KEGG   Mus pahari (shrew mouse): 110315179
Entry
110315179         CDS       T05929                                 
Name
(RefSeq) interferon alpha-4-like
  KO
K05414  interferon alpha
Organism
mpah  Mus pahari (shrew mouse)
Pathway
mpah04060  Cytokine-cytokine receptor interaction
mpah04151  PI3K-Akt signaling pathway
mpah04217  Necroptosis
mpah04620  Toll-like receptor signaling pathway
mpah04621  NOD-like receptor signaling pathway
mpah04622  RIG-I-like receptor signaling pathway
mpah04623  Cytosolic DNA-sensing pathway
mpah04630  JAK-STAT signaling pathway
mpah04650  Natural killer cell mediated cytotoxicity
mpah04936  Alcoholic liver disease
mpah05152  Tuberculosis
mpah05160  Hepatitis C
mpah05161  Hepatitis B
mpah05162  Measles
mpah05163  Human cytomegalovirus infection
mpah05164  Influenza A
mpah05165  Human papillomavirus infection
mpah05167  Kaposi sarcoma-associated herpesvirus infection
mpah05168  Herpes simplex virus 1 infection
mpah05169  Epstein-Barr virus infection
mpah05170  Human immunodeficiency virus 1 infection
mpah05171  Coronavirus disease - COVID-19
mpah05200  Pathways in cancer
mpah05320  Autoimmune thyroid disease
mpah05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:mpah00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04630 JAK-STAT signaling pathway
    110315179
   04151 PI3K-Akt signaling pathway
    110315179
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    110315179
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    110315179
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    110315179
   04621 NOD-like receptor signaling pathway
    110315179
   04622 RIG-I-like receptor signaling pathway
    110315179
   04623 Cytosolic DNA-sensing pathway
    110315179
   04650 Natural killer cell mediated cytotoxicity
    110315179
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    110315179
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    110315179
   05161 Hepatitis B
    110315179
   05160 Hepatitis C
    110315179
   05171 Coronavirus disease - COVID-19
    110315179
   05164 Influenza A
    110315179
   05162 Measles
    110315179
   05168 Herpes simplex virus 1 infection
    110315179
   05163 Human cytomegalovirus infection
    110315179
   05167 Kaposi sarcoma-associated herpesvirus infection
    110315179
   05169 Epstein-Barr virus infection
    110315179
   05165 Human papillomavirus infection
    110315179
  09171 Infectious disease: bacterial
   05152 Tuberculosis
    110315179
  09163 Immune disease
   05320 Autoimmune thyroid disease
    110315179
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    110315179
  09167 Endocrine and metabolic disease
   04936 Alcoholic liver disease
    110315179
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:mpah04052]
    110315179
Cytokines and neuropeptides [BR:mpah04052]
 Cytokines
  Interferons
   110315179
SSDB
Motif
Pfam: Interferon STX6_10_61_N
Other DBs
NCBI-GeneID: 110315179
NCBI-ProteinID: XP_021044962
LinkDB
Position
Unknown
AA seq 189 aa
MARLCAFLVILIVMSYWSACSLGCHLPHTSNLRNKRALTLLEQLRRLPPLSCLKDRKDFG
FHLENVDAQQVQKAQAILVLRDLTQQILNLFTRKDSSATWNATLLDSFCNDLHQQLNDLK
ACVMQEVVVQEPPLIQEDSLAVRIYFHRISVYLRKKKHSPCAWEVVRAEVWRALSSSAKL
LARLSKEEE
NT seq 570 nt   +upstreamnt  +downstreamnt
atggctaggctctgtgctttccttgtgatcctgatagtgatgagctactggtcagcgtgt
tctctaggatgtcacctgcctcacacttctaacctcaggaacaagagggccttgacactc
ctggaacaactgagaagactcccccctctttcctgcctgaaggacaggaaggactttgga
ttccatttggagaatgtggatgcccaacaggtccagaaggctcaagccatccttgtgctg
agagaccttacccagcagatcttgaacctcttcacaagaaaggactcatctgctacttgg
aatgcaactctcctagactccttctgcaatgacctccaccagcagctcaacgacctcaaa
gcctgtgtgatgcaggaggttgtggtgcaggaacctcccctgatccaggaagactccctg
gctgtgagaatatacttccacaggatctctgtgtacctgagaaagaagaaacacagcccc
tgtgcctgggaagtggtcagagcagaagtctggagagccctgtcttcctcagccaagctg
ctggcaagactgagtaaggaggaggagtga

KEGG   Mus pahari (shrew mouse): 110315688
Entry
110315688         CDS       T05929                                 
Name
