GFIT result for
thug
|
GFIT result for
thug
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| thug:KNN16_11270 (184 a.a.) |
-- |
sigma-70 family RNA polymerase sigma factor | |||||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > rrs:RoseRS_3810(188) | 178 | 50.0 | 533 | 10 | -- | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > rca:Rcas_0238(197) | 175 | 48.6 | 514 | 14 | -- | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > hau:Haur_2776(182) | 170 | 44.1 | 472 | 17 | <- | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > atm:ANT_25600(185) | 173 | 45.1 | 467 | 7 | -- | RNA polymerase ECF-type sigma factor | |||
| > mhai:OHB01_13355(?) | 174 | 45.4 | 464 | 0 | -- | - | |||
| > pmet:G4Y79_09365(187) | 178 | 44.9 | 463 | 10 | <- | sigma-70 family RNA polymerase sigma factor | |||
| > actq:OG417_49605(?) | 176 | 46.0 | 461 | 0 | -- | - | |||
| > sgrg:L0C25_07670(?) | 178 | 44.4 | 453 | 0 | -- | - | |||
| > sro:Sros_0544(214) | 173 | 44.5 | 450 | 36 | -- | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > dfo:Dform_01306(179) | 174 | 39.7 | 440 | 1 | <- | RNA polymerase sigma-70 factor, ECF subfamily | |||
| > tbh:Tbon_05915(189) | 175 | 43.4 | 439 | 8 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > aer:AERYTH_03095(216) | 172 | 39.5 | 438 | 6 | <- | RNA polymerase sigma70 factor | |||
| > msag:GCM10017556_19080(303) | 181 | 40.9 | 437 | 156 | -- | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > agra:AGRA3207_004707(215) | 171 | 45.0 | 436 | 30 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > dew:DGWBC_0380(205) | 174 | 41.4 | 434 | 1 | <- | putative RNA polymerase sigma factor | |||
| > nro:K8W59_16475(180) | 172 | 41.9 | 434 | 8 | <- | sigma-70 family RNA polymerase sigma factor | |||
| > sth:STH2528(183) | 179 | 40.2 | 434 | 18 | -- | K03088 | rpoE | RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > actw:F7P10_24230(213) | 171 | 45.0 | 432 | 24 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > spiq:OHA34_20490(?) | 171 | 44.4 | 432 | 0 | -- | - | |||
| > stri:C7M71_017505(259) | 179 | 41.9 | 432 | 14 | <- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > kut:JJ691_82570(200) | 183 | 39.9 | 431 | 38 | -- | K03088 | rpoE | rpoE_28; ECF subfamily RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ncx:Nocox_01980(221) | 174 | 42.0 | 431 | 33 | -- | sigW1; ECF RNA polymerase sigma factor SigW | |||
| > plab:C6361_11750(291) | 181 | 40.3 | 431 | 141 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > plat:C6W10_08860(291) | 181 | 40.3 | 431 | 140 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > dly:Dehly_1102(182) | 174 | 40.2 | 430 | 0 | <- | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > now:GBF35_02340(212) | 178 | 41.6 | 430 | 39 | <- | sigma-70 family RNA polymerase sigma factor | |||
| > tfla:O0235_08570(189) | 175 | 42.3 | 430 | 6 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > abry:NYE86_32400(267) | 170 | 42.4 | 429 | 37 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > agla:OIE69_18520(?) | 170 | 43.5 | 429 | 0 | -- | - | |||
| > cap:CLDAP_39000(199) | 175 | 44.6 | 429 | 7 | -- | putative RNA polymerase ECF-type sigma factor | |||
| > tcu:Tcur_4444(220) | 181 | 44.2 | 428 | 17 | -- | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > mcab:HXZ27_28245(322) | 181 | 40.3 | 427 | 237 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > meno:Jiend_34730(315) | 181 | 40.3 | 427 | 96 | -- | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > gly:K3N28_10560(275) | 174 | 40.8 | 426 | 9 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mprn:Q3V37_09750(?) | 181 | 40.9 | 426 | 0 | -- | - | |||
| > mchl:PVK74_18390(323) | 181 | 40.3 | 425 | 120 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mcra:ID554_18470(314) | 181 | 40.3 | 425 | 56 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mhaw:RMN56_14605(?) | 181 | 40.3 | 425 | 0 | -- | - | |||
| > mtem:GCE86_22810(326) | 181 | 40.3 | 425 | 133 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mtua:CSH63_29090(327) | 181 | 40.3 | 425 | 149 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > plk:CIK06_26090(287) | 181 | 40.3 | 425 | 92 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ver:HUT12_28910(314) | 181 | 40.3 | 425 | 69 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > vma:VAB18032_01790(315) | 181 | 40.3 | 425 | 68 | -- | K03088 | rpoE | RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > acta:C1701_12780(190) | 182 | 44.0 | 424 | 16 | -- | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ami:Amir_6736(217) | 179 | 40.8 | 424 | 23 | -- | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > apre:CNX65_33200(217) | 179 | 41.3 | 424 | 26 | -- | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ngn:LCN96_02205(234) | 174 | 41.4 | 424 | 48 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > saq:Sare_0420(310) | 181 | 40.3 | 424 | 55 | -- | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aef:GEV26_15875(232) | 182 | 38.5 | 423 | 6 | <- | sigma-70 family RNA polymerase sigma factor | |||
