Pan troglodytes (chimpanzee): 100616520
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Entry
100616520 CDS
T01005
Name
(RefSeq) HLA class II histocompatibility antigen, DQ beta 1 chain isoform X3
KO
K06752
MHC class II antigen
Organism
ptr
Pan troglodytes (chimpanzee)
Pathway
ptr04145
Phagosome
ptr04514
Cell adhesion molecules
ptr04612
Antigen processing and presentation
ptr04640
Hematopoietic cell lineage
ptr04658
Th1 and Th2 cell differentiation
ptr04659
Th17 cell differentiation
ptr04672
Intestinal immune network for IgA production
ptr04940
Type I diabetes mellitus
ptr05140
Leishmaniasis
ptr05145
Toxoplasmosis
ptr05150
Staphylococcus aureus infection
ptr05152
Tuberculosis
ptr05164
Influenza A
ptr05166
Human T-cell leukemia virus 1 infection
ptr05168
Herpes simplex virus 1 infection
ptr05169
Epstein-Barr virus infection
ptr05310
Asthma
ptr05320
Autoimmune thyroid disease
ptr05321
Inflammatory bowel disease
ptr05322
Systemic lupus erythematosus
ptr05323
Rheumatoid arthritis
ptr05330
Allograft rejection
ptr05332
Graft-versus-host disease
ptr05416
Viral myocarditis
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
100616520
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100616520
09150 Organismal Systems
09151 Immune system
04640 Hematopoietic cell lineage
100616520
04612 Antigen processing and presentation
100616520
04658 Th1 and Th2 cell differentiation
100616520
04659 Th17 cell differentiation
100616520
04672 Intestinal immune network for IgA production
100616520
09160 Human Diseases
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
100616520
05164 Influenza A
100616520
05168 Herpes simplex virus 1 infection
100616520
05169 Epstein-Barr virus infection
100616520
09171 Infectious disease: bacterial
05150 Staphylococcus aureus infection
100616520
05152 Tuberculosis
100616520
09174 Infectious disease: parasitic
05145 Toxoplasmosis
100616520
05140 Leishmaniasis
100616520
09163 Immune disease
05310 Asthma
100616520
05322 Systemic lupus erythematosus
100616520
05323 Rheumatoid arthritis
100616520
05320 Autoimmune thyroid disease
100616520
05321 Inflammatory bowel disease
100616520
05330 Allograft rejection
100616520
05332 Graft-versus-host disease
100616520
09166 Cardiovascular disease
05416 Viral myocarditis
100616520
09167 Endocrine and metabolic disease
04940 Type I diabetes mellitus
100616520
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ptr04147
]
100616520
Exosome [BR:
ptr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100616520
Exosomal proteins of epithelial cells
100616520
Exosomal proteins of breast milk
100616520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_II_beta
C1-set
Ig_3
ig
C2-set_2
Ig_2
MHC_I
Marek_A
Motif
Other DBs
NCBI-GeneID:
100616520
NCBI-ProteinID:
XP_003339166
Ensembl:
ENSPTRG00000018018
UniProt:
H2QSR6
LinkDB
All DBs
Position
6:complement(32179167..32185976)
Genome browser
AA seq
261 aa
AA seq
DB search
MSWKKALRIPGGLRAATVTLVLAMLSTPVAEGRDSPEDFVYQFKGMCYFTNGTERVRLVT
RYIYNREEYVRFDSDVGVYRAVTPLGPPAAEYWNSQKEVLERTRAELDTVCRHNYQLELR
TTLQRRVEPTVTISPSRTEALNHHNLLVCSVTDFYPGQIKVRWFRNDQEETTGVVSTPLI
RNGDWTFQILVMLEMTPQHGDVYTCHVEHPSLQNPITVEWRAQSESAQSKMLSGVGGFVL
GLIFLGLGLIIHHRSQKGLLH
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgtcttggaaaaaggctttgcggatccccggaggccttcgggcagcaactgtgaccttg
gtgctggcgatgctgagcaccccagtagctgagggcagagactctcccgaggatttcgtg
taccagtttaagggcatgtgctacttcaccaacgggacggagcgcgtgcgtcttgtgacg
agatacatctataaccgagaggagtacgtgcgcttcgacagcgacgtgggggtgtaccgg
gcggtgacgccgctggggccgcctgccgccgagtactggaacagccagaaggaagtcctg
gagaggacccgggcggagttggacacggtgtgcagacacaactaccagttggagctccgc
acgaccttgcagcggcgagtggagcccacagtgaccatctccccatccaggacagaggcc
ctcaaccaccacaacctgctggtctgctcagtgacagatttctatccaggccagatcaaa
gtccgatggtttcggaatgaccaggaggagacaaccggcgttgtgtccaccccccttatt
aggaacggtgactggaccttccagatcctggtgatgctggaaatgactccccagcatgga
gatgtctacacctgccacgtggagcaccccagcctccagaaccccatcaccgtggagtgg
cgggctcagtctgaatctgcccagagcaagatgctgagtggcgttggaggcttcgtgctg
gggctgatcttcctcgggctgggccttattatccatcacaggagtcagaaagggctcctg
cactga
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