KEGG   DISEASE: Tooth agenesis
Entry
H00625                      Disease                                
Name
Tooth agenesis;
Hypodontia
  Subgroup
Dental anomalies and short stature (DASS)
Description
Tooth agenesis, or hypodontia/oligodontia, refers to the congenital absence of a few teeth without any systemic disorders. Tooth development is a complex process that involves interactions between the oral epithelium and underlying mesenchyme. Perturbation of this process results in tooth agenesis. This disease could be inherited as either an autosomal dominant, autosomal recessive, or X-linked trait.
Category
Congenital malformation
Brite
Human diseases in ICD-11 classification [BR:br08403]
 20 Developmental anomalies
  Structural developmental anomalies primarily affecting one body system
   Structural developmental anomalies of the face, mouth or teeth
    LA30  Structural developmental anomalies of teeth and periodontal tissues
     H00625  Tooth agenesis
Pathway-based classification of diseases [BR:br08402]
 Signal transduction
  nt06505  WNT signaling
   H00625  Tooth agenesis
  nt06507  TGFB signaling
   H00625  Tooth agenesis
  nt06516  TNF signaling
   H00625  Tooth agenesis
Pathway
hsa04310  Wnt signaling pathway
hsa04350  TGF-beta signaling pathway
hsa04064  NF-kappa B signaling pathway
Network
nt06505 WNT signaling
nt06507 TGFB signaling
nt06516 TNF signaling
Gene
(STHAG1) MSX1 [HSA:4487] [KO:K09341]
(STHAG3) PAX9 [HSA:5083] [KO:K09382]
(STHAG4) WNT10A [HSA:80326] [KO:K01357]
(STHAG7) LRP6 [HSA:4040] [KO:K03068]
(STHAG8) WNT10B [HSA:7480] [KO:K01357]
(STHAG9) GREM2 [HSA:64388] [KO:K23318]
(STHAG10) TSPEAR [HSA:54084] [KO:K24437]
(STHAGX1) EDA [HSA:1896] [KO:K05480]
(DASS) LTBP3 [HSA:4054] [KO:K08023]
Other DBs
ICD-11: LA30.1
MeSH: D000848
OMIM: 106600 604625 150400 616724 617073 617275 620173 313500 601216
Reference
  Authors
Yu M, Wong SW, Han D, Cai T
  Title
Genetic analysis: Wnt and other pathways in nonsyndromic tooth agenesis.
  Journal
Oral Dis 25:646-651 (2019)
DOI:10.1111/odi.12931
Reference
PMID:8696335 (STHAG1)
  Authors
Vastardis H, Karimbux N, Guthua SW, Seidman JG, Seidman CE
  Title
A human MSX1 homeodomain missense mutation causes selective tooth agenesis.
  Journal
Nat Genet 13:417-21 (1996)
DOI:10.1038/ng0896-417
Reference
PMID:10615120 (STHAG3)
  Authors
Stockton DW, Das P, Goldenberg M, D'Souza RN, Patel PI
  Title
Mutation of PAX9 is associated with oligodontia.
  Journal
Nat Genet 24:18-9 (2000)
DOI:10.1038/71634
Reference
PMID:24449199 (STHAG4)
  Authors
Arzoo PS, Klar J, Bergendal B, Norderyd J, Dahl N
  Title
WNT10A mutations account for (1/4) of population-based isolated oligodontia and show phenotypic correlations.
  Journal
Am J Med Genet A 164A:353-9 (2014)
DOI:10.1002/ajmg.a.36243
Reference
PMID:26387593 (STHAG7)
  Authors
Massink MP, Creton MA, Spanevello F, Fennis WM, Cune MS, Savelberg SM, Nijman IJ, Maurice MM, van den Boogaard MJ, van Haaften G
  Title
Loss-of-Function Mutations in the WNT Co-receptor LRP6 Cause Autosomal-Dominant Oligodontia.
