Rhodopseudomonas palustris BisB5: RPD_1907
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Entry
RPD_1907 CDS
T00345
Name
(GenBank) Type I secretion outer membrane protein, TolC
KO
K12340
outer membrane protein
Organism
rpd
Rhodopseudomonas palustris BisB5
Pathway
rpd01501
beta-Lactam resistance
rpd01503
Cationic antimicrobial peptide (CAMP) resistance
rpd02020
Two-component system
rpd03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
rpd00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
RPD_1907
09132 Signal transduction
02020 Two-component system
RPD_1907
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RPD_1907
01503 Cationic antimicrobial peptide (CAMP) resistance
RPD_1907
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rpd02000
]
RPD_1907
02044 Secretion system [BR:
rpd02044
]
RPD_1907
01504 Antimicrobial resistance genes [BR:
rpd01504
]
RPD_1907
Transporters [BR:
rpd02000
]
Other transporters
Pores ion channels [TC:
1
]
RPD_1907
Secretion system [BR:
rpd02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
RPD_1907
RTX toxin transporter
RPD_1907
Multiple protein transporter
RPD_1907
RaxAB-RaxC type I secretion system protein
RPD_1907
Antimicrobial resistance genes [BR:
rpd01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
RPD_1907
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
RPD_1907
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
ABE39142
UniProt:
Q139U7
LinkDB
All DBs
Position
complement(2144351..2145769)
Genome browser
AA seq
472 aa
AA seq
DB search
MDWWTGIISNAGSAARRSSAGLCAAAIGVALTGPVSAEGLPDALAKAYQFNPQLNAERAR
QRATDENVPAALSGYRPQIVASLGTGLQAVRNLLPDNTIQTATLKPWTIGVTVTQTLFNG
FRTANSVRVAELQVKSGREALRNVGQGVLLDAVTAYTNVLANQALVAAQKSNVDFLGQTL
DITNKRLNAGDVTPTDTAQAEARLNRGRADLNAAEVNLAVSEATYAQVVGNAPSRLSPAS
PVDRLLPRSREDAVSLAMQGNPAVLAAGFDVDVATTTIKVAEGSLLPSITLQGSASRSRA
TDSTLGSQGVDQASVVGQIAAPIYDGGFAAAQTRQSKEIASQSRLVLDQIRNQSRTAAIG
AWVSNEGSKIAVSASESEVRAAEIALKGVSREAQGGQRTTVDVLNSQQDLTQARARLIGA
QRDRVIASYTLLSAIGRLDVKTLGLNTPDYLPDVHYHQVRDAWHGLRTPSGD
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggattggtggactggaattatcagcaacgcgggaagcgctgcacgtcgttcgtccgcg
ggactttgtgccgcggcgatcggtgtcgcgctgacaggaccggtatctgccgaggggctc
cccgacgcacttgccaaggcctatcagttcaatccgcagctcaatgccgaacgcgcccgg
cagcgcgcgactgacgagaacgtgccggcggcgctatccggctaccgaccgcagatcgtc
gccagcctcggcaccgggttgcaggcggttcgcaatctgctgcccgacaacaccattcag
accgcgacgctgaagccgtggaccatcggcgtcaccgtgacgcagacgctgttcaacggc
ttcagaaccgccaacagtgtgcgggtcgccgagctgcaggtgaaatccggccgcgaggcg
ctgcgcaatgtcggccagggcgtgctgctcgacgcggtgaccgcctacactaacgtgctc
gccaatcaggcgctggtggcggcgcagaagtccaacgtcgactttctcggccagacgctc
gacatcaccaacaagcggctgaatgccggcgacgtcaccccgaccgatactgcgcaggcc
gaagcgcggctgaatcgcggccgcgccgatctcaacgccgccgaagtgaacctcgcggtc
agcgaggcaacctatgcgcaggtggtcggtaacgcgccgtcacggctcagccccgcatcg
ccggtcgaccggctgctgccgcggagccgcgaagacgcagtttcgttggcgatgcagggt
aatcccgcggtgctggcggcgggcttcgacgtcgacgtcgcgaccacgacgatcaaggtc
gccgaaggcagcttattgccgtccatcaccttgcaggggagcgccagccgaagccgcgcc
accgattcgactctcggcagccagggcgttgaccaagcctcggtcgtcggccagatcgcc
gcgccgatctacgacggcggatttgccgcggcgcaaacccggcagtcgaaggaaatcgcg
tcgcagagccggctggtgctcgatcagatccgcaaccaatcgcgtacggctgcgatcggc
gcctgggtgagcaatgaaggctccaagattgccgtcagcgcctcggaatcggaagttcgc
gccgccgaaatcgcgttgaagggcgtcagccgcgaggcccagggcggtcagcggaccacc
gtcgacgtgctgaactcacagcaggatctgacacaggcgcgggcgcgtctgatcggcgcc
cagcgcgatcgcgtgatcgcctcctacaccctgctcagcgcaatcggccgactcgacgtc
aagacgctcgggctgaacacgccggactatctgccggatgtacactatcaccaggttcgt
gacgcttggcatggcctgcgcacgccgtccggtgactag
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