GFIT result for
apre
|
GFIT result for
apre
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| apre:CNX65_33200 (217 a.a.) |
-- |
K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > ami:Amir_6736(217) | 217 | 98.2 | 1409 | 23 | <> | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sesp:BN6_80910(214) | 217 | 80.6 | 1133 | 32 | <> | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ssyi:EKG83_44655(214) | 217 | 81.1 | 1120 | 41 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ume:RM788_23035(?) | 217 | 76.0 | 1058 | 0 | -- | - | |||
| > led:BBK82_16820(205) | 219 | 71.7 | 981 | 34 | -- | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > kal:KALB_8357(199) | 194 | 78.4 | 974 | 28 | <> | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > cros:N8J89_39205(206) | 194 | 76.3 | 959 | 31 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > kut:JJ691_82570(200) | 194 | 74.2 | 924 | 38 | <> | K03088 | rpoE | rpoE_28; ECF subfamily RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > actu:Actkin_06078(213) | 219 | 66.2 | 902 | 31 | <> | K03088 | rpoE | sigM_2; RNA polymerase sigma factor SigM; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > kphy:AOZ06_50515(208) | 194 | 71.1 | 894 | 43 | <- | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > alo:CRK60207(203) | 188 | 72.9 | 890 | 33 | <- | K03088 | rpoE | putative RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aoi:AORI_0478(232) | 204 | 70.6 | 886 | 37 | <> | K03088 | rpoE | rpoE; RNA polymerase sigma-70 factor, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aroo:NQK81_20425(232) | 204 | 70.6 | 886 | 39 | <> | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aori:SD37_38850(243) | 216 | 66.7 | 879 | 33 | <> | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > amyb:BKN51_36565(236) | 204 | 69.6 | 878 | 37 | <> | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aprt:MUY14_34215(230) | 201 | 70.1 | 875 | 50 | <> | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ppel:H6H00_11285(238) | 217 | 64.1 | 875 | 23 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aja:AJAP_37250(235) | 207 | 68.6 | 874 | 36 | <> | K03088 | rpoE | RNA polymerase sigma-W factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > amyc:CU254_01120(232) | 191 | 72.8 | 866 | 28 | <> | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > arhd:VSH64_39990(?) | 188 | 72.9 | 862 | 0 | -- | - | |||
| > rant:RHODO2019_01705(?) | 177 | 74.0 | 861 | 0 | -- | - | |||
| > amd:AMED_0475(230) | 190 | 72.6 | 859 | 51 | <> | K03088 | rpoE | rpoE; RNA polymerase sigma-70 factor, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > amm:AMES_0474(230) | 190 | 72.6 | 859 | 51 | <> | K03088 | rpoE | rpoE; RNA polymerase sigma-70 factor, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > amn:RAM_02440(230) | 190 | 72.6 | 859 | 51 | <- | K03088 | rpoE | RNA polymerase sigma-70 factor, ECF subfamily protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > amz:B737_0475(230) | 190 | 72.6 | 859 | 51 | <> | K03088 | rpoE | rpoE; RNA polymerase sigma-70 factor, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sacc:EYD13_01630(213) | 200 | 69.0 | 854 | 10 | <- | K03088 | rpoE | sigM1; RNA polymerase sigma factor SigM; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > paut:Pdca_60610(329) | 217 | 62.7 | 852 | 134 | <> | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pbro:HOP40_11225(221) | 191 | 69.1 | 851 | 23 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > svi:Svir_02810(223) | 193 | 69.9 | 850 | 10 | <> | K03088 | rpoE | RNA polymerase sigma factor, sigma-70 family; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > athm:L1857_04835(215) | 205 | 68.8 | 849 | 22 | <> | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aacd:LWP59_02100(196) | 194 | 69.1 | 847 | 26 | <> | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pmad:BAY61_01965(213) | 202 | 66.8 | 843 | 15 | <> | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > amyy:YIM_45355(226) | 188 | 69.7 | 839 | 38 | <> | K03088 | rpoE | sigX; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aab:A4R43_32865(226) | 188 | 69.7 | 837 | 26 | <> | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > amq:AMETH_0444(215) | 193 | 69.9 | 833 | 27 | <> | K03088 | rpoE | rpoE; RNA polymerase sigma-70 factor, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sen:SACE_6951(293) | 196 | 65.8 | 832 | 80 | <- | K03088 | rpoE | putative RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > phh:AFB00_14335(240) | 183 | 69.9 | 827 | 16 | <> | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pecq:AD017_16505(212) | 183 | 69.9 | 825 | 13 | <> | K03088 | rpoE | RNA polymerase sigma70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pseq:AD006_08675(212) | 183 | 69.9 | 825 | 13 | <> | K03088 | rpoE | RNA polymerase sigma70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > psea:WY02_13180(212) | 183 | 68.9 | 821 | 10 | <> | K03088 | rpoE | RNA polymerase sigma70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pseh:XF36_00455(212) | 183 | 68.9 | 819 | 8 | <> | K03088 | rpoE | RNA polymerase sigma70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sace:GIY23_20985(206) | 184 | 66.8 | 810 | 6 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > blap:MVA48_18610(247) | 186 | 66.7 | 806 | 35 | -> | sigma-70 family RNA polymerase sigma factor | |||
