Acidithiobacillus caldus SM-1: Atc_1750
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Entry
Atc_1750 CDS
T01581
Name
(GenBank) Outer membrane protein, RND efflux system precursor
KO
K12340
outer membrane protein
Organism
acu
Acidithiobacillus caldus SM-1
Pathway
acu01501
beta-Lactam resistance
acu01503
Cationic antimicrobial peptide (CAMP) resistance
acu02020
Two-component system
acu03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
acu00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
Atc_1750
09132 Signal transduction
02020 Two-component system
Atc_1750
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Atc_1750
01503 Cationic antimicrobial peptide (CAMP) resistance
Atc_1750
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
acu02000
]
Atc_1750
02044 Secretion system [BR:
acu02044
]
Atc_1750
01504 Antimicrobial resistance genes [BR:
acu01504
]
Atc_1750
Transporters [BR:
acu02000
]
Other transporters
Pores ion channels [TC:
1
]
Atc_1750
Secretion system [BR:
acu02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
Atc_1750
RTX toxin transporter
Atc_1750
Multiple protein transporter
Atc_1750
RaxAB-RaxC type I secretion system protein
Atc_1750
Antimicrobial resistance genes [BR:
acu01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
Atc_1750
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
Atc_1750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
AEK58398
UniProt:
F9ZT24
LinkDB
All DBs
Position
complement(1806610..1808091)
Genome browser
AA seq
493 aa
AA seq
DB search
MAHQVGKPGFLARVYMSGSLRGARRIFIVLLAAVLSPAAQALDFADCVKAALQQNPAMLE
AHAESAEAKGAVSAARGHLLPKLTASFSASQSNNALTVFGMKLSQRRATFNSFGANQFDP
NLGAAGLDIAPGNLDHPSGYHNFGTKLQLDIPIWNGGAIRGGIDQATAMLRAAQNGDRAA
QQKLIFALLQAYDGVVAAQSAIEVAEKAQQAAAAYVKTSRQLLARGVIVKSDLLSAEVHQ
EEAQLALRHARDQKANALENLAVLIGRAQTEGLEVGAPVMPAFPEGTLEQLQAEALADNA
GIQALREQLKAARARAGVTVARAAYLPHVNAMANQEWNGTGIGNGAPSYTVGGEVSWAAL
DFSRGGQVDSARAKVQLQLAKLQQAEDHLRVQLGQAWRAAHEASARVKSRELAVRQAEEA
QRLLRLRYENGVETLTGLLRGQAELDRIRAELVQARYDEAVERAALWLALGKLELAHIVA
VTGASVPQEGATG
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggctcatcaggtcgggaaacccggttttctggcgagggtatacatgtccggttcattg
cgcggcgcacgccgtatcttcatcgtcttgctggcggcagtgctgagtcctgcggcgcag
gccctggattttgccgattgcgtcaaggcggcattgcagcagaatccggcaatgctcgag
gcgcacgctgagagcgccgaggccaagggcgcggtctcggcggcgcgggggcacctgttg
ccgaagctcacggcatctttttccgcctcccagtccaacaacgccctgaccgtcttcggt
atgaagctgtcgcagcggcgcgccaccttcaactcctttggtgccaaccagtttgacccc
aatctgggcgccgccggtctcgacatagccccgggcaatctcgatcatcccagtggttac
cacaactttggcaccaagctgcagctggatattcccatctggaatggcggcgccatccgt
ggcggcatcgatcaggccacagcgatgctgcgcgccgcgcagaacggcgaccgggcggcg
cagcagaagctcatctttgcgctcttgcaggcctacgacggcgtggtggcggctcaatct
gccatcgaggtggcagaaaaagcgcagcaggcggccgcggcctacgtcaagacctcccgg
cagctactggcccggggcgtcatcgtcaaaagcgatctgctgagtgccgaggtgcatcag
gaggaggcgcaactggcgcttcgccatgctcgggatcaaaaagcaaacgccctcgagaat
ctggcggtgctcatcgggcgcgcccaaaccgaagggctggaagtgggagcgccggtgatg
cccgcctttcccgaggggaccctcgagcagttgcaggccgaagccctggcagacaatgcc
gggattcaggccctgcgtgagcagctcaaggccgcgcgggcgcgggcgggggtgacggtg
gcgcgtgctgcctacctgccccacgtcaatgccatggccaaccaggagtggaacggcacg
ggcatcggcaatggcgcgccctcctataccgtgggtggcgaggtgagctgggcggctctg
gatttttcgcggggcggtcaggtggacagcgcccgggccaaggtgcagctgcagctggcc
aaattgcagcaggccgaggaccacttgcgggtacaactgggtcaggcctggcgtgccgcc
cacgaggcatcggcgcgcgtgaagagtcgggagctcgccgtacggcaggcggaagaagcg
cagcgcctcctgcgtctacgctacgaaaacggcgtcgaaaccctgacgggcctcttgcgc
ggccaggcagagctggatcgcattcgggcagagctggtgcaggcacgttacgacgaagcg
gtggagcgtgcagccctatggctcgccctcgggaagcttgagctagcgcatatagtggcg
gtgacgggagcgtccgtgccgcaggaaggagcaacgggatga
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