Acidithiobacillus caldus SM-1: Atc_1946
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Entry
Atc_1946 CDS
T01581
Name
(GenBank) Outer membrane component of tripartite multidrug resistance system
KO
K18139
outer membrane protein, multidrug efflux system
Organism
acu
Acidithiobacillus caldus SM-1
Pathway
acu01501
beta-Lactam resistance
acu02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
acu00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Atc_1946
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Atc_1946
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
acu02000
]
Atc_1946
01504 Antimicrobial resistance genes [BR:
acu01504
]
Atc_1946
Transporters [BR:
acu02000
]
Other transporters
Pores ion channels [TC:
1
]
Atc_1946
Antimicrobial resistance genes [BR:
acu01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Atc_1946
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
Atc_1946
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
Atc_1946
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Med3
Beta-sol_PIC_HAP1_IgA0_2nd
Motif
Other DBs
NCBI-ProteinID:
AEK58594
UniProt:
F9ZQ35
LinkDB
All DBs
Position
complement(1989809..1991191)
Genome browser
AA seq
460 aa
AA seq
DB search
MVGGCARLPEQLPNNPKDQVDLDIPRPTGIAAAPWPAQEWWRSANDPELNRLVQIAFARN
PDLRAAAAKVLLAQADVGAARSRLLPHFDADFALTQQYFSAQGLHLSANGTSNTFGALNP
IDIHYHVDLWGQDRDLVRAARGRLAMNQAEAAQARLLVSTAVVVQYFALEGDRRLLQQTE
HLHTLQEQAKAVAEGGFQQGLFNASQIHAEDLALAESAQRIAKLQAAIAAEKHALAALCG
EGPSMTIGSATITKQALSPALGLPKNLPLRLLARRPDIVAARWAVQAAAAEVGAARAAFY
PNINLRLLAGWNSIHLGDLFNPGNFAHAVGPVITLPIFEGGALRAHLRAQNAVFLAAQDR
YRSTLLAALRQIADRLSTAQKLARQERAQRHAAAAAQAQWELRQQAWRQGLSDALPSIAA
EITCVQVRQRQTAITTARWQNWALLESALGGGYRHTIKDG
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
gtggtgggcggctgcgcgcgcctacctgagcagctacccaacaatccgaaagatcaggtg
gatttagacattcccagacccaccgggatagccgcggcaccctggcccgcccaagagtgg
tggcggagtgcgaacgatccggaacttaaccgtctggtacagatcgctttcgcgcggaat
ccggatctacgagccgcagcggcaaaggtactgctggcacaagccgatgtcggcgctgcg
cgatcacggctcttgccccatttcgatgccgattttgcactcacgcagcaatatttttcc
gcccaaggtctgcatctcagcgccaatggcacgagcaatacttttggcgcactgaatccc
atcgacatccactatcatgtcgatctttgggggcaggatcgcgatctggtgcgggcagct
cgcggtcgcttggccatgaaccaggcggaggcagcccaggcacggctattggtcagtacg
gcggtcgtcgtccagtatttcgctctcgaaggtgaccgacgcttgctccagcagacagaa
catctgcataccctgcaagagcaggccaaggccgtggcagagggtggttttcaacaaggt
ttgttcaatgccagccagatccatgccgaagatctagccctagccgagtccgcccagcgc
atcgccaagctgcaagcggccattgctgccgagaagcatgccctggccgcactctgcggc
gaagggccttccatgacgatagggtccgctaccatcacgaagcaggcgctctccccagca
ctggggttgccgaagaatctcccattgcgattgcttgctcggcgccccgacatcgtcgcc
gcccgctgggccgtgcaagcggcagcggcagaggttggggcggcacgggctgccttctac
ccaaacatcaatctccgtctgctcgccggttggaacagtatccacctgggcgatctattt
aatccggggaatttcgcccatgccgtcggtccggtcattaccttgccgattttcgaggga
ggagccctacgtgcccacctgcgggcgcagaatgcggtctttcttgctgcccaggatcgc
tatcggagcaccctcttggcagcgttacgccaaattgccgatcgcctgagcacggcgcag
aagctagcacgccaagaacgggcccagcgccacgccgcggcagcggcgcaggcacagtgg
gagttgcgccagcaagcctggcgccagggcctgagtgatgctctgcccagcatcgcggca
gaaatcacctgcgttcaggttcgccaacggcaaacggctattaccaccgcacgttggcaa
aactgggcgctactggagtccgctttgggcggaggatatcgacatacgataaaggatggc
tga
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