  Journal
Am J Hum Genet 97:621-6 (2015)
DOI:10.1016/j.ajhg.2015.08.014
Reference
PMID:27321946 (STHAG8)
  Authors
Yu P, Yang W, Han D, Wang X, Guo S, Li J, Li F, Zhang X, Wong SW, Bai B, Liu Y, Du J, Sun ZS, Shi S, Feng H, Cai T
  Title
Mutations in WNT10B Are Identified in Individuals with Oligodontia.
  Journal
Am J Hum Genet 99:195-201 (2016)
DOI:10.1016/j.ajhg.2016.05.012
Reference
PMID:26416033 (STHAG9)
  Authors
Kantaputra PN, Kaewgahya M, Hatsadaloi A, Vogel P, Kawasaki K, Ohazama A, Ketudat Cairns JR
  Title
GREMLIN 2 Mutations and Dental Anomalies.
  Journal
J Dent Res 94:1646-52 (2015)
DOI:10.1177/0022034515608168
Reference
PMID:30046887 (STHAG10)
  Authors
Du R, Dinckan N, Song X, Coban-Akdemir Z, Jhangiani SN, Guven Y, Aktoren O, Kayserili H, Petty LE, Muzny DM, Below JE, Boerwinkle E, Wu N, Gibbs RA, Posey JE, Lupski JR, Letra A, Uyguner ZO
  Title
Identification of likely pathogenic and known variants in TSPEAR, LAMB3, BCOR, and WNT10A in four Turkish families with tooth agenesis.
  Journal
Hum Genet 137:689-703 (2018)
DOI:10.1007/s00439-018-1907-y
Reference
PMID:16583127 (STHAGX1)
  Authors
Tao R, Jin B, Guo SZ, Qing W, Feng GY, Brooks DG, Liu L, Xu J, Li T, Yan Y, He L
  Title
A novel missense mutation of the EDA gene in a Mongolian family with congenital hypodontia.
  Journal
J Hum Genet 51:498-502 (2006)
DOI:10.1007/s10038-006-0389-2
Reference
PMID:19344874 (DASS)
  Authors
Noor A, Windpassinger C, Vitcu I, Orlic M, Rafiq MA, Khalid M, Malik MN, Ayub M, Alman B, Vincent JB
  Title
Oligodontia is caused by mutation in LTBP3, the gene encoding latent TGF-beta binding protein 3.
  Journal
Am J Hum Genet 84:519-23 (2009)
DOI:10.1016/j.ajhg.2009.03.007
LinkDB

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KEGG   DISEASE: Familial exudative vitreoretinopathy
Entry
H00589                      Disease                                
Name
Familial exudative vitreoretinopathy
Description
Familial exudative vitreoretinopathy (FEVR) is inherited retinal disorders with ocular manifestations that are caused by alterations in the Wnt signaling network. FEVR has an abnormal vascularization of the peripheral retina with the formation of retinal folds, retinal detachment, and in many cases the creation of a fibrovascular membrane located behind the lens. Mutations in NDP, FZD4, and LRP5 have been reported to be responsible for ophthalmic diseases including Norrie disease, FEVR, and osteoporosis pseudoglioma syndrome. The proteins encoded by these genes have all been shown to participate in the Wnt/Norrin signaling pathway. Recently, heterozygous mutations in TSPAN12, which is a component of the Norrin-FZD4-LRP5 signaling complex, have been found to be responsible for autosomal dominant FEVR.
Category
Nervous system disease
Brite
Human diseases in ICD-11 classification [BR:br08403]
 20 Developmental anomalies
  Structural developmental anomalies primarily affecting one body system
   Structural developmental anomalies of the eye, eyelid or lacrimal apparatus
    LA13  Structural developmental anomalies of the posterior segment of eye
     H00589  Familial exudative vitreoretinopathy
Pathway-based classification of diseases [BR:br08402]
 Signal transduction
  nt06505  WNT signaling
   H00589  Familial exudative vitreoretinopathy
Pathway
hsa04310  Wnt signaling pathway
Network
nt06505 WNT signaling
Gene
(EVR1) FZD4 [HSA:8322] [KO:K02354]
(EVR2) NDP [HSA:4693] [KO:K25688]
(EVR4) LRP5 [HSA:4041] [KO:K03068]
(EVR5) TSPAN12 [HSA:23554] [KO:K17355]
(EVR6) ZNF408 [HSA:79797] [KO:K24372]
(EVR7) CTNNB1 [HSA:1499] [KO:K02105]
(EVR8) LRP6 [HSA:4040] [KO:K03068]
Comment
Exudative vitreoretinopathy 3 (EVR3) results from a deletion at chromosome 11p13-p12.
