Callithrix jacchus (white-tufted-ear marmoset): 100386367
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Entry
100386367 CDS
T03264
Symbol
ADAR
Name
(RefSeq) double-stranded RNA-specific adenosine deaminase isoform X3
KO
K12968
double-stranded RNA-specific adenosine deaminase [EC:
3.5.4.37
]
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04622
RIG-I-like receptor signaling pathway
cjc04623
Cytosolic DNA-sensing pathway
cjc05162
Measles
cjc05164
Influenza A
cjc05171
Coronavirus disease - COVID-19
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
100386367 (ADAR)
04623 Cytosolic DNA-sensing pathway
100386367 (ADAR)
09160 Human Diseases
09172 Infectious disease: viral
05171 Coronavirus disease - COVID-19
100386367 (ADAR)
05164 Influenza A
100386367 (ADAR)
05162 Measles
100386367 (ADAR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cjc03041
]
100386367 (ADAR)
Enzymes [BR:
cjc01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.37 double-stranded RNA adenine deaminase
100386367 (ADAR)
Spliceosome [BR:
cjc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
100386367 (ADAR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
A_deamin
z-alpha
dsrm
DND1_DSRM
TrmB
DnaD_N
Motif
Other DBs
NCBI-GeneID:
100386367
NCBI-ProteinID:
XP_017821801
Ensembl:
ENSCJAG00000009410
LinkDB
All DBs
Position
18:complement(8557596..8608007)
Genome browser
AA seq
1275 aa
AA seq
DB search
MNPQQGHSLSGYYPYPFQGYEHRKVRHQQPGPGSSPSSFRHKQIEFLKGQLPEAPVIGKQ
TPSLSPSLPGLWPRFPALPVYSTGFRKEEIWGVPRSVHFGRQGLQRAFQHPSPRGRILPQ
RGVDCLSSDFQELNINQDQEQRILKLLKELGEGKATTVHDLSGKLRAPKKEINRVLYSLA
KKGKLQKEAGIPPLWKISASAQARNQHSRAVRPDGHSKGAPNSDPSLEPEDRNSTSVSED
FTEPFITVSAQARNQLSRAVRPDGHSQGAPNSDPSLEPEDRNSTSVSEDFTEPFITVSAQ
ARNQHSRAVRPDGHSQGAPNSEPSLEPEDGNSTSALEDPLELFDMAEIKEKICDYLFNVS
DSSALNLAKNIGLSKARDINAVLIDLERQGDVSRQGTTPPMWHLTDKKRERMQIKRNVNS
VLETAPSAIPEIQRHAEFPTCNLPTSNASNNMVTTEKVENGQEPVVKLENRQETRPEPVR
LKPPVHNNGPSRAGYVDFENGQWATDDIPDDLNSIRAAPGEFRAIMEMPSFYSHGLPRCS
PYKKLTECQLKNPISGLLEYAQFASQTCEFNLIEQSGPPHEPRFKFQVVINGREFPPAEA
GSKKVAKQDAAMKAMTILLEEAKAKDSGKSEESSHYSTEKESEKTAESQPSAPSATPFFS
GKSPVTTLLECMHKLGNSCEFRLLSKEGPAHEPKFEYCVQVGAQTFPSVSAPSKKVAKQM
AAEEAMKALHGEATNSMLSDDQPEGTISESLDNLESMMPNKVRRIGELVRYLNTNPVGGL
LEYARSHGFAAEFKLVDQSGPPHEPKFVYQAKVGGRWFPAVCAHSKKQGKQEAADAALRV
LIGENEKAERMGFAEVTPVTGATLRRTMLLLSRSPEAQPKTLPVTGSTFHDQIAMLSHRC
FNTLTNSLQPSLLGRKILAAIVMKKDSEDMGVVVSLGTGNRCVKGDSLSLKGETVNDCHA
EIISRRGFIRFLYSELMKYNPQTAKDSIFEPAKGGGKLQIKKTVSFHLYISTAPCGDGAL
FDKSCSDRAMENTDSRHYPVFENPKQGKLRTKVENGEGTIPVESSDIVPTWDGIRLGERL
RTMSCSDKILRWNVLGLQGALLTHFLQPIYLKSVTLGYLFSQGHLTRAICCRMARDGSAF
EDGLRHPFIVNHPKVGRVSVYDSKRQSGKTKETSVNWCLADGYDLEILDGTRGTVDGPRN
ELSRVSKKNIFLLFKKLCSFRYRRDLLRLSYGEAKKAARDYETAKNYFKKSLKDMGYGNW
ISKPQEEKNFYLCPV
NT seq
3828 nt
NT seq
+upstream
nt +downstream
nt
atgaacccgcagcaggggcattccctcagtggatactacccctatccatttcaaggctat
gagcacagaaaggtcagacaccagcagcctgggccgggatcttcccccagtagtttccga
cataagcaaatagagtttctcaagggccagctcccagaagcaccagtgattggaaagcag
acaccgtcactgtcaccttccctcccaggactctggccaaggtttccagcactacctgtc
tacagtaccggattcaggaaagaggagatctggggtgtccccaggagcgtgcattttgga
aggcaggggctccaaagagcattccagcatccttcaccacgtggtaggattctgccacag
agaggtgtcgattgcctttcctcagatttccaggaactgaatatcaaccaggatcaggaa
caaaggatcttaaagctcttgaaagagcttggagaagggaaggccaccacagtacatgat
ctgtctgggaaacttagggccccaaagaaggaaatcaatcgagttttatactccctggca
aagaagggcaagctacagaaggaggcaggaataccccctttgtggaaaatctcggcctca