| > amaz:LUW76_30435(253) | 171 | 43.9 | 423 | 27 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > noa:BKM31_43150(216) | 174 | 41.4 | 423 | 45 | -- | RNA polymerase subunit sigma-70 | |||
| > stp:Strop_0350(311) | 181 | 40.3 | 422 | 58 | -- | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aeb:C6I20_00785(234) | 173 | 38.2 | 421 | 3 | -- | RNA polymerase subunit sigma-70 | |||
| > mau:Micau_5649(323) | 181 | 39.8 | 421 | 126 | -- | K03088 | rpoE | RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mfeu:H1D33_04145(?) | 181 | 39.8 | 421 | 0 | -- | - | |||
| > sct:SCAT_3420(248) | 170 | 41.8 | 421 | 27 | -- | RNA polymerase ECF-subfamily sigma factor | |||
| > scy:SCATT_34060(266) | 170 | 41.8 | 421 | 29 | -- | ECF subfamily RNA polymerase sigma factor | |||
| > shar:HUT13_15615(280) | 170 | 41.2 | 421 | 70 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > micb:MicB006_4659(323) | 181 | 39.8 | 420 | 118 | -- | K03088 | rpoE | putative RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > strf:ASR50_25755(200) | 177 | 43.5 | 420 | 30 | -- | hypothetical protein | |||
| > sxi:SXIM_29850(251) | 170 | 41.2 | 420 | 26 | -- | K03088 | rpoE | RNA polymerase sigma-70 factor, TIGR02952 family; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > cati:CS0771_08550(308) | 186 | 39.2 | 419 | 49 | -- | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > deth:HX448_08000(180) | 174 | 38.5 | 418 | 2 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > kau:B6264_13620(273) | 182 | 40.7 | 418 | 16 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > kit:CFP65_3152(280) | 182 | 40.7 | 418 | 18 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > noo:FE634_03555(256) | 173 | 41.6 | 418 | 17 | <- | sigma-70 family RNA polymerase sigma factor | |||
| > svr:CP971_18840(273) | 182 | 40.7 | 418 | 16 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > dfu:Dfulv_04225(277) | 182 | 41.2 | 417 | 71 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > dros:Drose_03215(305) | 182 | 41.2 | 417 | 77 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sant:QR300_19755(?) | 170 | 41.8 | 417 | 0 | -- | - | |||
| > sbat:G4Z16_13190(290) | 172 | 41.3 | 417 | 24 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sclf:BB341_16660(283) | 170 | 41.8 | 417 | 26 | <- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sgj:IAG43_17895(281) | 170 | 41.8 | 417 | 44 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sna:Snas_5692(266) | 179 | 40.8 | 417 | 20 | -- | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > speu:CGZ69_20195(282) | 170 | 41.8 | 417 | 24 | <- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > spri:SPRI_3359(280) | 170 | 41.8 | 417 | 30 | <- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > src:M271_22495(268) | 170 | 41.8 | 417 | 20 | <- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > svl:Strvi_0700(268) | 170 | 41.8 | 417 | 29 | <- | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ksk:KSE_33690(273) | 182 | 40.7 | 416 | 176 | -- | bldN; putative RNA polymerase ECF subfamily sigma factor | |||
| > snk:CP967_19315(262) | 170 | 41.2 | 416 | 21 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sauo:BV401_25345(268) | 170 | 41.8 | 415 | 20 | <- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sbh:SBI_06006(270) | 170 | 41.8 | 415 | 43 | <- | K03088 | rpoE | AdsA-like sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sfa:Sfla_3545(261) | 170 | 41.2 | 415 | 18 | <- | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > smal:SMALA_4300(178) | 170 | 41.8 | 415 | 18 | <- | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > ssx:SACTE_2784(258) | 170 | 41.2 | 415 | 17 | <- | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > strp:F750_3180(178) | 170 | 41.2 | 415 | 19 | <- | putative RNA polymerase sigma factor | |||
| > daur:Daura_03330(311) | 182 | 41.2 | 414 | 79 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > salj:SMD11_3706(268) | 170 | 41.8 | 414 | 25 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sauh:SU9_015525(261) | 170 | 41.8 | 414 | 17 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sdw:K7C20_17360(261) | 170 | 41.8 | 414 | 12 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > shau:K9S39_24435(?) | 170 | 41.8 | 414 | 0 | -- | - | |||
| > sine:KI385_21325(261) | 170 | 41.8 | 414 | 23 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > slc:SL103_01485(261) | 170 | 41.8 | 414 | 18 | <- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > smob:J7W19_14715(270) | 170 | 41.8 | 414 | 29 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sov:QZH56_19460(?) | 170 | 41.8 | 414 | 0 | -- | - | |||
| > spla:CP981_18155(261) | 170 | 41.8 | 414 | 21 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > srim:CP984_21350(260) | 170 | 41.8 | 414 | 23 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > srk:FGW37_14890(277) | 170 | 41.8 | 414 | 25 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > strc:AA958_20175(268) | 184 | 40.2 | 414 | 29 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > stro:STRMOE7_18375(261) | 170 | 41.8 | 414 | 19 | <- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |