Dyadobacter fermentans: Dfer_1159
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Entry
Dfer_1159 CDS
T00970
Name
(GenBank) outer membrane efflux protein
KO
K12340
outer membrane protein
Organism
dfe
Dyadobacter fermentans
Pathway
dfe01501
beta-Lactam resistance
dfe01503
Cationic antimicrobial peptide (CAMP) resistance
dfe02020
Two-component system
dfe03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
dfe00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
Dfer_1159
09132 Signal transduction
02020 Two-component system
Dfer_1159
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Dfer_1159
01503 Cationic antimicrobial peptide (CAMP) resistance
Dfer_1159
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dfe02000
]
Dfer_1159
02044 Secretion system [BR:
dfe02044
]
Dfer_1159
01504 Antimicrobial resistance genes [BR:
dfe01504
]
Dfer_1159
Transporters [BR:
dfe02000
]
Other transporters
Pores ion channels [TC:
1
]
Dfer_1159
Secretion system [BR:
dfe02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
Dfer_1159
RTX toxin transporter
Dfer_1159
Multiple protein transporter
Dfer_1159
RaxAB-RaxC type I secretion system protein
Dfer_1159
Antimicrobial resistance genes [BR:
dfe01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
Dfer_1159
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
Dfer_1159
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
ACT92408
UniProt:
C6W548
LinkDB
All DBs
Position
1379052..1380449
Genome browser
AA seq
465 aa
AA seq
DB search
MPMTSKKYFPSLLLALSLGGAGEKLCAQTLTLEQAVETAVSNYGSIKAKNNYLNASRATV
IQSRKEYLPNFNLSAQQDYGTVNGQNGPLYGMGLSVASSGLPLPDQNWNSAFGALYLTNV
NWDFFAFGRARERIHVAQSAVNRDRADLDQEQFQHSVRVAGAYLNLLAAQRLIRSWENNL
ERANALKTVVVTRAKNGLIPGVDSSLANAEVSNAKISITQARDFEQEQANILARLMGVTE
QRFQLDTLLLSRTPRMAAEPAGKPENHPLLRFYSNRIAVSEQQAKYFHTLAMPTFSLFGV
FQGRGAGFSSSYAADQTAYTHNYFEGIKPVRYNYLLGIGATWNMTSMLRVRQQVMSQKFI
SNALKEEYDLADQQLKNQLILSETKISNAIANYREAPVQVRSASDAYLQKSVLYKNGLSN
IVDMTQALYVLNRAETSRDIAATNIWQAILLKAAASGDIGIFLNQ
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgcccatgacgtcaaagaagtattttccctccctgctgctggccctttcgctgggcggt
gccggtgagaagctgtgtgcccaaacacttacattagagcaggccgtagagaccgccgtg
agcaattacggcagcattaaggccaaaaataattacctcaatgcttcgagagcgacggta
atccagagccggaaggaatacctgcccaatttcaacctctccgcgcagcaggactacggc
acggtcaacggccagaacggcccgctttacggcatggggctatcggtagcttcgtcgggg
ctgccgctgccggaccaaaactggaactccgcattcggcgcactgtacctgacgaacgtc
aactgggacttcttcgcattcggccgtgcacgtgaacgcattcacgtagcgcagtcggcc
gtgaaccgcgaccgtgccgacctcgaccaggaacagttccagcacagcgtgcgcgtggcc
ggggcgtatctcaacctgcttgccgcccagcggctcatccggtcgtgggaaaacaacctg
gaacgcgccaatgcattgaaaaccgtagtggtaacccgcgcaaaaaacgggttgatcccc
ggcgtggactcttcgctggccaatgcggaagtgtcgaatgccaagatcagcatcacacag
gcgcgcgatttcgagcaggaacaggccaacatcctggcccggctgatgggcgtcaccgag
cagcgttttcagctcgatacattgctgctctcccgaacaccgcgcatggccgccgagccg
gccggtaagcccgagaaccacccgttgctgcggttttattccaaccgcattgccgtaagc
gagcagcaggccaaatacttccacacccttgcgatgcctacattctcgctgtttggcgtg
tttcagggtcgcggagcaggtttttcatccagctacgccgccgaccagacggcctacaca
cacaattatttcgagggtatcaaaccggtgaggtacaattatctgctggggatcggcgct
acctggaacatgacgagcatgctgcgggtccggcagcaggtcatgtcacagaaattcatt
tccaatgcattgaaagaggaatacgacctggccgatcagcaattgaaaaaccagctgatc
ctctccgaaacgaagatcagcaatgctattgccaattaccgtgaggcgccggtacaggta
cgatcggcttccgacgcctatttgcagaaaagtgttttgtataaaaacggcctcagcaat
atcgtggacatgacgcaggccctctatgtgctcaaccgcgccgaaacaagccgcgacatc
gccgccacaaacatctggcaggcgatattactcaaagcagcggcaagcggcgacatcggc
atttttctgaatcagtaa
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