Mus caroli (Ryukyu mouse): 110290048
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Entry
110290048 CDS
T05910
Gene name
Mmp9
Definition
(RefSeq) matrix metalloproteinase-9 isoform X1
KO
K01403
matrix metalloproteinase-9 (gelatinase B) [EC:
3.4.24.35
]
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal01522
Endocrine resistance
mcal04657
IL-17 signaling pathway
mcal04668
TNF signaling pathway
mcal04670
Leukocyte transendothelial migration
mcal04915
Estrogen signaling pathway
mcal04926
Relaxin signaling pathway
mcal05161
Hepatitis B
mcal05200
Pathways in cancer
mcal05202
Transcriptional misregulation in cancer
mcal05205
Proteoglycans in cancer
mcal05206
MicroRNAs in cancer
mcal05215
Prostate cancer
mcal05219
Bladder cancer
mcal05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09130 Environmental Information Processing
09132 Signal transduction
04668 TNF signaling pathway
110290048 (Mmp9)
09150 Organismal Systems
09151 Immune system
04657 IL-17 signaling pathway
110290048 (Mmp9)
04670 Leukocyte transendothelial migration
110290048 (Mmp9)
09152 Endocrine system
04915 Estrogen signaling pathway
110290048 (Mmp9)
04926 Relaxin signaling pathway
110290048 (Mmp9)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
110290048 (Mmp9)
05202 Transcriptional misregulation in cancer
110290048 (Mmp9)
05206 MicroRNAs in cancer
110290048 (Mmp9)
05205 Proteoglycans in cancer
110290048 (Mmp9)
09162 Cancer: specific types
05219 Bladder cancer
110290048 (Mmp9)
05215 Prostate cancer
110290048 (Mmp9)
09166 Cardiovascular disease
05418 Fluid shear stress and atherosclerosis
110290048 (Mmp9)
09172 Infectious disease: viral
05161 Hepatitis B
110290048 (Mmp9)
09176 Drug resistance: antineoplastic
01522 Endocrine resistance
110290048 (Mmp9)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mcal01002
]
110290048 (Mmp9)
Enzymes [BR:
mcal01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.35 gelatinase B
110290048 (Mmp9)
Peptidases and inhibitors [BR:
mcal01002
]
Metallo peptidases
Family M10
110290048 (Mmp9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_M10
fn2
Hemopexin
PT
PG_binding_1
Reprolysin_4
Peptidase_M66
DUF4953
Reprolysin_3
Motif
Other DBs
NCBI-GeneID:
110290048
NCBI-ProteinID:
XP_021012181
Ensembl:
MGP_CAROLIEiJ_G0024677
UniProt:
A0A6P5PCK5
LinkDB
All DBs
Position
2
AA seq
730 aa
AA seq
DB search
MSPWQPLLLALLAFGCSSAAPYQRQPTFVVFPKDLKTSNLTDTQLAEEYLYRYGYTRAAQ
MMGEEQSLRPALLMLQKQLSLPQTGELDSQTLKAIRTPRCGVPDVGRFQTFKGLKWDHHN
ITYWIQNYSEDLPRDVIDDAFARAFAVWGEVAPLTFTRVYGPEADIVIQFGVAEHGDGYP
FDGKDGLLAHAFPPGPGVQGDAHFDDDELWSLGKGVVIPTYYGNSNGAPCHFPFTFEGRS
YSACTTDGRNDGTPWCSTTADYDTDGKFGFCPSERLYTEHGNGEGKPCVFPFIFEGRSYS
ACTTKGRSDGYLWCATTANYDQDKLYGFCPTRVDATVVGGNSAGERCVFPFVFLGKQYSS
CTKEGRRDGRLWCATTSNFDTDKKWGFCPDQGYSLFLVAAHEFGHALGLDHSSVPEALMY
PLYSYLEGFPLNKDDIDGIQYLYGRGSKPDPRPPATTTTEPQPTAPPTMCPTVPPTAYPT
VGPTVGPTGAPSPGPTSSPSPGPTGAPSPGPTAPPTAGSSEASTESLSPAGNPCNVDIFD
AIAEIQGALHFFKDGWYWKFLNHRGSPLQGPFLIARTWPALPATLDSAFEDPQTKRIFFF
SGRQLWVYTGKTVLGPRSLDKLGLGPEVTHVSGLLPRRPGKALLFSNGHIWRFDLKSQKV