(RefSeq) interferon alpha-2-like
  KO
K05414  interferon alpha
Organism
mpah  Mus pahari (shrew mouse)
Pathway
mpah04060  Cytokine-cytokine receptor interaction
mpah04151  PI3K-Akt signaling pathway
mpah04217  Necroptosis
mpah04620  Toll-like receptor signaling pathway
mpah04621  NOD-like receptor signaling pathway
mpah04622  RIG-I-like receptor signaling pathway
mpah04623  Cytosolic DNA-sensing pathway
mpah04630  JAK-STAT signaling pathway
mpah04650  Natural killer cell mediated cytotoxicity
mpah04936  Alcoholic liver disease
mpah05152  Tuberculosis
mpah05160  Hepatitis C
mpah05161  Hepatitis B
mpah05162  Measles
mpah05163  Human cytomegalovirus infection
mpah05164  Influenza A
mpah05165  Human papillomavirus infection
mpah05167  Kaposi sarcoma-associated herpesvirus infection
mpah05168  Herpes simplex virus 1 infection
mpah05169  Epstein-Barr virus infection
mpah05170  Human immunodeficiency virus 1 infection
mpah05171  Coronavirus disease - COVID-19
mpah05200  Pathways in cancer
mpah05320  Autoimmune thyroid disease
mpah05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:mpah00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04630 JAK-STAT signaling pathway
    110315688
   04151 PI3K-Akt signaling pathway
    110315688
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    110315688
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    110315688
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    110315688
   04621 NOD-like receptor signaling pathway
    110315688
   04622 RIG-I-like receptor signaling pathway
    110315688
   04623 Cytosolic DNA-sensing pathway
    110315688
   04650 Natural killer cell mediated cytotoxicity
    110315688
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    110315688
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    110315688
   05161 Hepatitis B
    110315688
   05160 Hepatitis C
    110315688
   05171 Coronavirus disease - COVID-19
    110315688
   05164 Influenza A
    110315688
   05162 Measles
    110315688
   05168 Herpes simplex virus 1 infection
    110315688
   05163 Human cytomegalovirus infection
    110315688
   05167 Kaposi sarcoma-associated herpesvirus infection
    110315688
   05169 Epstein-Barr virus infection
    110315688
   05165 Human papillomavirus infection
    110315688
  09171 Infectious disease: bacterial
   05152 Tuberculosis
    110315688
  09163 Immune disease
   05320 Autoimmune thyroid disease
    110315688
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    110315688
  09167 Endocrine and metabolic disease
   04936 Alcoholic liver disease
    110315688
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:mpah04052]
    110315688
Cytokines and neuropeptides [BR:mpah04052]
 Cytokines
  Interferons
   110315688
SSDB
Motif
Pfam: Interferon
Other DBs
NCBI-GeneID: 110315688
NCBI-ProteinID: XP_021045340
LinkDB
Position
Unknown
AA seq 188 aa
MARLCAFLVILIVMSHWSACSLGCDLPHTFNLRNKRALTLLEQLRRLPPLSCLKDRKDFG
LPLEKVDTQHVQKAQAILVLRDLTQQILNLFTTKASSAAWNATLLDSFCNDLHQQLNDLK
ACVMQEVVGQEPPLTQEDSLMAVRIYFHRITVYLRKKKHSPCAWEVVRVEVWRALSSSAK
LLARLSEE
NT seq 567 nt   +upstreamnt  +downstreamnt
atggcaaggctctgtgctttcctcgtgatcctgatagtgatgagccactggtcagcgtgt
tctctaggatgtgacctgcctcacactttcaacctcaggaacaagagggccttgacactc
ctggaacaactgagaagactcccccctctttcctgcctgaaggacaggaaggactttgga
ttgcctttggagaaggtggatacccaacatgtccagaaggctcaagccatccttgtgctg
agagatcttacccagcagatcttgaacctcttcacaacaaaggcttcatcagctgcttgg
aatgcaactctcctagactccttctgcaatgacctccatcagcagctcaatgacctcaaa
gcctgtgtgatgcaggaggttgtgggacaggaacctcctctgacccaggaagactccctg
atggctgtgagaatatacttccacaggatcactgtgtaccttagaaagaagaaacacagc
ccctgtgcctgggaggtggtcagagtagaagtctggagagccctgtcttcctcagccaag
ctgctggcaagactgagtgaggagtaa

KEGG   Mus pahari (shrew mouse): 110317140
Entry
110317140         CDS       T05929                                 
Symbol
Il6
Name
(RefSeq) interleukin-6
  KO
K05405  interleukin 6
Organism
mpah  Mus pahari (shrew mouse)
Pathway
mpah01521  EGFR tyrosine kinase inhibitor resistance