| > bsd:BLASA_4480(259) | 216 | 60.6 | 793 | 44 | <> | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > jtl:M6D93_02445(289) | 200 | 61.5 | 790 | 11 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mmar:MODMU_4999(210) | 184 | 65.8 | 780 | 24 | <> | K03088 | rpoE | sigX; RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pdx:Psed_5625(202) | 193 | 61.1 | 766 | 21 | <> | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > acta:C1701_12780(190) | 184 | 66.3 | 757 | 16 | -- | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aey:CDG81_20900(247) | 220 | 57.3 | 756 | 24 | -- | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > actr:Asp14428_53360(307) | 189 | 63.0 | 748 | 76 | <> | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > plab:C6361_11750(291) | 202 | 59.4 | 742 | 141 | <> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > plat:C6W10_08860(291) | 202 | 59.4 | 742 | 140 | <> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > actn:L083_7652(305) | 189 | 62.4 | 741 | 66 | <> | K03088 | rpoE | adsA; RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ccaz:COUCH_03770(309) | 189 | 62.4 | 739 | 74 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > stub:MMF93_18845(279) | 212 | 57.1 | 739 | 23 | -> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > psuu:Psuf_027560(307) | 199 | 59.8 | 736 | 125 | <> | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > spra:CP972_20380(276) | 211 | 57.8 | 736 | 48 | -> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > shar:HUT13_15615(280) | 206 | 57.3 | 732 | 70 | -> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > yia:LO772_19945(261) | 216 | 56.9 | 732 | 25 | -> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > plk:CIK06_26090(287) | 196 | 60.2 | 730 | 92 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > afs:AFR_40205(313) | 189 | 61.4 | 729 | 86 | <> | K03088 | rpoE | putative RNA polymerase ECF-subfamily sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > agla:OIE69_18520(?) | 197 | 59.4 | 729 | 0 | -- | - | |||
| > stp:Strop_0350(311) | 199 | 58.8 | 729 | 58 | -> | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aih:Aiant_37260(314) | 194 | 59.3 | 728 | 51 | <- | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aou:ACTOB_008204(?) | 194 | 59.3 | 728 | 0 | -- | - | |||
| > mcab:HXZ27_28245(322) | 198 | 59.6 | 728 | 237 | -> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mfeu:H1D33_04145(?) | 195 | 60.5 | 728 | 0 | -- | - | |||
| > acts:ACWT_7737(314) | 194 | 59.3 | 727 | 46 | <> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ase:ACPL_7868(314) | 194 | 59.3 | 727 | 47 | <> | K03088 | rpoE | adsA; RNA polymerase sigma-H factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > cati:CS0771_08550(308) | 201 | 59.2 | 727 | 49 | <> | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mhaw:RMN56_14605(?) | 195 | 60.5 | 727 | 0 | -- | - | |||
| > mtem:GCE86_22810(326) | 195 | 60.5 | 727 | 133 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > smob:J7W19_14715(270) | 203 | 57.1 | 727 | 29 | -> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > abry:NYE86_32400(267) | 190 | 60.5 | 726 | 37 | -> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ams:AMIS_75870(314) | 185 | 61.6 | 726 | 57 | <> | K03088 | rpoE | putative RNA polymerase ECF-subfamily sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > saq:Sare_0420(310) | 199 | 58.3 | 726 | 55 | -> | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sgf:HEP81_03470(264) | 205 | 57.1 | 726 | 22 | -> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > srj:SRO_3261(264) | 205 | 57.1 | 726 | 22 | -> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > kit:CFP65_3152(280) | 216 | 55.6 | 725 | 18 | -> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > asic:Q0Z83_094000(?) | 184 | 62.0 | 724 | 0 | -- | - | |||
| > mau:Micau_5649(323) | 195 | 60.0 | 724 | 126 | <> | K03088 | rpoE | RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > micb:MicB006_4659(323) | 195 | 60.0 | 724 | 118 | <> | K03088 | rpoE | putative RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sant:QR300_19755(?) | 205 | 57.1 | 724 | 0 | -- | - | |||
| > sauh:SU9_015525(261) | 199 | 58.3 | 724 | 17 | -> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sdw:K7C20_17360(261) | 199 | 58.3 | 724 | 12 | -> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sine:KI385_21325(261) | 199 | 58.3 | 724 | 23 | -> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > spla:CP981_18155(261) | 199 | 58.3 | 724 | 21 | -> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > strh:GXP74_36695(244) | 211 | 55.5 | 724 | 20 | -> | sigma-70 family RNA polymerase sigma factor | |||
| > stud:STRTU_003842(261) | 199 | 58.3 | 724 | 0 | -> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mchl:PVK74_18390(323) | 195 | 60.0 | 723 | 120 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mtua:CSH63_29090(327) | 195 | 60.0 | 723 | 149 | <> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sct:SCAT_3420(248) | 193 | 58.5 | 722 | 27 | -> | RNA polymerase ECF-subfamily sigma factor | |||
| > scy:SCATT_34060(266) | 193 | 58.5 | 722 | 29 | -> | ECF subfamily RNA polymerase sigma factor | |||
| > scyg:S1361_22385(259) | 206 | 56.8 | 722 | 31 | -> | K03088 | rpoE | sigX; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > src:M271_22495(268) | 190 | 60.0 | 722 | 20 | -> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > srim:CP984_21350(260) | 212 | 55.7 | 722 | 23 | -> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > salj:SMD11_3706(268) | 204 | 57.4 | 721 | 25 | -> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > seng:OJ254_10515(?) | 199 | 57.8 | 721 | 0 | -- | - | |||
| > snig:HEK616_72540(261) | 199 | 57.8 | 721 | 20 | -> | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > spun:BFF78_18770(261) | 214 | 56.5 | 721 | 31 | -> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |