Pongo abelii (Sumatran orangutan): 100174087
Help
Entry
100174087 CDS
T01416
Symbol
RAPGEF3
Name
(RefSeq) rap guanine nucleotide exchange factor 3
KO
K08014
Rap guanine nucleotide exchange factor 3
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon04015
Rap1 signaling pathway
pon04024
cAMP signaling pathway
pon04072
Phospholipase D signaling pathway
pon04081
Hormone signaling
pon04261
Adrenergic signaling in cardiomyocytes
pon04670
Leukocyte transendothelial migration
pon04720
Long-term potentiation
pon04726
Serotonergic synapse
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
100174087 (RAPGEF3)
04072 Phospholipase D signaling pathway
100174087 (RAPGEF3)
04024 cAMP signaling pathway
100174087 (RAPGEF3)
09133 Signaling molecules and interaction
04081 Hormone signaling
100174087 (RAPGEF3)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
100174087 (RAPGEF3)
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
100174087 (RAPGEF3)
09156 Nervous system
04726 Serotonergic synapse
100174087 (RAPGEF3)
04720 Long-term potentiation
100174087 (RAPGEF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
cNMP_binding
RasGEF_N
DEP
Motif
Other DBs
NCBI-GeneID:
100174087
NCBI-ProteinID:
NP_001127058
Ensembl:
ENSPPYG00000038555
UniProt:
Q5NVT0
LinkDB
All DBs
Position
10:complement(45435777..45471791)
Genome browser
AA seq
935 aa
AA seq
DB search
MAQKEEITQPLWETVGWPGESCWQVGLAVEDSPALGAPRVGALPDVVPEGTLLNMVLRRM
HRPRSCSYQLLLEHQRPSCIQGLRWTPLTNSEESLDFSESLEQASTERVLRAGRQLHRHL
LATCPNLIRDRKYHLRLYRQCCSGRELVDGILALGLGVHSRSQVVGICQVLLDEGALCHV
KHDWAFQDRDAQFYRFPGPEPEPVGAHEMEEELAEAVALLSQRGPDALLTVALRKPPGQR
TDEELDLIFEELLHIKAVAHLSNSVKRELAAVLLFEPHSKAGTVLFSQGDKGTSWYIIWK
GSVNVVTHGKGLVTTLHEGDDFGQLALVNDAPRAATIILREDNCHFLRVDKQDFNRIIKD
VEAKTMRLEEHGKVVLVLERASQGAGPSRPPTPGRNRYTVMSGTPEKILELLLEAMGPDS
SAHDPTETFLSDFLLTHRVFMPSAQLCAALLHHFHAEPAGGSEQERSTYVCNKRQQILRL
VSQWVALYGSMLHTDPVATSFLQKLSDLVGRDTRLSNLLREQWPERRRYHRLENGCGNAS
PQMKARNLPVWLPNQDEPLPGSSCAIRVGDKVPYDICRPDHSALTLQLPVTASVRDVMAA
LAQEDGWTKGQVLVKVNSAGEAVGLQPDARGVATSLGLNERLFVVNPQEVHELTPHPDQL
GPTVGSAEGLDLVSAKDLAGQLTDHDWSLFNSIHQVELIHYVLGPQHLRDVTTANLERFM
RRFNELQYWVATELCLCSVPGSRAQLLRKFIKLAAHLKEQKNLNSFFAVMFGLSNSAISR
LAHTWERLPHKVRKLYSALERLLDPSWNHRVYRLALAKLSPPVIPFMPLLLKDMTFIHEG
NHTLVENLINFEKMRMMARAARMLHQCRSHNPVPLSPLRSRVSHLHEDSQVARISTCSEQ
SLSTRSPASTWAYVQQLKVIDNQRELSRLSRELEP
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaggaagaaataacgcagccgctttgggaaactgtgggctggccaggtgag
agctgctggcaggtgggcctggctgtggaggatagcccagctctgggagcgccgcgggtg
ggagccctccctgacgtggtgccggaggggacactactcaacatggtgttgagaaggatg
caccggccccgaagctgctcctaccagctgctgctggagcaccagcgtccgagctgcatc
caggggctgcgatggacaccactcaccaacagtgaggagtccctggatttcagcgagagc