Other DBs
ICD-11: LA13.3
MeSH: D000080345
OMIM: 133780 305390 601813 613310 616468 617572 621268
Reference
  Authors
Clevers H
  Title
Eyeing up new Wnt pathway players.
  Journal
Cell 139:227-9 (2009)
DOI:10.1016/j.cell.2009.09.027
Reference
PMID:20340138 (EVR1 EVR2 EVR4)
  Authors
Nikopoulos K, Venselaar H, Collin RW, Riveiro-Alvarez R, Boonstra FN, Hooymans JM, Mukhopadhyay A, Shears D, van Bers M, de Wijs IJ, van Essen AJ, Sijmons RH, Tilanus MA, van Nouhuys CE, Ayuso C, Hoefsloot LH, Cremers FP
  Title
Overview of the mutation spectrum in familial exudative vitreoretinopathy and Norrie disease with identification of 21 novel variants in FZD4, LRP5, and NDP.
  Journal
Hum Mutat 31:656-66 (2010)
DOI:10.1002/humu.21250
Reference
PMID:19837033 (EVR5)
  Authors
Junge HJ, Yang S, Burton JB, Paes K, Shu X, French DM, Costa M, Rice DS, Ye W
  Title
TSPAN12 regulates retinal vascular development by promoting Norrin- but not Wnt-induced FZD4/beta-catenin signaling.
  Journal
Cell 139:299-311 (2009)
DOI:10.1016/j.cell.2009.07.048
Reference
PMID:23716654 (EVR6)
  Authors
Collin RW, Nikopoulos K, Dona M, Gilissen C, Hoischen A, Boonstra FN, Poulter JA, Kondo H, Berger W, Toomes C, Tahira T, Mohn LR, Blokland EA, Hetterschijt L, Ali M, Groothuismink JM, Duijkers L, Inglehearn CF, Sollfrank L, Strom TM, Uchio E, van Nouhuys CE, Kremer H, Veltman JA, van Wijk E, Cremers FP
  Title
ZNF408 is mutated in familial exudative vitreoretinopathy and is crucial for the development of zebrafish retinal vasculature.
  Journal
Proc Natl Acad Sci U S A 110:9856-61 (2013)
DOI:10.1073/pnas.1220864110
Reference
PMID:28575650 (EVR7)
  Authors
Panagiotou ES, Sanjurjo Soriano C, Poulter JA, Lord EC, Dzulova D, Kondo H, Hiyoshi A, Chung BH, Chu YW, Lai CHY, Tafoya ME, Karjosukarso D, Collin RWJ, Topping J, Downey LM, Ali M, Inglehearn CF, Toomes C
  Title
Defects in the Cell Signaling Mediator beta-Catenin Cause the Retinal Vascular Condition FEVR.
  Journal
Am J Hum Genet 100:960-968 (2017)
DOI:10.1016/j.ajhg.2017.05.001
Reference
PMID:34896607 (EVR8)
  Authors
Li S, Yang M, He Y, Jiang X, Zhao R, Liu W, Huang L, Shi Y, Li X, Sun K, Yang Y, Sundaresan P, Zhao P, Yang Z, Zhu X
  Title
Variants in the Wnt co-receptor LRP6 are associated with familial exudative vitreoretinopathy.
  Journal
J Genet Genomics 49:590-594 (2022)
DOI:10.1016/j.jgg.2021.11.010
LinkDB

» Japanese version

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