SSDB Best Search Result

Entry:tbd:Tbd_0579 (143 a.a.)
Name:putative DNA polymerase III chi subunit
KO:K02339 DNA polymerase III subunit chi

Search Result : 109 hits (reference genome only)

                 Entry                                       KO      len   SW-score  identity  overlap  
------------------------------------------------------------------ -------------------------------------
rso:RSc2414 probable dna polymerase III (chi subunit) p K02339     142      380     0.440      141     
reh:H16_A2989 DNA polymerase III chi subunit            K02339     144      375     0.446      139     
bpe:BP2422 conserved hypothetical protein               K02339     151      375     0.440      150     
brh:RBRH_03149 DNA polymerase III, chi subunit (EC 2.7. K02339     138      374     0.437      142     
reu:Reut_A2682 DNA polymerase III chi subunit, HolC     K02339     144      363     0.417      139     
abo:ABO_0494 DNA polymerase III, chi subunit            K02339     148      355     0.415      142     
bma:BMA0673 DNA polymerase III, chi subunit, putative   K02339     138      345     0.437      135     
bps:BPSL0966 putative DNA polymerase III chi subunit    K02339     138      344     0.437      135     
bxe:Bxe_A3637 Putative DNA polymerase III chi subunit   K02339     138      333     0.415      135     
eba:ebA7175 DNA polymerase III, chi subunit             K02339     145      332     0.413      138     
neu:NE0442 putative DNA polymerase III (chi subunit) pr K02339     129      318     0.409      127     
alv:Alvin_1215 DNA polymerase III chi subunit HolC      K02339     143      296     0.378      143     
cdn:BN940_05496 DNA polymerase III chi subunit          K02339     153      291     0.364      140     
ppu:PP_0979 DNA polymerase III subunit chi              K02339     142      290     0.357      143     
mca:MCA2098 putative DNA polymerase III, chi subunit    K02339     152      289     0.396      144     
pae:PA3832 DNA polymerase III subunit chi               K02339     142      269     0.362      141     
avn:Avin_11640 DNA polymerase III chi subunit, HolC     K02339     142      265     0.354      144     
csa:Csal_2921 DNA polymerase III chi subunit, HolC      K02339     150      261     0.324      145     
pfl:PFL_1065 DNA polymerase III, chi subunit            K02339     142      256     0.340      144     
pst:PSPTO_1270 DNA polymerase III, chi subunit          K02339     142      253     0.336      143     
psb:Psyr_1090 DNA polymerase III, chi subunit           K02339     142      251     0.354      144     
cvi:CV_2913 DNA polymerase III, chi subunit             K02339     141      251     0.350      140     
lpn:lpg2632 DNA polymerase III, chi subunit             K02339     144      249     0.309      136     
sme:SMc00586 Putative DNA polymerase III chi subunit    K02339     149      242     0.328      134     
cja:CJA_1447 DNA polymerase III, chi subunit            K02339     139      241     0.319      141     
ret:RHE_CH01457 putative DNA polymerase III, chi subuni K02339     149      228     0.317      145     
son:SO_3423 DNA polymerase III chi subunit HolC         K02339     154      228     0.315      146     
xfa:XF_0136 DNA polymerase III holoenzyme chi subunit   K02339     141      227     0.336      143     
hel:HELO_1355 DNA polymerase 3 chi subunit              K02339     151      222     0.313      147     
rle:RL1572 putative DNA polymerase III subunit          K02339     149      214     0.297      145     
hin:HI_1397 DNA polymerase III, chi subunit (holC)      K02339     144      207     0.299      137     
apl:APL_1505 DNA polymerase III subunit chi             K02339     145      206     0.294      143     
atu:Atu1111 DNA polymerase III subunit chi              K02339     149      206     0.303      145     
sml:Smlt0674 putative DNA polymerase                    K02339     141      205     0.322      146     
xcc:XCC0648 DNA polymerase III holoenzyme chi subunit   K02339     141      202     0.336      143     
cps:CPS_0739 DNA polymerase III, chi subunit            K02339     157      201     0.300      140     
xom:XOO0758 DNA polymerase III holoenzyme chi subunit   K02339     141      199     0.322      143     
xac:XAC3558 DNA polymerase III holoenzyme chi subunit   K02339     141      198     0.322      143     
ccr:CC_1693 DNA polymerase III, chi subunit, putative   K02339     153      194     0.275      142     
ctt:CtCNB1_2859 DNA polymerase III chi subunit, HolC    K02339      77      193     0.411      73      
rsp:RSP_2898 DNA polymerase III, chi subunit            K02339     152      186     0.308      146     
hdu:HD_0667 DNA polymerase III chi subunit              K02339     153      185     0.284      141     
ngo:NGO_1226 DNA polymerase III subunit chi             K02339     146      184     0.260      146     
mlo:mlr7869 unknown protein                             K02339     149      181     0.261      134     
vfi:VF_0412 DNA polymerase III, chi subunit             K02339     147      179     0.267      150     
sfl:SF4230 DNA polymerase III subunit chi               K02339     147      178     0.293      116     
eco:b4259 DNA polymerase III subunit chi                K02339     147      178     0.293      116     
ecs:ECs_5236 DNA polymerase III chi subunit HolC        K02339     147      176     0.293      116     
sil:SPO2452 DNA polymerase III, chi subunit, putative   K02339     154      175     0.304      135     
rpa:TX73_015825 DNA polymerase III subunit chi          K02339     150      175     0.304      135     
sno:Snov_1098 DNA polymerase III chi subunit HolC       K02339     148      174     0.248      145     
afr:AFE_2203 DNA polymerase III, chi subunit            K02339     141      173     0.331      121     
acb:A1S_0226 DNA polymerase III chi subunit             K02339     135      172     0.250      140     