DPQSVIRMDKEFSGVPWNSHDIFQYQDKAYFCHGKFFWRVSFQNEVNKVDHEVNQVDDVG
YVAYGLLQCP
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgagcccctggcagcccctgctcctggctctcctggctttcggctgcagctctgctgcc
ccttaccagcgccagccgacttttgtggtcttccccaaagacctgaaaacctccaacctc
acggacacccagctggcagaggaatacttgtaccgctatggttacactcgggcagcccag
atgatgggggaggagcagtctctacggccggctttgctgatgcttcagaagcagctctcc
ctgccccagactggtgagctggacagccagacactaaaggccattcgaacaccacgctgt
ggtgtcccagatgtgggtcgattccaaaccttcaaaggcctcaagtgggaccatcataac
atcacatactggatccaaaactactctgaagacttgccgcgagacgtgatcgacgacgcc
ttcgcgcgcgccttcgcggtgtggggcgaggtggcaccgctcaccttcacccgcgtgtac
gggcccgaagcggacattgtcatccagtttggtgtcgcagagcacggagacgggtatccc
ttcgacggcaaggacggccttctggcacacgcctttccccctggccccggcgttcaggga
gatgcccatttcgacgacgacgagttgtggtcgctgggcaaaggcgtcgtgatccccact
tactatggaaactcaaatggtgccccatgtcactttcccttcacctttgagggacgctcc
tattcagcctgcaccacagacggccgcaacgacggcacgccttggtgtagcacgacagct
gactacgataccgacggcaaatttggtttctgccctagtgagagactctacacggagcac
ggcaacggagaaggcaaaccctgtgtgttcccgttcatctttgagggtcgctcctactct
gcctgcaccactaaaggccgctcggatggttatctctggtgtgccaccacagccaactat
gaccaggataaactgtatggcttctgccctacccgagtggacgcgaccgtagttgggggc
aactcggcaggagagcggtgcgtcttccccttcgtcttcctgggcaagcagtactcttcc
tgtaccaaagagggccgcagggatgggcgcctctggtgtgcgaccacatccaacttcgac
actgacaagaagtggggtttctgtccagaccaagggtacagcctgttcctggtggcagcg
cacgagttcggccatgcactgggcttagatcattccagcgtgccggaagcgctcatgtac
ccgctgtatagctacctcgagggcttccctctgaataaagacgacatagacggcatccag
tatctgtatggtcgtggctctaagcctgacccaaggcctccagccaccaccacaactgaa
ccacagccgacagcacctcccactatgtgtcccactgtacctcccacggcctatcccaca
gtgggccccacggttggccctacaggcgccccctcacctggccccacgagcagcccctca
cctggccctacaggcgccccctcacctggccctacagcgccccctaccgcgggctcttct
gaggcctctacagagtctttgagtccagcaggcaatccttgcaatgtggatatttttgat
gctattgcagagatccagggcgctctgcatttcttcaaggacggttggtactggaagttc
ctgaatcacagaggaagcccattacagggccccttcctcattgcccgcacgtggccagcc
ctgcctgcaacgctggactcagcctttgaggatccgcagaccaagaggattttcttcttc
tctggacgccaactgtgggtgtacacaggcaagaccgtgctgggccccaggagtctggat
aagttgggtctaggcccagaggtaacccacgtcagcgggcttctcccgcgtcgtcccggg
aaggctctgctgttcagcaacgggcatatctggagattcgacttgaagtctcagaaggtg
gatccccagagcgtcattcgcatggataaggagttctctggtgtgccctggaactcacac
gacatcttccagtaccaagacaaagcctatttctgccatggcaaattcttctggcgtgtg
agtttccaaaatgaggtgaacaaggtggaccatgaggtgaaccaggtggacgacgtgggc
tacgtggcctacggcctcctgcagtgcccttga
Mus caroli (Ryukyu mouse): 110301975
Help
Entry
110301975 CDS
T05910
Definition
(RefSeq) stromelysin-1
KO
K01394
matrix metalloproteinase-3 (stromelysin 1, progelatinase) [EC:
3.4.24.17
]
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04657
IL-17 signaling pathway
mcal04668
TNF signaling pathway
mcal05171
Coronavirus disease - COVID-19
mcal05202
Transcriptional misregulation in cancer
mcal05215
Prostate cancer
mcal05323
Rheumatoid arthritis
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09130 Environmental Information Processing
09132 Signal transduction
04668 TNF signaling pathway
110301975