mpah01523  Antifolate resistance
mpah04060  Cytokine-cytokine receptor interaction
mpah04061  Viral protein interaction with cytokine and cytokine receptor
mpah04066  HIF-1 signaling pathway
mpah04068  FoxO signaling pathway
mpah04151  PI3K-Akt signaling pathway
mpah04218  Cellular senescence
mpah04620  Toll-like receptor signaling pathway
mpah04621  NOD-like receptor signaling pathway
mpah04623  Cytosolic DNA-sensing pathway
mpah04625  C-type lectin receptor signaling pathway
mpah04630  JAK-STAT signaling pathway
mpah04640  Hematopoietic cell lineage
mpah04657  IL-17 signaling pathway
mpah04659  Th17 cell differentiation
mpah04668  TNF signaling pathway
mpah04672  Intestinal immune network for IgA production
mpah04931  Insulin resistance
mpah04932  Non-alcoholic fatty liver disease
mpah04933  AGE-RAGE signaling pathway in diabetic complications
mpah04936  Alcoholic liver disease
mpah05010  Alzheimer disease
mpah05020  Prion disease
mpah05022  Pathways of neurodegeneration - multiple diseases
mpah05132  Salmonella infection
mpah05133  Pertussis
mpah05134  Legionellosis
mpah05135  Yersinia infection
mpah05142  Chagas disease
mpah05143  African trypanosomiasis
mpah05144  Malaria
mpah05146  Amoebiasis
mpah05152  Tuberculosis
mpah05161  Hepatitis B
mpah05162  Measles
mpah05163  Human cytomegalovirus infection
mpah05164  Influenza A
mpah05166  Human T-cell leukemia virus 1 infection
mpah05167  Kaposi sarcoma-associated herpesvirus infection
mpah05168  Herpes simplex virus 1 infection
mpah05169  Epstein-Barr virus infection
mpah05171  Coronavirus disease - COVID-19
mpah05200  Pathways in cancer
mpah05202  Transcriptional misregulation in cancer
mpah05321  Inflammatory bowel disease
mpah05323  Rheumatoid arthritis
mpah05332  Graft-versus-host disease
mpah05410  Hypertrophic cardiomyopathy
mpah05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:mpah00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04630 JAK-STAT signaling pathway
    110317140 (Il6)
   04668 TNF signaling pathway
    110317140 (Il6)
   04066 HIF-1 signaling pathway
    110317140 (Il6)
   04068 FoxO signaling pathway
    110317140 (Il6)
   04151 PI3K-Akt signaling pathway
    110317140 (Il6)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    110317140 (Il6)
   04061 Viral protein interaction with cytokine and cytokine receptor
    110317140 (Il6)
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    110317140 (Il6)
 09150 Organismal Systems
  09151 Immune system
   04640 Hematopoietic cell lineage
    110317140 (Il6)
   04620 Toll-like receptor signaling pathway
    110317140 (Il6)
   04621 NOD-like receptor signaling pathway
    110317140 (Il6)
   04623 Cytosolic DNA-sensing pathway
    110317140 (Il6)
   04625 C-type lectin receptor signaling pathway
    110317140 (Il6)
   04659 Th17 cell differentiation
    110317140 (Il6)
   04657 IL-17 signaling pathway
    110317140 (Il6)
   04672 Intestinal immune network for IgA production
    110317140 (Il6)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    110317140 (Il6)
   05202 Transcriptional misregulation in cancer
    110317140 (Il6)
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    110317140 (Il6)
   05161 Hepatitis B
    110317140 (Il6)
   05171 Coronavirus disease - COVID-19
    110317140 (Il6)
   05164 Influenza A
    110317140 (Il6)
   05162 Measles
    110317140 (Il6)
   05168 Herpes simplex virus 1 infection
    110317140 (Il6)
   05163 Human cytomegalovirus infection
    110317140 (Il6)
   05167 Kaposi sarcoma-associated herpesvirus infection
    110317140 (Il6)
   05169 Epstein-Barr virus infection
    110317140 (Il6)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    110317140 (Il6)
   05135 Yersinia infection
    110317140 (Il6)
   05133 Pertussis
    110317140 (Il6)
   05134 Legionellosis
    110317140 (Il6)
   05152 Tuberculosis
    110317140 (Il6)
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    110317140 (Il6)