ctggagcaggcctccacagagcgggtgctcagggctgggaggcagctgcatcggcatctg
ctggccacctgcccaaacctcatccgagaccggaagtaccaccttaggctctatcggcag
tgctgctctggccgggagctggtggatgggatcttggccctgggacttggggtccattcc
cggagccaagttgtgggaatctgccaggtgctgctggatgaaggtgccctctgccatgtg
aaacacgactgggccttccaggaccgagatgcccaattctaccgattccctgggcccgag
cccgagcccgtgggagctcatgagatggaggaggagttggccgaagctgtagccctgctc
tcccagcgggggcctgacgccctgctcactgtggcacttcgaaagcccccaggtcagcgc
acggatgaagagctggacctcatctttgaggagttgctgcacatcaaggctgtggcccac
ctctccaactcggtgaagcgagaattagcggctgttctgctctttgaaccacacagcaag
gcggggaccgtgttgttcagccagggggacaagggcacttcgtggtacattatctggaag
ggatctgtcaacgtggtgacccatggcaaggggctggtgaccaccctgcatgagggagat
gactttggacagctggctctggtgaatgatgcaccccgggcagccaccatcatcctgcga
gaagacaactgtcatttcctgcgtgtggacaagcaggacttcaaccgtatcatcaaggat
gtggaggcaaagaccatgcggctggaagaacatggcaaagtggtgctggtgctggagaga
gcctctcagggcgccggcccttcccgacccccaaccccaggcaggaaccggtatacagtg
atgtctggcaccccagagaagatcctagagcttctgttggaggccatgggaccagattcc
agtgctcatgacccaacagagacattcctcagcgacttcctcctgacccacagggtcttc
atgcccagcgctcaactctgcgctgcccttctgcaccacttccatgcggagcctgcgggt
ggcagcgagcaggagcgcagcacctacgtctgcaacaagaggcagcagatcttgcggctt
gtcagccagtgggtggccctgtatggctccatgctccacactgatcctgtggccaccagc
ttcctccagaaactctcggacctggtgggcagggacacccgactcagcaacctgctgagg
gagcagtggccagagaggcggcgataccacaggttggagaatggctgtgggaatgcatct
cctcagatgaaggcccggaacttgcctgtttggctccccaaccaggacgagccccttcct
ggcagcagctgtgccatccgagttggggataaagtcccctatgacatctgccggccagac
cactcagcgttgaccctgcagctgcctgtgacagcctccgttagagacgtgatggcggcg
ttggcccaggaggatggctggaccaaggggcaggtgctggtgaaggtcaattctgcaggt
gaagccgttggcctgcagccagatgcccgtggtgtggccacatctctggggctcaatgag
cggctctttgttgtcaacccacaggaagtgcatgagctgacgccacaccctgaccagctg
gggcccactgtgggctctgctgaggggctggacctggtgagtgccaaggacctggcaggc
cagctgacggaccacgactggagccttttcaacagtatccaccaggtggagctgatccac
tatgtgctgggcccccagcatctgcgggatgtcaccaccgccaacctggagcgcttcatg
cgccgcttcaacgagctgcagtactgggtggccaccgagctgtgtctctgctccgtgccc
ggctcccgggcccagctactcaggaagttcattaagctggcagcccacctcaaggagcag
aagaatctcaattccttctttgccgtcatgtttggcctcagcaactcggccatcagccgc
ctagcccacacctgggagaggctgcctcacaaagtccggaagctgtactccgccctggag
aggctgctggatccctcatggaaccaccgggtgtaccgactggccctcgccaagctctcc
cctcctgtcattcccttcatgccccttcttctcaaagacatgaccttcattcatgaggga
aaccacacactagtggagaatctcatcaactttgagaagatgagaatgatggccagagcc
gcgcggatgctgcaccagtgccgaagccacaaccctgtgcctctctcaccactcagaagc
cgagtttcccacctccacgaggacagccaggtggcgaggatttccacatgctcggagcag
tccctgagcacccggagtccagccagcacctgggcttatgtccagcagctgaaggtcatc
gacaaccagcgggaactctcccgcctctcccgagagctggagccatga
Pongo abelii (Sumatran orangutan): 100189911
Help
Entry
100189911 CDS
T01416
Symbol
RAPGEF4
Name
(RefSeq) rap guanine nucleotide exchange factor 4
KO
K04351
Rap guanine nucleotide exchange factor 4
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon04015
Rap1 signaling pathway
pon04024
cAMP signaling pathway
pon04072
Phospholipase D signaling pathway
pon04081
Hormone signaling
pon04261
Adrenergic signaling in cardiomyocytes
pon04670
Leukocyte transendothelial migration
pon04911
Insulin secretion
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
100189911 (RAPGEF4)
04072 Phospholipase D signaling pathway
100189911 (RAPGEF4)
04024 cAMP signaling pathway
100189911 (RAPGEF4)
09133 Signaling molecules and interaction
04081 Hormone signaling
100189911 (RAPGEF4)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
100189911 (RAPGEF4)
09152 Endocrine system
04911 Insulin secretion
100189911 (RAPGEF4)
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
100189911 (RAPGEF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pon04131
]
100189911 (RAPGEF4)
Membrane trafficking [BR:
pon04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
100189911 (RAPGEF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
cNMP_binding
DEP
RasGEF_N
RA_2
Motif
Other DBs
NCBI-GeneID:
100189911
NCBI-ProteinID:
NP_001128948
Ensembl:
ENSPPYG00000012938
UniProt:
Q5R8C3
LinkDB
All DBs
Position
11:75264872..75646398
Genome browser
AA seq
931 aa
AA seq
DB search
MVATHAAHSSSSAEWIACLDKRPLERSSEDVDIIFTRLKEVKAFEKFHPNLLHQICLCGY
YENLEKGITLFRQGDIGTNWYAVLAGSLDVKVSETSSHQDAVTICTLGIGTAFGESILDN
TPRHATIVTRESSELLRIEQKDFKALWEKYRQYMAGLLAPPYGVMETGSNNDRIPDKENV
PSEKILRAGKILRNAILSRAPHMIRDRKYHLKTYRQCCVGTELVDWMMQQTPCVHSRTQA
VGMWQVLLEDGVLNHVDQEHHFQDKYLFYRFLDDENEDAPLPTEEEKKECDEELQDTMLL
LSQMGPDAHMRMILRKPPGQRTVDDLEIIYEELLHIKALSHLSTTVKRELAGVLIFESHA
KGGTVLFNQGEEGTSWYIILKGSVNVVIYGKGVVCTLHEGDDFGKLALVNDAPRAASIVL
REDNCHFLRVDKEDFNRILRDVEANTVRLKEHDQDVLVLEKVPAGNRASNQGNSQPQQKY
TVMSGTPEKILEHFLETIRLEATLNEATDSVLNDFIMMHCVFMPNTQLCPALVAHYHAQP
SQGTEQEKMDYALNNKRRVIRLVLQWAAMYGDLLQEDDVSMAFLEEFYVSVSDDARMIAA
LKEQLPELEKIVKQISEDAKAPQKKHKVLLQQFNTGDERAQKRQPIRGSDEVLFKVYCMD
HTYTTIRVPVAASVKEVISAVADKLGSGEGLIVVKMSSGGEKVVLKPNDVSVFTTLTING
RLFACPREQFDSLTPLPEQEGPTVGTVGTFELMSSKDLAYQMTIYDWELFNCVHELELIY
HTFGRHNFKKTTANLDLFLRRFNEIQFWVVTEICLCSQLSKRVQLLKKFIKIAAHCKEYK
NLNSFFAIAMGLSNVAVSRLALTWEKLPSKFKKFYAEFESLMDPSRNHRAYRLTVAKLEP
PVIPFMPLLIKAHDCKYGQNSEILQEPTLQS
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atggtcgctacgcacgctgcccattcttcctcctccgccgagtggatcgcctgcctggat
aaaagaccattggagcgatccagcgaagatgtggatataatcttcactcgactgaaagaa
gttaaagcttttgagaaatttcacccaaatctccttcatcagatttgcttatgtggttat
tatgagaatctggaaaagggaataacattatttcgccagggtgatattggaacaaactgg