09150 Organismal Systems
09151 Immune system
04657 IL-17 signaling pathway
110301975
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
110301975
09162 Cancer: specific types
05215 Prostate cancer
110301975
09163 Immune disease
05323 Rheumatoid arthritis
110301975
09172 Infectious disease: viral
05171 Coronavirus disease - COVID-19
110301975
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mcal01002
]
110301975
Enzymes [BR:
mcal01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.17 stromelysin 1
110301975
Peptidases and inhibitors [BR:
mcal01002
]
Metallo peptidases
Family M10
110301975
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Astacin
DUF4953
Reprolysin_5
Reprolysin_4
Reprolysin_3
Peptidase_M66
Motif
Other DBs
NCBI-GeneID:
110301975
NCBI-ProteinID:
XP_021028370
Ensembl:
MGP_CAROLIEiJ_G0031752
UniProt:
A0A6P5QDR3
LinkDB
All DBs
Position
9
AA seq
477 aa
AA seq
DB search
MKGLPVLLWLCVVVCSSYPLHDSARDDDASMELLQKYLENYYGLEKDVKQFIKKKDSSLI
VKKIQEMQKFLGLEMTGKLDSNTMELMHKPRCGVPDVGGFSTFPGSPKWRKSHITYRIVN
YTPDLPRQSVDSAIEKALKVWEEVTPLTFSRISEGEADIMISFAVGEHGDFVPFDGPGTV
LAHAYAPGPGINGDAHFDDDERWTEDVTGTNLFLVAAHELGHSLGLFHSAKAEALMYPVY
KSSTDLSRFHLSQDDVDGIQSLYGTPTASPDVLVVPTKSNSLEPETSPMCSSTLFFDAVS
TLRGEVLFFKDRHFWRKSLRTPEPGFYLISSFWPSLPSNIDAAYEVTNRDTVFIFKGNQF
WAIRGHEELAGYPKSIHTLGLPATVKKIDAAISNKEKRKTYFFVEDKYWRFDEKKQSMEP
GFPRKIAEDFPGVESRVDAVFEAFGFLYFFSGSSQLEFDPNAKKVTHILKSNSWFNC
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgaagggtcttccggtcctgctgtggctgtgtgtggttgtatgctcgtcctacccattg
catgacagtgcaagggatgatgatgctagtatggagcttctgcagaaatacctagaaaac
tactatggccttgaaaaagatgtgaaacaatttattaagaaaaaggacagtagtcttatt
gtcaaaaaaattcaagaaatgcagaagttcctcgggttggagatgacagggaagctggac
tccaacactatggagctgatgcacaagcccaggtgtggtgttcctgatgttggtggcttc
agtaccttcccaggttcgccaaaatggaggaaatcccacatcacctacaggattgtgaat
tacacaccagatttgccaagacagagtgtggattctgccattgagaaagctttgaaggtc
tgggaggaggtgaccccactcactttctccaggatctctgaaggagaggctgacataatg
atctcctttgcagttggagaacatggagactttgtcccttttgatgggcctggaacagtc
ttggctcatgcctatgcacctggaccagggattaatggagatgctcactttgacgatgat
gaacggtggacagaggatgtcactggtaccaacctattcctggttgccgctcatgaactt
ggccactccctgggtctctttcactcagccaaggctgaagctctgatgtacccagtctac
aagtcctccacagacttgtcccgtttccatctctctcaagacgatgtagatggtattcag
tccctctatggaactcccacagcatcccctgatgtcctcgtggtacccaccaagtctaat
tctctggaacctgagacatcaccaatgtgcagctctactttgttctttgatgcagtcagc
accctccggggagaagtcctgttttttaaagacaggcacttttggcgcaaatctctcagg
actcctgagcctggattttatttgatctcttcattttggccgtcccttccgtccaacata
gatgctgcatatgaggttactaacagagacactgttttcatttttaaaggaaatcagttc
tgggctatacgagggcacgaggagctagcaggttatcctaaaagcattcacaccctgggt
ctccctgcaaccgtgaagaagatcgatgctgccatttctaataaagagaaaaggaagacc
tacttctttgtagaggacaaatactggaggtttgatgagaagaaacaatccatggagcca
ggatttcccaggaagatagctgaggactttccaggtgttgaatcaagggtggatgctgtc
tttgaagcatttgggtttctctacttcttcagtggatcttcacagttggaatttgaccca
aatgccaaaaaagtgacccacatattgaagagcaatagctggtttaattgttaa
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integrated database retrieval system