gctcaggctcggaaccagcacagcagagcagtgagaccagacggtcatagcaagggagcc
ccaaactcagacccgagtttggaacctgaagacagaaactccacgtctgtctcagaagat
tttactgagccttttatcacagtctcagctcaggctcggaaccagctcagcagagcggtg
agaccagacggtcatagccagggagccccaaactcagacccgagtttagaacctgaagac
agaaactccacgtctgtctcagaagattttactgagccttttatcacagtctcagctcag
gctcggaaccagcacagcagagcagtgagaccagacggtcatagccagggagccccaaac
tcagaaccgagtttggaacctgaagacggaaactccacatctgccttagaagatcctctt
gagctttttgacatggctgagatcaaggagaaaatctgtgactatctcttcaatgtgtct
gactcctctgccctgaatttggctaaaaatattggcctctccaaggcccgagatataaat
gctgtgctgattgacttggaaaggcagggggatgtcagtagacaagggacaacccctccc
atgtggcatttgacagacaagaagcgagagaggatgcaaattaagagaaacgtgaacagt
gttcttgaaacagctccgtctgcaatccctgagattcaaaggcacgcagagttccccacc
tgtaatttacccacgtcaaatgcctcaaataacatggtaaccacagaaaaagtggagaat
gggcaggaacctgtcgtaaagttagaaaacaggcaagagaccagaccagagccagtaaga
ctgaaaccacctgttcataacaatggcccctcaagagcagggtatgttgactttgaaaat
ggccagtgggccacagatgacatcccagatgacttgaatagtatccgcgcagcaccaggt
gagtttcgagccatcatggagatgccgtccttctacagtcacggcctgccacggtgttca
ccctacaagaaactgacagagtgccagctgaagaaccccatcagtgggctgttagaatat
gctcagttcgctagtcaaacctgtgagttcaacctgatagagcagagtggaccaccccat
gaacctcgatttaaattccaggttgttatcaatggccgagagtttcccccagctgaagct
ggaagcaagaaagtggccaagcaggatgcagctatgaaagccatgacaattctgctagag
gaagccaaagccaaggacagtggaaaatcagaagaatcatcccactattctacagagaaa
gagtcagagaagaccgcagagtcccagccctccgccccttcagccacacccttcttttct
gggaagagccccgtcaccacgctgcttgagtgtatgcacaagctggggaactcctgtgaa
ttccggctcctttccaaagaaggccctgcccatgagcccaagtttgaatactgtgttcaa
gtgggagcccagactttccccagtgtgagtgcccccagcaagaaagtggcaaagcagatg
gccgcagaggaagccatgaaggccctgcatggggaggcgaccaactccatgctttctgat
gaccagcccgaaggtacaatctcagagtcacttgataacttggaatcgatgatgcccaac
aaggtcaggaggattggtgagctcgtgagatacttgaacaccaaccctgtgggtggcctt
ttggagtacgctcgctcccatggcttcgctgccgaattcaagttggtcgaccagtccgga
cctcctcacgagcccaagtttgtttaccaagcaaaagttgggggtcgctggttcccggct
gtctgcgcacacagcaagaagcaaggcaagcaggaagcagcagatgcggctctccgtgtc
ttgattggggagaacgagaaggcagaacgcatgggtttcgcagaggtaaccccagtgaca
ggggccactctcagaagaactatgctcctcctctcaaggtccccagaagcacagccaaag
acactccctgtcaccggcagcaccttccatgaccagatagccatgctgagccaccgatgc
ttcaacactctaaccaacagcctccagccctccttgctcggccgcaagattctggcagcc
atcgttatgaagaaagactctgaggacatgggtgtggttgtcagcttgggaacagggaat
cgctgtgtgaaaggagattctctcagcctaaagggagaaactgtcaacgactgtcatgca
gaaatcatctcccggagaggcttcatcaggtttctctacagtgagttaatgaaatacaac
ccccaaactgcaaaggatagcatatttgagcctgctaagggaggaggaaagctccaaatc
aaaaagactgtgtcattccatctctatatcagcaccgctccgtgtggagatggtgccctc
tttgacaagtcctgcagcgaccgtgccatggaaaacaccgactcccgccactaccctgtc
tttgagaaccccaaacaaggcaagctccgcaccaaggtggagaacggagaaggcacaatc
cctgtggaatccagtgacattgtgcctacgtgggacggcattcggcttggagagaggctc
cgtaccatgtcctgtagtgacaaaatcctacgctggaatgtgctaggcctgcaaggggca
ttgttgacccacttcctgcagcccatttatctcaaatctgtcacattgggttaccttttc
agccaagggcatctgacccgtgctatttgctgtcgtatggcaagagacgggagtgcattt
gaggatggactgcgacatccctttattgtcaaccaccccaaggttggcagagtcagcgta
tatgattccaaaaggcagtcagggaagactaaggagacaagcgtcaactggtgtctggct
gatggctacgacctggagatcctggacggcaccagaggcaccgtggacgggccacggaat
gaattgtcccgggtctccaaaaagaacatttttcttctgtttaagaagctctgctccttc
cgttaccgcagggatctactgagactctcctatggtgaggccaagaaagctgcccgtgac
tacgagacggccaagaactacttcaaaaaaagcctgaaggatatgggctatgggaactgg
attagcaaaccccaggaggagaagaacttttatctctgcccagtatag
DBGET
integrated database retrieval system
