Pedobacter heparinus: Phep_4260
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Entry
Phep_4260 CDS
T00978
Name
(GenBank) outer membrane efflux protein
KO
K12340
outer membrane protein
Organism
phe
Pedobacter heparinus
Pathway
phe01501
beta-Lactam resistance
phe01503
Cationic antimicrobial peptide (CAMP) resistance
phe02020
Two-component system
phe03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
phe00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
Phep_4260
09132 Signal transduction
02020 Two-component system
Phep_4260
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Phep_4260
01503 Cationic antimicrobial peptide (CAMP) resistance
Phep_4260
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phe02000
]
Phep_4260
02044 Secretion system [BR:
phe02044
]
Phep_4260
01504 Antimicrobial resistance genes [BR:
phe01504
]
Phep_4260
Transporters [BR:
phe02000
]
Other transporters
Pores ion channels [TC:
1
]
Phep_4260
Secretion system [BR:
phe02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
Phep_4260
RTX toxin transporter
Phep_4260
Multiple protein transporter
Phep_4260
RaxAB-RaxC type I secretion system protein
Phep_4260
Antimicrobial resistance genes [BR:
phe01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
Phep_4260
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
Phep_4260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
FAM110_N
IFN-gamma
Motif
Other DBs
NCBI-ProteinID:
ACU06451
UniProt:
C6XXE5
LinkDB
All DBs
Position
5136662..5137978
Genome browser
AA seq
438 aa
AA seq
DB search
MIHKSIRLSFLTFIIPGILYAQDIKKLSLQEAIALGIENSKNLKLSQNKVEQAIAQLNMV
KDNALPSAKASFLYNHAEIPTNTLSIGGGNPIHLPKRADAFIGTAAVEELVYGGGKLKYA
EESTRLLSDVARLDADKNKEEISYAVINTYYSLFKVMQSKKVIAQNLESIDSQLKQAQRF
FEQGIVTKNDVLRFQLQQANISLTDMEAENNRKIINYNLDILLGLNENTQIEIADPDAAA
KAIGPLSSYIDLALGSRQELRQLDLQNKVADVNIKSVKANTLPTVGVGANLYYINPSGKF
VPPTDQYIMPVTLGANISWNIGNLWTNKHKVTDARIQQKEVELQKDILSDQVKTEINSNY
QRYQLALNKIRVLETSIAQATENDKLLASKYKNNVASAIDRIDAETLLYQAKINLELAKA
DAGLAYYTLLKSTGKISQ
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgatacataaatcaatcagattaagcttcttaacatttattatcccgggaatcctctac
gcccaggacataaaaaaattaagcttgcaggaggctatcgcccttgggatagagaacagc
aaaaatctaaaactatcgcaaaataaagtagagcaggccattgcgcagttaaacatggtt
aaagacaatgctttaccaagcgcaaaggcatcgtttttgtacaaccatgccgaaatcccc
accaacaccttaagcattggcggcggcaacccgatccatctgcccaagcgcgcagatgcc
tttatcggtactgctgctgttgaagagctggtttatggcggcggaaaattgaaatatgcc
gaagaatctacccggctgctttccgatgtggcgcgcctggatgcggataaaaacaaagaa
gagatcagctacgctgtcatcaacacctattattccttgtttaaagtgatgcaaagcaaa
aaagttatcgcacaaaacctggagtctatcgacagtcagcttaaacaggcgcagcgcttt
tttgaacagggaattgtaaccaaaaatgatgtattgaggttccagctgcaacaggcaaat
atctcgctaaccgatatggaggcagaaaacaaccgcaagatcattaactacaacctggat
attttactcggattaaacgaaaatacgcagatcgaaattgccgatccggatgccgcagca
aaagccatcggacctttaagcagttacatcgacctcgccctgggcagcagacaggaactc
agacagctggaccttcaaaacaaggtggccgatgtcaatatcaagtcggtaaaagccaat
acccttcctactgttggggtaggcgctaacctctattacattaacccgagtggcaaattt
gtaccgccaacagaccagtacattatgccggtaaccctgggggccaacatctcctggaat
attggtaacctgtggaccaacaaacacaaggtaaccgatgccagaattcagcaaaaagag
gtagagctacaaaaagacatcctttctgaccaggttaaaacggagatcaacagcaattac
cagcgctaccagctggccctaaataagatcagggtactggaaacatccattgcccaggct
acagaaaacgacaaattgctggcctcaaaatataaaaacaatgtcgcttcggcaatagac
aggattgatgccgaaaccctgctttatcaggctaaaattaacctcgaactggctaaagcc
gatgcaggtctggcttattatactttactaaaatctaccggaaaaatttctcaataa
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