   05144 Malaria
    110317140 (Il6)
   05142 Chagas disease
    110317140 (Il6)
   05143 African trypanosomiasis
    110317140 (Il6)
  09163 Immune disease
   05323 Rheumatoid arthritis
    110317140 (Il6)
   05321 Inflammatory bowel disease
    110317140 (Il6)
   05332 Graft-versus-host disease
    110317140 (Il6)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    110317140 (Il6)
   05020 Prion disease
    110317140 (Il6)
   05022 Pathways of neurodegeneration - multiple diseases
    110317140 (Il6)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    110317140 (Il6)
   05410 Hypertrophic cardiomyopathy
    110317140 (Il6)
  09167 Endocrine and metabolic disease
   04936 Alcoholic liver disease
    110317140 (Il6)
   04932 Non-alcoholic fatty liver disease
    110317140 (Il6)
   04931 Insulin resistance
    110317140 (Il6)
   04933 AGE-RAGE signaling pathway in diabetic complications
    110317140 (Il6)
  09176 Drug resistance: antineoplastic
   01521 EGFR tyrosine kinase inhibitor resistance
    110317140 (Il6)
   01523 Antifolate resistance
    110317140 (Il6)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:mpah04052]
    110317140 (Il6)
Cytokines and neuropeptides [BR:mpah04052]
 Cytokines
  Interleukins
   110317140 (Il6)
SSDB
Motif
Pfam: IL6 IL23
Other DBs
NCBI-GeneID: 110317140
NCBI-ProteinID: XP_021047197
Ensembl: MGP_PahariEiJ_G0021821
LinkDB
Position
2:24245342..24252239
AA seq 211 aa
MKFLSARDFHPVAFLGLMLVTTTAFPTSQVRRGDFTEDTTPNRPVYTTSQVGGLITQVLR
EILAMRKELCNGNPDCMNNDDALSENNLKLPEIQRNDGCFQTGYNQEICLLKITSGLLEY
QIYLEYMKNNLKDNKKDKARVIQRDTETLIYIFNQEVKDLYKIVLPSPISDPLLMEKMES
QKEWLRTKTIQFILKALEEFLKVTLRSTRQT
NT seq 636 nt   +upstreamnt  +downstreamnt
atgaagttcctctctgcaagagacttccatccagttgccttcttgggactgatgctggtg
acaaccacggccttccctacttcacaagtccggagaggagacttcacagaggacaccact
cccaacagaccagtatacaccacttcacaagtcggaggcttaattacacaagttctcagg
gaaatcttggcaatgagaaaagagttgtgcaatggcaatcctgattgtatgaacaacgat
gatgcactttcagaaaacaatctgaaacttccagagatacaaagaaatgatggatgcttc
caaactggatacaatcaggaaatttgcctattgaaaattacctctggtcttctggagtac
caaatctacctggagtacatgaagaacaacttaaaagataacaagaaagacaaagccaga
gtcattcagagagatacagaaaccctaatttatatcttcaatcaagaggtaaaagattta
tataaaatagtccttcctagcccaatttccgatcctctcctaatggagaagatggagtca
cagaaggagtggctaaggaccaagaccatccaattcatcttgaaagcacttgaagaattt
ctaaaagtcactttgagatctactcggcaaacctag

KEGG   Mus pahari (shrew mouse): 110317734
Entry
110317734         CDS       T05929                                 
Name
(RefSeq) cardiotrophin-2
  KO
K24382  cardiotrophin 2
Organism
mpah  Mus pahari (shrew mouse)
Pathway
mpah04060  Cytokine-cytokine receptor interaction
mpah04630  JAK-STAT signaling pathway
Brite
KEGG Orthology (KO) [BR:mpah00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04630 JAK-STAT signaling pathway
    110317734
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    110317734
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:mpah04052]
    110317734
Cytokines and neuropeptides [BR:mpah04052]
 Cytokines
  CSF and other factors
   110317734
SSDB
Motif
Pfam: PRF CNTF LIF_OSM IL11 EPO_TPO
Other DBs
NCBI-GeneID: 110317734
NCBI-ProteinID: XP_021048076
Ensembl: MGP_PahariEiJ_G0013723
LinkDB
Position
1:complement(97199515..97207049)
AA seq 204 aa
MYCLLATPLCLLSLLLPPLSPAAPISPSEPIGQAYSLALYMQKNTSALLQTYLQHQGSPF
SDPGFSAPELQLSTLPSAAVSFKTWHAMEDAERLSRVQGAFLALTQHLQLVGDDQSYLNP
GSPILLAQLGAARLRAQGLLGNMAAIMTALGLPIPPEEDTLGLVPFGASAFERKCRGYIV
TREYGHWTDRAVRDLALLKAKYPA
NT seq 615 nt   +upstreamnt  +downstreamnt
atgtactgcctgctggcaactcccctatgcctactgagcctgctgttgccacccctcagt
cctgcggcccccatctccccatcagagcccatcggtcaagcctacagcctggctctctac
atgcagaagaacacgtcagcattgctacagacctatctccagcaccagggcagccccttc
agcgaccccggcttctcagctcccgagctccagctcagcaccctgccttctgcagctgtc
tccttcaagacctggcatgcaatggaagatgcagagcggctaagccgagtccagggagcc
tttctggccttgacccagcacctccagctcgtgggggacgaccagagttatctgaatcct
ggcagtcctatcctgctggcccagctaggagcagcaagactcagggcccaaggcctattg
ggcaacatggctgctatcatgacggctctagggctgcccatccctccagaagaggatact