bmf:BAB1_0711 DNA polymerase III chi subunit, HolC      K02339     149      172     0.269      134     
rru:Rru_A2200 DNA polymerase III, chi subunit           K02339     160      172     0.259      147     
bms:BR0690 conserved hypothetical protein               K02339     149      172     0.269      134     
pmu:PM0822 HolC                                         K02339     142      172     0.270      137     
bme:BMEI1260 DNA polymerase iii, chi subunit            K02339     165      172     0.269      134     
nme:NMB1568 putative DNA polymerase holoenzyme chi subu K02339     146      170     0.253      146     
mea:Mex_1p5105 conserved hypothetical protein           K02339     150      165     0.288      146     
sty:STY4815 DNA polymerase III, chi subunit             K02339     160      165     0.284      116     
stm:STM4476 DNA polymerase III, chi subunit             K02339     160      165     0.284      116     
azc:AZC_0540 DNA polymerase III chi subunit             K02339     149      163     0.276      134     
cro:ROD_33251 DNA polymerase III, chi subunit           K02339     147      162     0.276      116     
enc:ECL_04595 DNA polymerase III subunit chi            K02339     147      157     0.284      116     
pmr:PMI3463 DNA polymerase III, chi subunit             K02339     149      157     0.283      120     
xau:Xaut_1459 DNA polymerase III chi subunit HolC       K02339     153      156     0.267      146     
pam:PANA_0496 HolC                                      K02339     152      155     0.321      109     
esa:ESA_03446 hypothetical protein                      K02339     153      153     0.291      117     
kpn:KPN_04664 DNA polymerase III subunit chi            K02339     147      153     0.267      116     
zmo:ZMO1308 DNA polymerase III chi subunit HolC         K02339     148      153     0.266      124     
smar:SM39_4832 DNA polymerase III, chi subunit          K02339     149      150     0.317      123     
aci:ACIAD0252 DNA polymerase III, chi subunit           K02339     135      149     0.229      140     
ftu:FTT_0298 DNA polymerase III (CHI subunit) protein   K02339     146      147     0.283      127     
bja:blr4109 ORF_ID:blr4109; hypothetical protein        K02339     150      147     0.287      136     
eam:EAMY_0375 DNA polymerase III, chi subunit           K02339     151      145     0.277      119     
gox:GOX0292 DNA polymerase III, chi subunit             K02339     147      144     0.218      142     
eca:ECA0403 DNA polymerase III, chi subunit             K02339     149      142     0.277      119     
plu:plu4482 DNA polymerase III, chi subunit             K02339     149      140     0.286      119     
ddd:Dda3937_01297 DNA polymerase III, chi subunit       K02339     149      135     0.262      145     
yen:YE0499 DNA polymerase III, chi subunit              K02339     149      132     0.267      120     
yps:YPTB0530 DNA polymerase III, chi subunit            K02339     149      132     0.267      120     
ypk:y0745 DNA polymerase III, chi subunit               K02339     158      132     0.267      120     
ype:YPO3442 DNA polymerase III, chi subunit             K02339     149      132     0.267      120     
vpa:VP2645 DNA polymerase III, chi subunit              K02339     149      131     0.239      113     
bhe:BH05460 hypothetical protein                        K02339     154      125     0.222      144     
vvu:VV1_1475 DNA polymerase III chi subunit             K02339     149      122     0.219      114     
vch:VC_2502 DNA polymerase III, chi subunit             K02339     149      119     0.242      132     
ral:Rumal_3090 signal recognition particle-docking prot K03110     301      116     0.351      77      
cbo:CBO2451 putative signal recognition particle        K03110     303      113     0.338      77      
pde:Pden_0904 DNA polymerase III chi subunit, HolC      K02339     149      112     0.292      113     
sjp:SJA_C1-25510 DNA polymerase III chi subunit         K02339     149      111     0.267      135     
dre:406647 aminoacyl tRNA synthase complex-interacting  K15438     321      110     0.348      89      
maj:MAA_08866 protein phosphatase 2C                    K01102     589      109     0.283      127     
rcp:RCAP_rcc02696 DNA polymerase III, chi subunit       K02339     150      109     0.248      141     
ola:101167042 aminoacyl tRNA synthase complex-interacti K15438     284      108     0.330      88      
hvo:HVO_0522 HdaI-type histone deacetylase                         337      108     0.283      120     
cfa:490056 brain-specific serine protease 4 isoform X1  K09626     309      108     0.383      60      
tfu:Tfu_2722 HAD-superfamily hydrolase subfamily IB, PS            305      107     0.265      147     
osa:107277766 uncharacterized protein                              315      105     0.273      139     
rpr:RP872 unknown                                       K02339     165      104     0.250      84      
rfq:117034530 ubiquinone biosynthesis protein COQ9, mit K18587     317      102     0.282      103     
rer:RER_12340 putative HxlR family transcriptional regu            153      101     0.314      102     
mtu:Rv2771c hypothetical protein                                   150      100     0.341      88      
vg:19526997 Nitrincola phage 1M3-16; DNA helicase                  220       98     0.279      129     
nta:142178595 uncharacterized protein LOC142178595                 196       96     0.287      108     
xla:121396973 uncharacterized protein LOC121396973                 353       95     0.367      60      
rco:RC1346 unknown                                      K02339     154       91     0.221      104     
bth:BT_1170 hypothetical protein                                    85       84     0.371      35      

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