KEGG   PATHWAY: achc03050
Entry
achc03050                   Pathway                                
Name
Proteasome - Aquila chrysaetos chrysaetos (golden eagle)
Description
The proteasome is a protein-destroying apparatus involved in many essential cellular functions, such as regulation of cell cycle, cell differentiation, signal transduction pathways, antigen processing for appropriate immune responses, stress signaling, inflammatory responses, and apoptosis. It is capable of degrading a variety of cellular proteins in a rapid and timely fashion and most substrate proteins are modified by ubiquitin before their degradation by the proteasome. The proteasome is a large protein complex consisting of a proteolytic core called the 20S particle and ancillary factors that regulate its activity in various ways. The most common form is the 26S proteasome containing one 20S core particle and two 19S regulatory particles that enable the proteasome to degrade ubiquitinated proteins by an ATP-dependent mechanism. Another form is the immunoproteasome containing two 11S regulatory particles, PA28 alpha and PA28 beta, which are induced by interferon gamma under the conditions of intensified immune response. Other regulatory particles include PA28 gamma and PA200. Although PA28 gamma also belongs to a family of activators of the 20S proteasome, it is localized within the nucleus and forms a homoheptamer. PA28 gamma has been implicated in the regulation of cell cycle progression and apoptosis. PA200 has been identified as a large nuclear protein that stimulates proteasomal hydrolysis of peptides.
Class
Genetic Information Processing; Folding, sorting and degradation
Pathway map
achc03050  Proteasome
achc03050

Other DBs
GO: 0000502
Organism
Aquila chrysaetos chrysaetos (golden eagle) [GN:achc]
Gene
115334869  PSMB7; proteasome subunit beta type-7 [KO:K02739] [EC:3.4.25.1]
115335328  PSMA5; proteasome subunit alpha type-5 [KO:K02729] [EC:3.4.25.1]
115336262  IFNG; interferon gamma [KO:K04687]
115338407  PSMB6; proteasome subunit beta type-6 [KO:K02738] [EC:3.4.25.1]
115338774  ADRM1; proteasomal ubiquitin receptor ADRM1 isoform X1 [KO:K06691]
115339173  PSMF1; proteasome inhibitor PI31 subunit [KO:K06700]
115339458  PSMA7; proteasome subunit alpha type-7 [KO:K02731] [EC:3.4.25.1]
115339638  PSMA2; proteasome subunit alpha type-2 [KO:K02726] [EC:3.4.25.1]
115339678  SEM1; 26S proteasome complex subunit SEM1 [KO:K10881]
115341440  PSMD12; 26S proteasome non-ATPase regulatory subunit 12 [KO:K03035]
115341795  PSMC2; 26S proteasome regulatory subunit 7 [KO:K03061]
115341950  PSMA4; proteasome subunit alpha type-4 isoform X1 [KO:K02728] [EC:3.4.25.1]
115342837  PSMD14; 26S proteasome non-ATPase regulatory subunit 14 [KO:K03030]
115344210  PSMD11; 26S proteasome non-ATPase regulatory subunit 11 [KO:K03036]
115344296  PSME3; proteasome activator complex subunit 3 [KO:K06698]
115344585  PSME4; proteasome activator complex subunit 4 isoform X1 [KO:K06699]
115344867  PSMB3; proteasome subunit beta type-3 [KO:K02735] [EC:3.4.25.1]
115344943  PSMD3; LOW QUALITY PROTEIN: 26S proteasome non-ATPase regulatory subunit 3 [KO:K03033]
115345081  PSMC5; 26S proteasome regulatory subunit 8 isoform X2 [KO:K03066]
115345554  PSMD4; 26S proteasome non-ATPase regulatory subunit 4 isoform X1 [KO:K03029]