ctggggcttgtcccttttggggcctcagcctttgaaaggaaatgcagaggctacatagtg
acccgagaatatggtcactggacagacagggctgtgagggacttggctctccttaaggct
aagtacccagcatag

KEGG   Mus pahari (shrew mouse): 110317740
Entry
110317740         CDS       T05929                                 
Symbol
Ctf1
Name
(RefSeq) cardiotrophin-1 isoform X1
  KO
K05422  cardiotrophin 1
Organism
mpah  Mus pahari (shrew mouse)
Pathway
mpah04060  Cytokine-cytokine receptor interaction
mpah04630  JAK-STAT signaling pathway
Brite
KEGG Orthology (KO) [BR:mpah00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04630 JAK-STAT signaling pathway
    110317740 (Ctf1)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    110317740 (Ctf1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:mpah04052]
    110317740 (Ctf1)
Cytokines and neuropeptides [BR:mpah04052]
 Cytokines
  CSF and other factors
   110317740 (Ctf1)
SSDB
Motif
Pfam: LIF_OSM PRF
Other DBs
NCBI-GeneID: 110317740
NCBI-ProteinID: XP_021048090
Ensembl: MGP_PahariEiJ_G0013722
LinkDB
Position
1:97193345..97198195
AA seq 203 aa
MSQREGSLEDHQSGSSISFLPHLEAKIRQTHNLARLLTKYAEQLLEEYVQQQGEPFGLPG
FSPPRLPLAGLSGPAPSHAGLPVSERLRQDAAALSVLPALLDAVRRRQAELNPRAPRLLR
SLEDAARQVRALGAAVETVLAALGAAARGPGPEPVTVATLFTANSTAGIFSAKVLGFHVC
GLYGEWVSRTEGDLGQLVPGGVA
NT seq 612 nt   +upstreamnt  +downstreamnt
atgagccagagggagggaagtctggaagaccaccagtctggctcctcaatctcattccta
ccccatttggaggccaagatccgccagacacacaaccttgcccgcctcctgaccaaatat
gcagaacaactgctggaagaatacgtgcagcaacagggagagccctttgggctgccgggc
ttctcaccaccgcggctgccgctggccggcctgagtggcccggctccgagccatgcaggg
ctaccggtgtctgagcggctgcggcaggatgcagccgccctgagtgtgctgcccgcgctg
ttggatgcggtccgccgccgccaggcggagctgaacccgcgcgccccgcgcctgctgcgg
agcctggaggacgcggcccgccaggttcgggccctgggcgccgcggtggagacggtgctg
gccgctctgggcgctgcagcccgcgggcccgggccagagcccgtcaccgtcgccaccctc
ttcacggccaacagcactgcaggcatcttctcagccaaggtgctggggttccacgtgtgc
ggcctctatggcgagtgggtgagccgcaccgagggcgacctgggccagctggtgccaggg
ggcgtcgcctga

KEGG   Mus pahari (shrew mouse): 110320556
Entry
110320556         CDS       T05929                                 
Symbol
Il2
Name
(RefSeq) interleukin-2
  KO
K05429  interleukin 2
Organism
mpah  Mus pahari (shrew mouse)
Pathway
mpah04060  Cytokine-cytokine receptor interaction
mpah04061  Viral protein interaction with cytokine and cytokine receptor
mpah04151  PI3K-Akt signaling pathway
mpah04625  C-type lectin receptor signaling pathway
mpah04630  JAK-STAT signaling pathway
mpah04658  Th1 and Th2 cell differentiation
mpah04659  Th17 cell differentiation
mpah04660  T cell receptor signaling pathway
mpah04672  Intestinal immune network for IgA production
mpah04940  Type I diabetes mellitus
mpah05135  Yersinia infection
mpah05142  Chagas disease
mpah05162  Measles
mpah05166  Human T-cell leukemia virus 1 infection
mpah05171  Coronavirus disease - COVID-19
mpah05200  Pathways in cancer
mpah05320  Autoimmune thyroid disease
mpah05321  Inflammatory bowel disease
mpah05330  Allograft rejection
mpah05332  Graft-versus-host disease
Brite
KEGG Orthology (KO) [BR:mpah00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04630 JAK-STAT signaling pathway
    110320556 (Il2)
   04151 PI3K-Akt signaling pathway
    110320556 (Il2)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    110320556 (Il2)
   04061 Viral protein interaction with cytokine and cytokine receptor
    110320556 (Il2)
 09150 Organismal Systems
  09151 Immune system
   04625 C-type lectin receptor signaling pathway
    110320556 (Il2)
   04660 T cell receptor signaling pathway
    110320556 (Il2)
   04658 Th1 and Th2 cell differentiation
    110320556 (Il2)
   04659 Th17 cell differentiation
    110320556 (Il2)
   04672 Intestinal immune network for IgA production
    110320556 (Il2)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    110320556 (Il2)
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    110320556 (Il2)
   05171 Coronavirus disease - COVID-19
    110320556 (Il2)
   05162 Measles
    110320556 (Il2)
  09171 Infectious disease: bacterial