tatgctgtcctggcagggtctttggatgttaaagtatctgagaccagcagtcaccaggat
gctgtgaccatctgtaccctgggaattgggacggcctttggagagtccattctggacaac
acaccccgccatgcaaccatcgttaccagggagagcagtgaactgctccgcatcgagcag
aaggacttcaaggcactatgggagaaatatcgacagtatatggcaggacttctggctcct
ccttatggtgttatggaaacgggctctaacaatgacaggattcctgacaaggagaacgtc
ccttcagagaagatcctcagagctggaaaaattttacgaaatgccattctctctcgagcg
cctcacatgataagagatagaaaataccacctaaagacatacagacaatgctgtgtggga
actgagcttgtagactggatgatgcagcagacaccatgtgttcactcccggactcaagct
gttggcatgtggcaagtcctgttagaagacggtgttctcaaccacgtggaccaggagcac
catttccaagacaaatatttattctatcgatttctggatgatgagaacgaggatgcccct
ttgcctactgaggaggagaagaaggagtgtgatgaggagctccaggacaccatgctgctg
ctgtcacagatgggccccgatgcccacatgaggatgatcctccgcaaaccacctggccag
aggactgtggatgacctagagattatctatgaggagcttcttcatattaaagccttatcc
catctttctaccacagtgaaacgagagttagcgggtgttctcatttttgagtctcatgcc
aaaggagggactgtgttgtttaaccagggggaagaaggtacctcctggtacattattcta
aaaggatcagtgaatgtagtcatttatggaaagggtgtggtctgcaccctgcatgaagga
gatgacttcggcaagttagcactagtgaatgatgccccacgagctgcctctatcgtctta
cgagaagataactgccatttcttaagagtagacaaggaggatttcaaccggatcctgagg
gacgtggaggcgaatacagtcagacttaaagaacatgaccaagatgtcttggtgctggag
aaggtcccagcagggaacagagcttctaatcaaggaaactcacagcctcagcaaaagtat
actgtgatgtcaggaacacctgaaaaaattttagagcattttctagaaacaatacgcctt
gaggcaactttaaatgaagcaacagattctgttttaaatgactttattatgatgcactgt
gtttttatgccaaatacccagctttgcccagcactggtggcccactaccacgcacagcct
tcacaaggtacagaacaggagaaaatggattatgccctcaacaataagaggcgagtcatc
cgcctggttctacagtgggctgccatgtatggagacctcctacaagaggatgatgtgtct
atggccttcctggaggagttttatgtatctgtatcagatgatgcccggatgattgctgcc
ctcaaggagcaactgccagagttggagaagattgtcaagcaaatctcagaagatgcaaag
gcaccacaaaagaagcacaaggttcttttgcaacagttcaatacaggtgatgagagagcc
cagaagcgccagcctatccgcggctctgatgaagttctgtttaaggtctattgcatggac
cacacctacacaaccattcgggtgccagtggccgcctcagtgaaggaagtcatcagtgca
gttgccgacaagctgggctccggggagggcctgatcgtagtcaagatgagttccggagga
gaaaaggtggtgctcaaacctaatgatgtttcggtatttacgacgctcaccattaatgga
cgcctgtttgcttgcccgcgagagcaattcgattcactgactcccttaccagaacaggaa
ggcccaactgttggaacagtgggaacttttgaactgatgagctccaaagatttagcatac
cagatgacaatttatgattgggaactcttcaactgcgtgcatgagctggagctaatctat
cacacatttggaaggcataattttaaaaagaccacagcaaacttggatttgttcctgagg
agatttaatgaaattcagttttgggtcgtcactgagatctgcctttgttctcagctcagc
aagcgtgttcagctattaaaaaaatttattaagatagcagcccactgtaaggagtataaa
aatctgaattccttttttgccatcgccatgggactaagtaacgttgctgtgagccgcttg
gcactcacgtgggagaaactgccaagcaagttcaagaagttctatgcggagtttgaaagt
ttaatggacccttcaaggaaccacagggcctacaggctgacagtagctaagctggaacct
cctgtcatccccttcatgcctttgctcattaaagcgcatgattgcaaatacggccagaac
agtgagatactacaggagccaacccttcaatcctga
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