115345561  PSMB4; proteasome subunit beta type-4 [KO:K02736] [EC:3.4.25.1]
115345932  PSMD7; 26S proteasome non-ATPase regulatory subunit 7 [KO:K03038]
115346248  PSMD9; 26S proteasome non-ATPase regulatory subunit 9 [KO:K06693]
115347130  PSMD1; 26S proteasome non-ATPase regulatory subunit 1 isoform X1 [KO:K03032]
115347473  PSMD2; 26S proteasome non-ATPase regulatory subunit 2 isoform X1 [KO:K03028]
115348401  PSMC6; 26S proteasome regulatory subunit 10B [KO:K03064]
115350016  PSMC3; 26S proteasome regulatory subunit 6A [KO:K03065]
115350408  PSMB1; proteasome subunit beta type-1 [KO:K02732] [EC:3.4.25.1]
115350472  PSMA3; proteasome subunit alpha type-3 [KO:K02727] [EC:3.4.25.1]
115351553  PSMA1; proteasome subunit alpha type-1 [KO:K02725] [EC:3.4.25.1]
115351716  PSMC1; 26S proteasome regulatory subunit 4 [KO:K03062]
115351727  PSMB2; proteasome subunit beta type-2 [KO:K02734] [EC:3.4.25.1]
115351891  PSMD13; 26S proteasome non-ATPase regulatory subunit 13 isoform X1 [KO:K03039]
115353190  [KO:K11599]
115353791  PSMD6; 26S proteasome non-ATPase regulatory subunit 6 [KO:K03037]
115353837  PSMA6; proteasome subunit alpha type-6 isoform X1 [KO:K02730] [EC:3.4.25.1]
Reference
  Authors
Hirano Y, Murata S, Tanaka K
  Title
Large- and small-scale purification of mammalian 26S proteasomes.
  Journal
Methods Enzymol 399:227-40 (2005)
DOI:10.1016/S0076-6879(05)99015-0
Reference
  Authors
Saeki Y, Tanaka K
  Title
Cell biology: two hands for degradation.
  Journal
Nature 453:460-1 (2008)
DOI:10.1038/453460a
Reference
  Authors
Smith DM, Benaroudj N, Goldberg A
  Title
Proteasomes and their associated ATPases: a destructive combination.
  Journal
J Struct Biol 156:72-83 (2006)
DOI:10.1016/j.jsb.2006.04.012
Reference
  Authors
Strehl B, Seifert U, Kruger E, Heink S, Kuckelkorn U, Kloetzel PM
  Title
Interferon-gamma, the functional plasticity of the ubiquitin-proteasome system, and MHC class I antigen processing.
  Journal
Immunol Rev 207:19-30 (2005)
DOI:10.1111/j.0105-2896.2005.00308.x
Reference
  Authors
Darwin KH
  Title
Prokaryotic ubiquitin-like protein (Pup), proteasomes and pathogenesis.
  Journal
Nat Rev Microbiol 7:485-91 (2009)
DOI:10.1038/nrmicro2148
Reference
  Authors
Tomko RJ Jr, Hochstrasser M
  Title
Molecular architecture and assembly of the eukaryotic proteasome.
  Journal
Annu Rev Biochem 82:415-45 (2013)
DOI:10.1146/annurev-biochem-060410-150257
Reference
  Authors
Budenholzer L, Cheng CL, Li Y, Hochstrasser M
  Title
Proteasome Structure and Assembly.
  Journal
J Mol Biol 429:3500-3524 (2017)
DOI:10.1016/j.jmb.2017.05.027
Reference
  Authors
Cloos J, Roeten MS, Franke NE, van Meerloo J, Zweegman S, Kaspers GJ, Jansen G
  Title
(Immuno)proteasomes as therapeutic target in acute leukemia.
  Journal
Cancer Metastasis Rev 36:599-615 (2017)
DOI:10.1007/s10555-017-9699-4
Reference
  Authors
Sakata E, Bohn S, Mihalache O, Kiss P, Beck F, Nagy I, Nickell S, Tanaka K, Saeki Y, Forster F, Baumeister W
  Title
Localization of the proteasomal ubiquitin receptors Rpn10 and Rpn13 by electron cryomicroscopy.
  Journal
Proc Natl Acad Sci U S A 109:1479-84 (2012)
DOI:10.1073/pnas.1119394109
Related
pathway
achc04120  Ubiquitin mediated proteolysis
KO pathway
ko03050   

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