   05135 Yersinia infection
    110320556 (Il2)
  09174 Infectious disease: parasitic
   05142 Chagas disease
    110320556 (Il2)
  09163 Immune disease
   05320 Autoimmune thyroid disease
    110320556 (Il2)
   05321 Inflammatory bowel disease
    110320556 (Il2)
   05330 Allograft rejection
    110320556 (Il2)
   05332 Graft-versus-host disease
    110320556 (Il2)
  09167 Endocrine and metabolic disease
   04940 Type I diabetes mellitus
    110320556 (Il2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:mpah04052]
    110320556 (Il2)
   00536 Glycosaminoglycan binding proteins [BR:mpah00536]
    110320556 (Il2)
Cytokines and neuropeptides [BR:mpah04052]
 Cytokines
  Interleukins
   110320556 (Il2)
Glycosaminoglycan binding proteins [BR:mpah00536]
 Heparan sulfate / Heparin
  Cytokines
   110320556 (Il2)
SSDB
Motif
Pfam: IL2 Rx_N CDK5RAP3 Ribonuc_P_40 DUF7288
Other DBs
NCBI-GeneID: 110320556
NCBI-ProteinID: XP_021052288
Ensembl: MGP_PahariEiJ_G0026385
LinkDB
Position
4:complement(31532587..31537746)
AA seq 166 aa
MYSMQLASCVALTLVFLVNSAPTSSPTSSSTSSSTAEAQQQQQHLEQLLMDLQELLSRME
NYRNLKLPRMLTFKFYLPKQATELKDLQCLEDELGALQRVLDLTQSKSFQLEDAENFISN
IRVTVIKLKGSENTLECQFADESVTVVEFLRRWIAFCQSIISARPQ
NT seq 501 nt   +upstreamnt  +downstreamnt
atgtacagcatgcagctcgcatcctgtgtcgcactgacacttgtgttccttgtcaacagt
gcacccacttcaagccccacttcaagttccacttcaagctctacagcggaagcacagcag
cagcagcagcacctggagcagctgttgatggacctacaggagctcttgagcaggatggag
aattacaggaacctgaaactccccaggatgctcaccttcaaattttacttgcccaagcag
gccacagaattgaaagatcttcagtgcctagaagatgaactcggagctctgcagcgtgtg
ctggatttgactcaaagcaaaagctttcaattggaagatgctgagaatttcatcagtaat
atcagagtaactgttataaaactaaagggctctgaaaacacacttgagtgccaatttgct
gatgagtcagtgactgtggtggaatttctgaggagatggatagccttctgtcaaagcatc
atctcagcaaggcctcaataa

KEGG   Mus pahari (shrew mouse): 110320680
Entry
110320680         CDS       T05929                                 
Symbol
Il12a
Name
(RefSeq) interleukin-12 subunit alpha
  KO
K05406  interleukin 12A
Organism
mpah  Mus pahari (shrew mouse)
Pathway
mpah04060  Cytokine-cytokine receptor interaction
mpah04620  Toll-like receptor signaling pathway
mpah04622  RIG-I-like receptor signaling pathway
mpah04625  C-type lectin receptor signaling pathway
mpah04630  JAK-STAT signaling pathway
mpah04658  Th1 and Th2 cell differentiation
mpah04936  Alcoholic liver disease
mpah04940  Type I diabetes mellitus
mpah05133  Pertussis
mpah05134  Legionellosis
mpah05140  Leishmaniasis
mpah05142  Chagas disease
mpah05143  African trypanosomiasis
mpah05144  Malaria
mpah05145  Toxoplasmosis
mpah05146  Amoebiasis
mpah05152  Tuberculosis
mpah05162  Measles
mpah05164  Influenza A
mpah05168  Herpes simplex virus 1 infection
mpah05171  Coronavirus disease - COVID-19
mpah05200  Pathways in cancer
mpah05321  Inflammatory bowel disease
mpah05330  Allograft rejection
mpah05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:mpah00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04630 JAK-STAT signaling pathway
    110320680 (Il12a)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    110320680 (Il12a)
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    110320680 (Il12a)
   04622 RIG-I-like receptor signaling pathway
    110320680 (Il12a)
   04625 C-type lectin receptor signaling pathway
    110320680 (Il12a)
   04658 Th1 and Th2 cell differentiation
    110320680 (Il12a)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    110320680 (Il12a)
  09172 Infectious disease: viral
   05171 Coronavirus disease - COVID-19
    110320680 (Il12a)
   05164 Influenza A
    110320680 (Il12a)
   05162 Measles
    110320680 (Il12a)
   05168 Herpes simplex virus 1 infection
    110320680 (Il12a)
  09171 Infectious disease: bacterial
   05133 Pertussis
    110320680 (Il12a)
   05134 Legionellosis
    110320680 (Il12a)
   05152 Tuberculosis
    110320680 (Il12a)
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    110320680 (Il12a)
   05144 Malaria
    110320680 (Il12a)
   05145 Toxoplasmosis
    110320680 (Il12a)
