Barnesiella viscericola: BARVI_12990
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Entry
BARVI_12990 CDS
T02986
Name
(GenBank) transporter
KO
K12340
outer membrane protein
Organism
bvs
Barnesiella viscericola
Pathway
bvs01501
beta-Lactam resistance
bvs01503
Cationic antimicrobial peptide (CAMP) resistance
bvs02020
Two-component system
bvs03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
bvs00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
BARVI_12990
09132 Signal transduction
02020 Two-component system
BARVI_12990
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
BARVI_12990
01503 Cationic antimicrobial peptide (CAMP) resistance
BARVI_12990
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bvs02000
]
BARVI_12990
02044 Secretion system [BR:
bvs02044
]
BARVI_12990
01504 Antimicrobial resistance genes [BR:
bvs01504
]
BARVI_12990
Transporters [BR:
bvs02000
]
Other transporters
Pores ion channels [TC:
1
]
BARVI_12990
Secretion system [BR:
bvs02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
BARVI_12990
RTX toxin transporter
BARVI_12990
Multiple protein transporter
BARVI_12990
RaxAB-RaxC type I secretion system protein
BARVI_12990
Antimicrobial resistance genes [BR:
bvs01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
BARVI_12990
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
BARVI_12990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
OMS28_porin
Motif
Other DBs
NCBI-ProteinID:
AHF13491
UniProt:
W0EWN5
LinkDB
All DBs
Position
3047736..3049214
Genome browser
AA seq
492 aa
AA seq
DB search
MNRSKLVSRVVALCALSLPGILWAQTQQADRQTLTLDLKTAIGIALNENPTVKVADMEIE
KKDYSKKETIAGLFPRIDGSASYSRTIEKQTMYMDSEAFDMSAMFAPIYNTIGQLHPEFQ
VPQLGGGSSSSGETGMKVGTDNTYSVGFSASLPIIAPQLWKSVQMSSADIEQAVEAARSS
RLSLVNQVEKAYYSLLLAQNSYEVIKMSYDNAKLNAQDYKHKFEQGTASEYDVLRAEVQV
RNLEPTMLQTENSVKLSKLQLKVLMGIDMTVEIALTDRLEDYEASMYEETLNIDTSLEQN
TDLRQLDLQTAYLKKAVDVQRMAWFPTLSATANYNWISMSYGGVFDDFRWSPYSTVGLSL
SLPIFQGGARHFRIKQAKSNVLQLGLQRDNLKNTLSMQVQMSMDNIQKSVKQIASNKEGV
RQAEKAYAIMQKSFEIGSATFIELNDADLALTNSRLSYNQAIYDFLAAKSDLQLLLGNAD
LEQYRQSVENTK
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgaatagaagcaaactcgtatcccgagtcgtcgccttgtgtgccctgtcgttgccgggg
attctgtgggctcaaacccagcaagcggaccggcagacgttgacactcgatttgaagaca
gccatcggtatcgccctcaacgaaaatcccacggtcaaggttgccgatatggaaattgaa
aagaaagattactccaagaaggagaccatcgccggcctgttcccccgcatcgacgggtcg
gcctcatatagccgtaccatcgagaaacagacgatgtacatggactccgaggccttcgac
atgagtgccatgtttgctcccatatacaacacgataggacagttgcaccccgagtttcag
gtaccgcagctgggaggaggctcctcttcgtcgggcgaaaccggtatgaaggtgggaacc
gacaacacctattcggtagggttcagtgcttctttgcccatcatcgcaccccagttgtgg
aagagcgtgcagatgtcgagtgccgacatcgagcaggccgtcgaggctgcccgttcttcg
cgcctcagtctggtcaaccaggtagaaaaggcctattacagtctgttgctggcccagaat
tcctatgaggtaatcaagatgagctacgacaatgccaagctcaatgcccaggactacaag
cacaagtttgagcagggaaccgcttcggagtatgatgttttgcgggccgaggtgcaggtg
cgcaacttggaacccaccatgttgcaaaccgagaacagcgtgaagctgagcaaactgcaa
ctgaaagtgttgatgggtatcgacatgacggtagagattgccctcactgaccgcctcgaa
gactacgaagcctcgatgtatgaggagacgctcaatattgatacctcgctcgaacagaat
accgacctgcgtcagttggacttgcagacggcctacctgaaaaaggctgtcgacgtgcaa
cgcatggcctggttccctaccttgtcggctacggccaactacaactggatttcgatgagc
tatggcggtgtgttcgatgacttccgttggagcccctattctacggtggggctatcgctt
tcgcttcccatcttccagggcggggcacgtcatttccgcatcaagcaggccaagtcgaat
gtgttgcagttgggcttgcaacgcgataatctcaaaaataccctctcgatgcaggtgcag
atgtcgatggacaatatacagaagtcggtcaagcagatagcctccaacaaagagggggtg
cgtcaggccgagaaggcatacgccattatgcagaagagtttcgagatagggtcggccact
ttcatcgaactcaacgatgccgacctggctctcaccaattcgcgcctctcctacaaccag
gccatctacgatttcctggcggccaaatccgatttgcaactgctgctgggcaatgccgat
ctggaacagtatcggcagtccgtcgagaataccaagtaa
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