 DNA polymerase III subunit chi                K02339     147      374     0.396      149     
ecs:ECs_5236 DNA polymerase III chi subunit HolC        K02339     147      373     0.396      149     
vch:VC_2502 DNA polymerase III, chi subunit             K02339     149      366     0.416      149     
cro:ROD_33251 DNA polymerase III, chi subunit           K02339     147      365     0.409      149     
sfl:SF4230 DNA polymerase III subunit chi               K02339     147      365     0.389      149     
sty:STY4815 DNA polymerase III, chi subunit             K02339     160      364     0.389      149     
stm:STM4476 DNA polymerase III, chi subunit             K02339     160      364     0.389      149     
apl:APL_1505 DNA polymerase III subunit chi             K02339     145      363     0.411      151     
lpn:lpg2632 DNA polymerase III, chi subunit             K02339     144      358     0.402      132     
hin:HI_1397 DNA polymerase III, chi subunit (holC)      K02339     144      352     0.457      127     
pmu:PM0822 HolC                                         K02339     142      351     0.415      130     
pae:PA3832 DNA polymerase III subunit chi               K02339     142      350     0.401      147     
vpa:VP2645 DNA polymerase III, chi subunit              K02339     149      343     0.389      149     
vvu:VV1_1475 DNA polymerase III chi subunit             K02339     149      321     0.369      149     
pfl:PFL_1065 DNA polymerase III, chi subunit            K02339     142      314     0.367      147     
avn:Avin_11640 DNA polymerase III chi subunit, HolC     K02339     142      313     0.367      147     
abo:ABO_0494 DNA polymerase III, chi subunit            K02339     148      310     0.338      151     
pst:PSPTO_1270 DNA polymerase III, chi subunit          K02339     142      291     0.356      149     
ppu:PP_0979 DNA polymerase III subunit chi              K02339     142      289     0.369      149     
psb:Psyr_1090 DNA polymerase III, chi subunit           K02339     142      281     0.349      149     
cja:CJA_1447 DNA polymerase III, chi subunit            K02339     139      269     0.309      152     
mca:MCA2098 putative DNA polymerase III, chi subunit    K02339     152      259     0.336      122     
alv:Alvin_1215 DNA polymerase III chi subunit HolC      K02339     143      245     0.356      118     
reh:H16_A2989 DNA polymerase III chi subunit            K02339     144      243     0.452      124     
csa:Csal_2921 DNA polymerase III chi subunit, HolC      K02339     150      232     0.265      147     
eba:ebA7175 DNA polymerase III, chi subunit             K02339     145      232     0.352      125     
bma:BMA0673 DNA polymerase III, chi subunit, putative   K02339     138      229     0.341      123     
bps:BPSL0966 putative DNA polymerase III chi subunit    K02339     138      228     0.341      123     
hel:HELO_1355 DNA polymerase 3 chi subunit              K02339     151      225     0.273      154     
reu:Reut_A2682 DNA polymerase III chi subunit, HolC     K02339     144      225     0.375      120     
rso:RSc2414 probable dna polymerase III (chi subunit) p K02339     142      224     0.314      121     
brh:RBRH_03149 DNA polymerase III, chi subunit (EC 2.7. K02339     138      222     0.367      120     
xom:XOO0758 DNA polymerase III holoenzyme chi subunit   K02339     141      218     0.315      149     
xac:XAC3558 DNA polymerase III holoenzyme chi subunit   K02339     141      217     0.315      149     
xcc:XCC0648 DNA polymerase III holoenzyme chi subunit   K02339     141      215     0.315      149     
bxe:Bxe_A3637 Putative DNA polymerase III chi subunit   K02339     138      213     0.336      125     
afr:AFE_2203 DNA polymerase III, chi subunit            K02339     141      208     0.286      147     
acb:A1S_0226 DNA polymerase III chi subunit             K02339     135      205     0.304      115     
xfa:XF_0136 DNA polymerase III holoenzyme chi subunit   K02339     141      205     0.325      120     
cvi:CV_2913 DNA polymerase III, chi subunit             K02339     141      201     0.333      129     
cdn:BN940_05496 DNA polymerase III chi subunit          K02339     153      200     0.310      116     
sml:Smlt0674 putative DNA polymerase                    K02339     141      200     0.325      151     
bpe:BP2422 conserved hypothetical protein               K02339     151      192     0.289      128     
aci:ACIAD0252 DNA polymerase III, chi subunit           K02339     135      190     0.295      122     
neu:NE0442 putative DNA polymerase III (chi subunit) pr K02339     129      183     0.322      118     
nme:NMB1568 putative DNA polymerase holoenzyme chi subu K02339     146      168     0.287      143     
ngo:NGO_1226 DNA polymerase III subunit chi             K02339     146      165     0.268      127     
rru:Rru_A2200 DNA polymerase III, chi subunit           K02339     160      144     0.252      123     
zmo:ZMO1308 DNA polymerase III chi subunit HolC         K02339     148      140     0.277      112     
azc:AZC_0540 DNA polymerase III chi subunit             K02339     149      134     0.250      124     
xau:Xaut_1459 DNA polymerase III chi subunit HolC       K02339     153      133     0.268      112     
aga:1272263 transmembrane protein 205                   K28436     328      127     0.263      152     
ftu:FTT_0298 DNA polymerase III (CHI subunit) protein   K02339     146      127     0.302      106     
sno:Snov_1098 DNA polymerase III chi subunit HolC       K02339     148      124     0.229      118     
ccr:CC_1693 DNA polymerase III, chi subunit, putative   K02339     153      121     0.264      110     
bja:blr4109 ORF_ID:blr4109; hypothetical protein        K02339     150      120     0.236      123     
rsp:RSP_2898 DNA polymerase III, chi subunit            K02339     152      119     0.242      124     
rpa:TX73_015825 DNA polymerase III subunit chi          K02339     150      119     0.236      123     
sil:SPO2452 DNA polymerase III, chi subunit, putative   K02339     154      112     0.255      102     
ptex:113439925 oxidative stress-induced growth inhibito            544      109     0.545      22      
mea:Mex_1p5105 conserved hypothetical protein           K02339     150      109     0.221      122     
atu:Atu1111 DNA polymerase III subunit chi              K02339     149      109     0.231      121     
gox:GOX0292 DNA polymerase III, chi subunit             K02339     147      106     0.238      105     
mlo:mlr7869 unknown protein                             K02339     149      106     0.217      120     
mtr:25486898 E3 ubiquitin-protein ligase RGLG4          K16280     392      105     0.308      91      
fgr:FGSG_03971 hypothetical protein                                271      104     0.278      72      
dme:Dmel_CG7201 uncharacterized protein, isoform B                 345      104     0.286      140     
sme:SMc00586 Putative DNA polymerase III chi subunit    K02339     149      102     0.238      122     
tbr:Tb09.211.4880 cyclophilin-like protein, putative               384      101     0.304      102     
osa:4349277 uncharacterized LOC4349277                             210      101     0.325      77      
tcr:510761.44 cyclophilin-like protein                             377      100     0.314      86      
rpr:RP872 unknown                                       K02339     165      100     0.266      94      
pif:PITG_08258 cleavage induced hypothetical protein               205       98     0.263      76      
gga:107049541 gem-associated protein 7                  K13135     148       96     0.291      86      
vg:25479061 Scale drop disease virus; ORF_012R                     125       91     0.280      50      
ctt:CtCNB1_2859 DNA polymerase III chi subunit, HolC    K02339      77       85     0.278      54      

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