   05140 Leishmaniasis
    110320680 (Il12a)
   05142 Chagas disease
    110320680 (Il12a)
   05143 African trypanosomiasis
    110320680 (Il12a)
  09163 Immune disease
   05321 Inflammatory bowel disease
    110320680 (Il12a)
   05330 Allograft rejection
    110320680 (Il12a)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    110320680 (Il12a)
  09167 Endocrine and metabolic disease
   04940 Type I diabetes mellitus
    110320680 (Il12a)
   04936 Alcoholic liver disease
    110320680 (Il12a)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:mpah04052]
    110320680 (Il12a)
   00536 Glycosaminoglycan binding proteins [BR:mpah00536]
    110320680 (Il12a)
Cytokines and neuropeptides [BR:mpah04052]
 Cytokines
  Interleukins
   110320680 (Il12a)
Glycosaminoglycan binding proteins [BR:mpah00536]
 Heparan sulfate / Heparin
  Cytokines
   110320680 (Il12a)
SSDB
Motif
Pfam: IL12 DUF2564
Other DBs
NCBI-GeneID: 110320680
NCBI-ProteinID: XP_021052456
Ensembl: MGP_PahariEiJ_G0026502
LinkDB
Position
4:60826610..60834361
AA seq 236 aa
MVNVPTASPSASSSSSQCRSSMCQSRYLLFLATLAFLNYLSLARVIPVSGPARCLSQSQN
LLKTTDDMVKTAREKLKHYSCTAEDIDHEDITRDKTSTLETCLPLELHKNESCLATRDAS
STTRGSCLPPQKTSLMMTLCLGSIYEDLKMYQTEFQAINAALQNHNHQQIILDKSMLVAI
DELMQSLNHNGETQRQNPPVGVADPYRVKMKLCILLHAFSTRVVTINRVMSYLSSS
NT seq 711 nt   +upstreamnt  +downstreamnt
atggtcaatgttccaaccgcctcaccctcggcatccagcagctcctctcagtgccggtcc
agcatgtgtcaatcacgctacctcctctttttggccacccttgccttcctaaactacctc
agtttggccagggtcattccagtctctggacctgccaggtgtcttagccagtcccaaaat
ctgctgaagaccacagatgacatggtgaagacggccagagaaaaactgaaacattattcc
tgcactgctgaagacatcgatcatgaagacatcacacgggacaaaaccagcacactggag
acctgtttaccactggaactacacaagaacgagagttgcctggctactagagatgcttct
tccacaacaagagggagctgcctgcccccacagaagacttctttgatgatgaccctgtgc
cttggtagcatctatgaggacttgaagatgtaccagacagagttccaggccataaatgca
gcacttcagaatcacaatcatcagcagatcattctggacaaaagcatgctggtagctatt
gatgagctgatgcagtctctgaatcataacggcgagactcagcgccagaacccccccgtg
ggagtagcagatccttacagagtgaaaatgaagctctgcatcctgctccatgccttcagc
acccgagtggtgaccatcaacagggtgatgagctacctgagctcttcctga

KEGG   Mus pahari (shrew mouse): 110320935
Entry
110320935         CDS       T05929                                 
Symbol
Il21
Name
(RefSeq) interleukin-21 isoform X1
  KO
K05434  interleukin 21
Organism
mpah  Mus pahari (shrew mouse)
Pathway
mpah04060  Cytokine-cytokine receptor interaction
mpah04630  JAK-STAT signaling pathway
mpah04659  Th17 cell differentiation
mpah05321  Inflammatory bowel disease
Brite
KEGG Orthology (KO) [BR:mpah00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04630 JAK-STAT signaling pathway
    110320935 (Il21)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    110320935 (Il21)
 09150 Organismal Systems
  09151 Immune system
   04659 Th17 cell differentiation
    110320935 (Il21)
 09160 Human Diseases
  09163 Immune disease
   05321 Inflammatory bowel disease
    110320935 (Il21)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:mpah04052]
    110320935 (Il21)
Cytokines and neuropeptides [BR:mpah04052]
 Cytokines
  Interleukins
   110320935 (Il21)
SSDB
Motif
Pfam: IL15
Other DBs
NCBI-GeneID: 110320935
NCBI-ProteinID: XP_021052672
Ensembl: MGP_PahariEiJ_G0026386
LinkDB
Position
4:complement(31629226..31638385)
AA seq 162 aa
MERTLVCLVVIFLGTVAHKSSPQGPDRLLIRLHHLIDIVEQLKIYENDLDPELLSAPQDV
KVHCEHAAFACFQKATLKPSNPGNNKTFIGDLVAQLRRRLPARRRGKKQKHITKCPSCDS
YEKRTPKEFLERLKWLLQKVRTLNAFLSLPCCPRVPLVPSDS
NT seq 489 nt   +upstreamnt  +downstreamnt
atggagaggacccttgtctgtctggtagtcatcttcttggggacagtggcccataaatca
agcccccaagggccagatcgcctcctgattagacttcatcaccttatagacattgttgaa
cagctgaaaatctatgaaaatgacttggatcctgaacttctatcagctccacaagatgta
aaggtgcactgtgagcatgcagcttttgcctgttttcagaaggccacactcaagccatca
aaccctggaaacaataagacattcatcggtgacttggtggcacagctgaggaggaggctg
cctgccaggaggcgaggaaagaaacagaagcacataactaaatgcccatcctgtgattcg
tatgagaaaagaacacccaaggaattcctagaaagactaaaatggctccttcaaaaggta
cgcaccttaaatgcatttctttcacttccatgttgtccccgggtacctcttgtgcccagt
gactcatag

