Salicibibacter kimchii: DT065_03320
Help
Entry
DT065_03320 CDS
T05571
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rue
Salicibibacter kimchii
Brite
KEGG Orthology (KO) [BR:
rue00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rue03032
]
DT065_03320
03400 DNA repair and recombination proteins [BR:
rue03400
]
DT065_03320
Enzymes [BR:
rue01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
DT065_03320
DNA replication proteins [BR:
rue03032
]
Prokaryotic type
DNA Topoisomerases
DT065_03320
DNA repair and recombination proteins [BR:
rue03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DT065_03320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
zf-C4_Topoisom
Toprim
RNA_POL_M_15KD
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AXF55142
UniProt:
A0A345BW11
LinkDB
All DBs
Position
complement(627040..629112)
Genome browser
AA seq
690 aa
AA seq
DB search
MADYLVIVESPAKAKTIGKYLGKKYTVKASMGHVRDLPKSQMGVDVDKRYDPKYITIRGK
GPILQELKQAAKKAKKVYLAADPDREGEAIAWHLAFSLGIDEETPCRVVFNEITKPAIQE
AFKNPRTINTDLVDAQQARRILDRLVGYNISPLLWKKVKKGLSAGRVQSIAVKMINDRER
EIQQFEPEEYWNIKGTFSYGKETFEAQFHGKGNKKEALKTKEDVDGVLGRIKGDDFTIAS
VQKKERRRNPVQPFITSSLQQEAARKLNFRAKKTMMVAQQLYEGIELGKEGTVGLITYMR
TDSTRISETAKEEARTYIQEKYGKEYVGTDRKQKKQGENTQDAHEAIRPTFVAREPKALK
DYLSRDQLRLYRLIWERLMASRMAPAVMDTMTADLENGGMIFRATGSKIKFQGFMKVYVE
GSDDNKKEESKLLPALEEGNTATKKTLEPTQHFTQPPPRYTEARLVRTMEELGIGRPSTY
APTLDTVQRRGYVALQDRRFVPTELGEIVLDLIVEFFPEILNVEFTAQMESDLDDVEEGK
ENWIEIIDTFYQGFEKRLKVADQEMEEVEIKDEPVGEDCERCEHPMVYKMGRYGRFMACS
NFPDCRNTKAILKPIGVKCPRCKEGNVVERKSKKQRTFYGCDRYPACEFVSWDKPIARPC
PKCQSLLVEKKAKKTVRVQCSECDYREDPN
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggcagattaccttgtaatcgttgaatctcccgctaaagcaaaaacaattggaaagtat
ttaggaaaaaaatatacggtgaaagcatcgatgggacacgtgcgtgatttgccaaaatca
caaatgggtgtggatgtggataagaggtatgatccaaaatacattacgattcgcgggaaa
ggcccgattttacaagaattgaaacaagcagcaaaaaaagcaaaaaaagtctatcttgct
gcggaccccgaccgtgaaggagaagcgattgcctggcatttggcattcagcttgggaatc
gatgaagaaacgccttgccgggttgtgtttaatgaaattaccaagccggcgattcaggaa
gcattcaaaaacccgcgcaccattaatacggatctcgttgatgcccagcaagcacgtcga
attttggaccggctcgttggatacaacatcagtccgttgctttggaaaaaagtgaaaaaa
ggattaagcgccggacgtgtacaatcaattgccgtaaagatgattaatgatcgggagaga
gaaattcaacagtttgaacctgaagagtactggaatataaaaggaaccttttcgtatgga
aaagaaacattcgaagcccaatttcacggaaaaggaaacaaaaaagaggctttgaagaca
aaagaagatgtggatggtgttttgggtcgaataaaaggggacgattttaccatcgcttcc
gtgcagaaaaaagaacgtcgacgaaatcccgtgcagccgtttatcacctcatcactccag
caggaagcggctcgaaagcttaatttccgggcaaaaaagacgatgatggtggcccagcaa
ttgtacgaagggatagagcttggcaaagaaggcaccgtcggtctgattacgtatatgcgt
accgactccacccgtatttccgaaacggccaaagaagaagcgaggacctacattcaagaa
aaatatggaaaggaatatgtaggcaccgaccgaaaacaaaagaaacagggagagaacacc
caagacgcccacgaagcgattcgtccaacgtttgtcgctcgtgaaccaaaagcactcaaa
gactacttgagcagggatcaattaagactctaccgcctgatttgggaacgtttgatggcg
agtcgtatggcgcctgcggttatggatacgatgacggctgatttagaaaatggcggaatg
atctttcgggcaacagggtctaagataaagtttcaaggtttcatgaaagtctatgtggag
ggcagcgatgataacaaaaaagaagaaagcaaactgcttccagcgctcgaagaaggaaat
acggcgacaaaaaaaacgttggagccgactcaacattttacgcaaccgcccccaaggtac
acggaagcgcgtctcgtacgaacgatggaagaactcgggatcggtcgtccttccacgtac
gcaccaacgttggataccgttcaaagacgcggatacgtcgcgctgcaggaccgtcgtttc
gtgccgacggagcttggagagattgttcttgatctcatcgtcgagtttttccccgaaatc
ttaaacgtggagtttaccgcccagatggaatcggacctggatgacgtggaggaaggaaaa
gaaaactggatcgagatcatcgacaccttctaccaagggtttgaaaaacgattaaaagtc
gccgatcaggaaatggaagaagtggaaatcaaagatgaaccggtaggggaagattgtgaa
agatgtgagcatcccatggtatacaaaatgggaagatatggaagatttatggcctgctcc
aactttcccgattgccggaacacaaaagcgatcttaaagccgatcggcgtaaaatgtcca
cggtgtaaagaagggaacgttgtggagagaaaaagcaaaaaacaacggacattctacggc
tgtgatcgttaccctgcgtgcgaattcgtgtcttgggataagccaattgcacggccgtgc
ccaaagtgtcaaagcctcctcgtcgagaaaaaagccaaaaaaacggtacgggtgcaatgc
tcggaatgcgactatcgcgaggacccaaactag
DBGET
integrated database retrieval system
