Anser cygnoides (swan goose): 106034204
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Entry
106034204 CDS
T04896
Name
(RefSeq) interstitial collagenase-like
KO
K01388
matrix metalloproteinase-1 (interstitial collagenase) [EC:
3.4.24.7
]
Organism
acyg
Anser cygnoides (swan goose)
Pathway
acyg03320
PPAR signaling pathway
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
106034204
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
acyg01002
]
106034204
Enzymes [BR:
acyg01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.7 interstitial collagenase
106034204
Peptidases and inhibitors [BR:
acyg01002
]
Metallo peptidases
Family M10
106034204
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Reprolysin_3
Reprolysin_5
Astacin
Reprolysin_4
Peptidase_M54
DUF4953
Peptidase_M66
Reprolysin_2
DUF6196
Motif
Other DBs
NCBI-GeneID:
106034204
NCBI-ProteinID:
XP_013033641
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Position
1:197348514..197355484
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AA seq
466 aa
AA seq
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MKFLSLLLLLSVAVSSAFPVGPEAEDEGQTLNLVETYLQNFYNLQIDHHPHVRQRSKNHL
VEKLKEMQEFFGLQVTGKPDLETLEMMNKPRCGVPDVQQYMFTPGNPKWKRNNLTYRIVN
YTRKMRQTDVDEAIEKALNVWSSVTPLTFQKTEDKDADIVISFAYRDHQDNSPFDGPNGQ
LAHAFQPGEGIGGDVHLDEEEAWSKDARGYNLFIVVAHELGHSLGLSHSNDPGALMYPTY
AYTDPNEFILPQDDIDGIQAIYGQINAAVQPTGPKTPQACDPNLTFDAITTLRGELMFFK
GRYMLRKHPERAETELNFISLFWPKLPSGIQAAYENIEKDEVLLFKEDKYWVIRGYDIPH
GYPKPIYRLGFPKTVKRVNAAYSDETTGKTYFFVADRYWRYDENKKSMDQGYPRKIVHDF
GKIGRVDAAFQTDGYVYFFHGTTQFQFDPRSKRIVSQRKSISWFNC
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcctttcgcttctcctgttgctgtctgtggctgtctcctctgctttccctgtg
ggtccagaagcagaagatgaaggacaaaccttaaatcttgtggagacgtatctacagaat
ttctacaatcttcaaatagatcaccatcctcatgtaagacagaggagtaaaaatcacctt
gttgaaaagctcaaggaaatgcaagaattctttggactacaggtgactggaaaacctgat
cttgaaactttggagatgatgaataaacccagatgtggtgttcctgatgttcagcaatat
atgttcacaccagggaatccaaaatggaagagaaataatctgacatacaggattgtgaat
tacaccagaaagatgagacaaaccgatgtagatgaagcaatcgaaaaagctctgaatgtc
tggagcagcgtgacaccattgacattccaaaagactgaggacaaagatgcagatatagtg
atctctttcgcttatagagatcaccaggacaactctccttttgatggccccaatgggcag
ctggctcatgcttttcaaccaggtgaaggtattggtggagatgtgcatcttgatgaggag
gaagcctggtcaaaagatgcaagaggatacaacttgttcattgttgttgcccatgagctt
ggccattcactgggtctgtcccattcaaatgatcctggagcactgatgtatccaacttat
gcctacacggaccccaatgaattcattcttcctcaggatgacattgatggcattcaagct
atatatggacagattaatgctgcagtgcagcctacagggcccaaaactccacaagcctgt
gaccccaatttgacatttgatgctattactaccttgcgtggagaattaatgttcttcaag
ggcagatatatgctgcgcaaacatcctgagagggcagagacagagctcaattttatctca
ctgttctggccaaaattgccatcaggaattcaagctgcctatgagaatattgaaaaggat
gaagttttactttttaaagaggacaaatattgggttatcagaggatatgacattccacat
ggttatcctaaaccaatctatcgcttggggttcccgaagactgttaaaagagttaatgca
gcttacagtgacgagaccacaggaaaaacatatttctttgtcgctgacagatactggaga
tatgatgaaaacaaaaaatccatggatcaaggttatcccaggaaaatagtccatgacttt
ggaaaaataggcagagttgatgctgctttccagactgatggctatgtctacttcttccat
ggaacaactcagttccagtttgatcctcggtccaaacggattgtcagtcaaaggaagagc
atcagctggtttaattgctaa
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