KEGG   Mus pahari (shrew mouse): 110321006
Entry
110321006         CDS       T05929                                 
Symbol
Il7
Name
(RefSeq) interleukin-7 isoform X1
  KO
K05431  interleukin 7
Organism
mpah  Mus pahari (shrew mouse)
Pathway
mpah04060  Cytokine-cytokine receptor interaction
mpah04151  PI3K-Akt signaling pathway
mpah04630  JAK-STAT signaling pathway
mpah04640  Hematopoietic cell lineage
mpah05200  Pathways in cancer
Brite
KEGG Orthology (KO) [BR:mpah00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04630 JAK-STAT signaling pathway
    110321006 (Il7)
   04151 PI3K-Akt signaling pathway
    110321006 (Il7)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    110321006 (Il7)
 09150 Organismal Systems
  09151 Immune system
   04640 Hematopoietic cell lineage
    110321006 (Il7)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    110321006 (Il7)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:mpah04052]
    110321006 (Il7)
   00536 Glycosaminoglycan binding proteins [BR:mpah00536]
    110321006 (Il7)
Cytokines and neuropeptides [BR:mpah04052]
 Cytokines
  Interleukins
   110321006 (Il7)
Glycosaminoglycan binding proteins [BR:mpah00536]
 Heparan sulfate / Heparin
  Cytokines
   110321006 (Il7)
SSDB
Motif
Pfam: IL7
Other DBs
NCBI-GeneID: 110321006
NCBI-ProteinID: XP_021052746
Ensembl: MGP_PahariEiJ_G0026278
LinkDB
Position
4:complement(3721535..3762140)
AA seq 156 aa
MFHVSFRYIFGIPPLILVLLPATSSECHIKDKEGKAYESVLMISIDELVRDKMTGTDSNC
LNNEPNFFKKHLCDDTKEAAFLNRAARKLKQFLKMNISEEFNVHLLRVSQGTQTLVNCTS
KEEKNVKEQKRNDACFLKRLLREIKTCWNKILKGSI
NT seq 471 nt   +upstreamnt  +downstreamnt
atgttccatgtttcttttagatatatctttggaattcctccactgatccttgttctgctg
cctgccacgtcatctgagtgccacattaaagacaaagaaggtaaagcatatgagagtgtg
ctgatgatcagcatcgatgaattggtacgtgacaaaatgacaggaactgatagcaattgc
ctgaataatgaaccaaacttttttaaaaaacatctatgtgatgatacaaaggaagctgct
tttctaaatcgtgctgctcgcaagttgaagcaatttcttaaaatgaatatcagtgaagaa
ttcaatgtccacttactgagagtgtcacaaggcacacaaacactggtgaactgcacaagt
aaggaagaaaaaaacgtaaaggaacagaaaaggaatgatgcatgtttcctaaagagacta
ctgagagagataaaaacttgttggaataaaattttgaagggcagtatatga

KEGG   Mus pahari (shrew mouse): 110322491
Entry
110322491         CDS       T05929                                 
Symbol
Il20
Name
(RefSeq) interleukin-20 isoform X1
  KO
K22667  interleukin 20
Organism
mpah  Mus pahari (shrew mouse)
Pathway
mpah04060  Cytokine-cytokine receptor interaction
mpah04061  Viral protein interaction with cytokine and cytokine receptor
mpah04630  JAK-STAT signaling pathway
Brite
KEGG Orthology (KO) [BR:mpah00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04630 JAK-STAT signaling pathway
    110322491 (Il20)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    110322491 (Il20)
   04061 Viral protein interaction with cytokine and cytokine receptor
    110322491 (Il20)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:mpah04052]
    110322491 (Il20)
Cytokines and neuropeptides [BR:mpah04052]
 Cytokines
  Interleukins
   110322491 (Il20)
SSDB
Motif
Pfam: IL10
Other DBs
NCBI-GeneID: 110322491
NCBI-ProteinID: XP_021054825
Ensembl: MGP_PahariEiJ_G0027797
LinkDB
Position
5:complement(105199606..105203118)
AA seq 176 aa
MKGFGLAFGLFSAVGFLLWTPLTGLKTLHLGSCVITANLQAIQKEFSEIRDSVQAEDANI
DIRILRTTESLKDIKPLDRCCFLRRLVRFYLDRVFKVYQTPDHHTLRKISSLANSFLIIK
KDLSVCHSHMACHCGEEAMEKYNQILSHFTELELQAAVVKALGELGILLRWMEEML
NT seq 531 nt   +upstreamnt  +downstreamnt
atgaaaggctttggtcttgcctttggactgttctctgctgtgggttttcttctctggact
cctttaactgggctcaagacccttcatttgggaagctgtgtgatcactgcaaacctacag
gcaatacaaaaggaattttctgagattcgggatagtgtgcaagctgaagatgcaaatatt
gacatcagaattttaaggacaactgagtctttgaaagacataaagcctttggataggtgc
tgcttcctccgccgtctagtgagattctatctggacagggtattcaaagtctaccagacc
cctgaccaccacaccctgagaaagatcagcagcctcgccaactcctttcttatcatcaag
aaggacctctcagtctgtcactctcacatggcatgtcattgtggggaagaagcaatggag
aaatacaaccaaattctgagtcacttcacagagttggagcttcaggcagcggtggtaaag
gctttgggggaactaggcattcttctgagatggatggaggagatgctgtag

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