Candidatus Koribacter versatilis: Acid345_4072
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Entry
Acid345_4072 CDS
T00352
Name
(GenBank) RND efflux system, outer membrane lipoprotein, NodT
KO
K18139
outer membrane protein, multidrug efflux system
Organism
aba
Candidatus Koribacter versatilis
Pathway
aba01501
beta-Lactam resistance
aba02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
aba00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Acid345_4072
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Acid345_4072
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
aba02000
]
Acid345_4072
01504 Antimicrobial resistance genes [BR:
aba01504
]
Acid345_4072
Transporters [BR:
aba02000
]
Other transporters
Pores ion channels [TC:
1
]
Acid345_4072
Antimicrobial resistance genes [BR:
aba01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Acid345_4072
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
Acid345_4072
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
Acid345_4072
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Pax2_C
Motif
Other DBs
NCBI-ProteinID:
ABF43072
UniProt:
Q1IJ78
LinkDB
All DBs
Position
4821136..4822530
Genome browser
AA seq
464 aa
AA seq
DB search
MNCKRILLALLLLLMAGCKVGPNYKRPAVTVPDAYRGPTLDGGQANGISLGEQKWWDVFN
DEQLQKLIRQALDANYDVKIAATRVLQAQAALGITRADQFPTIAGGASALNERIPRVKGL
PAYENSALQVNLSLVWQLDFWGKYRRATEAARADLLSTEWGKRAVINSVISNVANGYFQL
LELDREMEIAKGTLASRQESLRLVNIRQKGGTTSLLDVRQSEQLLYTAAAAIPDLERRIE
QEENFISILLGQNPGPIQRGKPLVEFAILPSVPPGLPSTLLERRPDLQSAEQQLVAANAR
IGVAKADYFPQISLTALGGYQSSALTGLFSGPAGLWSFGGQLAQPIFTGGKIRSNVRLTE
AQQQEAVFRYQQSIQQAFREVSDSLVAYRKNQEFREQEANLAASAVDATRLARIRYEGGV
SSYLEVLDNDTRSFDAEISLAQAQLGERVALVQLYNALGGGWQQ
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgaattgcaaacgaattctccttgcgctcctgttgctcctgatggccggctgcaaagtc
ggaccgaactacaaacgccccgccgtgacggttccggatgcttaccgggggccgaccttg
gacggcggacaagccaacggcatctccctgggcgagcagaagtggtgggatgtcttcaac
gatgagcaactgcaaaagctgatccgacaagctctcgatgctaactatgatgtaaagatc
gccgcgactcgcgtgctccaggcacaggccgcgcttgggatcacacgcgccgatcagttc
cccacgattgctgggggcgcatcggcccttaacgagcgtatcccgcgggtgaaaggcttg
ccggcttacgaaaacagcgcgctccaggtaaacctctccctcgtctggcagctcgacttc
tggggtaaatatcgtcgcgccacagaagcagcgcgtgcagacttgctctccaccgagtgg
ggcaagcgcgccgtcatcaacagcgtcatcagcaacgtcgccaacgggtacttccagttg
cttgagctcgatcgcgagatggagatcgccaagggcacattagcatcgcgccaagaatcg
ttgcgcttggtgaacatccgtcaaaagggcggaacgacttccctgctcgacgtacgtcag
tcggaacaacttctctacacggccgccgctgccattcccgacctcgaacgccggatcgag
caagaggagaacttcatcagcatcctcctcggccagaatcccggtccgattcaacggggc
aagccgctcgtcgaattcgcgattcttccttcggttccgcccggattgccctcgactttg
cttgagcggcgcccggacttgcagtcggcggagcagcaactggtcgcagcgaatgcgcgt
attggtgtcgcgaaagctgactactttccacagatctctcttaccgccctcggtggatac
cagagctcggcgctaacggggctcttttccggccctgccggtttgtggagcttcggcggt
caactggcccaaccgatcttcaccggcggcaaaattagatcgaacgtgagattaacggaa
gctcagcaacaagaagcggtgttccgctatcaacagtccattcagcaagcgttccgtgaa
gtctcggattcgctggtggcctatcgcaagaaccaggagttccgcgaacaggaagcaaac
ttggcggcttctgccgtggatgctacccgcctcgcgcgcattcgctacgaaggcggtgta
tccagctatctcgaggttctcgataacgacactcgctcgttcgacgctgagatctcgctt
gcccaggcacaactcggcgaacgcgtcgcattggtccagctctacaacgcactcggcggc
ggctggcagcagtaa
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