Escherichia coli O145 H28 RM13514 (EHEC): ECRM13514_3936
Help
Entry
ECRM13514_3936 CDS
T03010
Symbol
tolC
Name
(GenBank) Type I secretion outer membrane protein, TolC precursor
KO
K12340
outer membrane protein
Organism
ecoo
Escherichia coli O145:H28 RM13514 (EHEC)
Pathway
ecoo01501
beta-Lactam resistance
ecoo01503
Cationic antimicrobial peptide (CAMP) resistance
ecoo02020
Two-component system
ecoo03070
Bacterial secretion system
Module
ecoo_M00696
Multidrug resistance, efflux pump AcrEF-TolC
ecoo_M00697
Multidrug resistance, efflux pump MdtEF-TolC
Brite
KEGG Orthology (KO) [BR:
ecoo00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
ECRM13514_3936 (tolC)
09132 Signal transduction
02020 Two-component system
ECRM13514_3936 (tolC)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
ECRM13514_3936 (tolC)
01503 Cationic antimicrobial peptide (CAMP) resistance
ECRM13514_3936 (tolC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecoo02000
]
ECRM13514_3936 (tolC)
02044 Secretion system [BR:
ecoo02044
]
ECRM13514_3936 (tolC)
01504 Antimicrobial resistance genes [BR:
ecoo01504
]
ECRM13514_3936 (tolC)
Transporters [BR:
ecoo02000
]
Other transporters
Pores ion channels [TC:
1
]
ECRM13514_3936 (tolC)
Secretion system [BR:
ecoo02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
ECRM13514_3936 (tolC)
RTX toxin transporter
ECRM13514_3936 (tolC)
Multiple protein transporter
ECRM13514_3936 (tolC)
RaxAB-RaxC type I secretion system protein
ECRM13514_3936 (tolC)
Antimicrobial resistance genes [BR:
ecoo01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
ECRM13514_3936 (tolC)
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
ECRM13514_3936 (tolC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
vRNAP_dom
Se-cys_synth_N
Motif
Other DBs
NCBI-ProteinID:
AHG10591
LinkDB
All DBs
Position
3830142..3831623
Genome browser
AA seq
493 aa
AA seq
DB search
MKKLLPILIGLSLSGFSSLSQAENLMQVYQQARLSNPELRKSAADRDAAFEKINEARSPL
LPQLGLGADYTYSNGYRDANGINSNATSASLQLTQSIFDMSKWRALTLQEKAAGIQDVTY
QTDQQTLILNTATAYFNVLNAIDVLSYTQAQKEAIYRQLDQTTQRFNVGLVAITDVQNAR
AQYDTVLANEVTARNNLDNAVEQLRQITGNYYPELAALNVENFKTDKPQPVNALLKEAEK
RNLSLLQARLSQDLAREQIRQAQDGHLPTLDLTASTGISDTSYSGSKTRGAAGTQYDDSN
MGQNKVGLSFSLPIYQGGMVNSQVKQAQYNFVGASEQLESAHRSVVQTVRSSFNNINASI
SSINAYKQAVVSAQSSLDAMEAGYSVGTRTIVDVLDATTTLYNAKQELANARYNYLINQL
NIKSALGTLNEQDLLALNNALSKPVSTNPENVAPQTPEQNAIADGYAPDSPAPVVQQTFA
RTTTSNGHNPFRN
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaattgctccccattcttatcggcctgagcctttctgggttcagttcgttgagc
caggccgagaacctgatgcaagtttatcagcaagcacgccttagtaacccggaattgcgt
aagtctgccgccgatcgtgatgctgcctttgaaaaaattaatgaagcgcgcagtccatta
ctgccacagctaggtttaggtgcagattacacctatagcaacggctaccgcgacgcgaac
ggcatcaactctaacgcgaccagtgcgtccctgcagttaactcaatccatttttgatatg
tcgaaatggcgtgcgttaacgctgcaggaaaaagcagcagggattcaggacgtcacatat
cagaccgatcagcaaaccttgatcctcaacaccgcgaccgcttatttcaacgtgttgaat
gctattgacgttctttcctatacacaggcgcaaaaagaagcgatctaccgtcaattagat
caaaccacccaacgttttaacgtgggcctggtagcgatcaccgacgtgcagaacgcccgc
gcgcagtacgataccgtgctggcgaacgaagtgaccgcacgtaataaccttgataacgcg
gtagagcagctgcgccagatcaccggtaactactatccggaactggcggcgctgaatgtc
gaaaactttaaaaccgacaaaccacagccggttaacgcgctgctgaaagaagccgaaaaa
cgcaacctgtcgctgttacaggcacgcttgagccaggacctggcgcgcgagcaaattcgc
caggcgcaggatggtcacttaccgactctggatttaacggcttctaccgggatttctgac
acctcttatagcggttcgaaaacccgtggtgccgctggtacccagtatgacgatagcaat
atgggccagaacaaagttggcctgagcttctcgctgccgatttatcagggcggaatggtt
aactcgcaggtgaaacaggcccagtacaactttgttggtgccagcgagcaactggaaagc
gcgcatcgtagcgtcgtgcaaaccgtacgttcctccttcaacaacattaatgcttctatc
agtagcattaacgcctacaaacaagccgtagtttccgctcaaagctcattagacgcgatg
gaagcgggctactcggtcggtacgcgtaccattgttgatgtgttggatgcgaccaccacg
ctgtacaacgccaagcaagagttggcgaatgcgcgttataactatctgattaatcagctg
aatattaagtcagccctgggtacgttgaacgagcaggatctgctggcactgaacaatgcg
ctgagcaaaccggtttccactaatccggaaaacgttgccccgcaaacgccggaacagaat
gctattgctgatggttatgcgcctgatagcccggcacccgtcgttcagcaaacattcgca
cgcactaccaccagtaacggtcataaccctttccgtaactga
DBGET
integrated database retrieval system
