Atlantibacter hermannii: NCTC12129_03684
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Entry
NCTC12129_03684 CDS
T05790
Symbol
fdhF_4
Name
(GenBank) formate dehydrogenase H alph subunit (formate-hydrogen-lyase-linked selenocysteine-containing polypeptide)
KO
K22015
formate dehydrogenase (hydrogenase) / hydrogen-dependent carbon dioxide reductase [EC:
1.17.98.4
1.17.98.5
]
Organism
ahn
Atlantibacter hermannii
Pathway
ahn00680
Methane metabolism
ahn00720
Other carbon fixation pathways
ahn01100
Metabolic pathways
ahn01120
Microbial metabolism in diverse environments
ahn01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
ahn00001
]
09100 Metabolism
09102 Energy metabolism
00720 Other carbon fixation pathways
NCTC12129_03684 (fdhF_4)
00680 Methane metabolism
NCTC12129_03684 (fdhF_4)
Enzymes [BR:
ahn01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.98 With other, known, physiological acceptors
1.17.98.4 formate dehydrogenase (hydrogenase)
NCTC12129_03684 (fdhF_4)
1.17.98.5 hydrogen-dependent carbon dioxide reductase
NCTC12129_03684 (fdhF_4)
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GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
Motif
Other DBs
NCBI-ProteinID:
VDZ74528
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All DBs
Position
1:complement(3318409..3320577)
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AA seq
722 aa
AA seq
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MEKIISVCPYCGAGCKLNLCVENGKIVRAEAANGVTNQNELCLKGYYGWDFLNDTRLLTP
RLQEPMIRRQKGGPFEVVSWDEAIRFTASRLQEIKAKYGPKSIMLTGSSRGTGNETNYVM
QKFARGVIGNNNIDCCARVCHGPSVAGLRQTLGNGAMSNSISDIENSQCLLVFGYNCADS
HPIVARRVVKAKEKGAKIIVCDPRKIETARIADQHLQMKNGSNMALVNAFAHVLIEEDLY
DKAYVANFTEGFEAYRSIVADYSPEAVEELVGVPAQEIRQAMRTYAAAPSATIMWGMGVT
QFGQAVDVVKGLSGLALLTGNLGRPNVGVGPVRGQNNVQGACDMGALPDLFPGYQSVSDP
AVREKFAKAWRIDPNTLDPEPGYRITEVPHLAMEGKVKAYYIMGEDPLQTEADLGLVRRG
FEALDFVVVQDIFMTQTAEQADVILPATSWGEHGGVFSCADRGFQRFEKAVEAKGNVKRD
WEIISLISTAMGYPMKYDNNEAIWNELRELCPLYYGVTWEKMAGLGHVQWPCPTLDHPGT
PYLYQDNKFATPSGKGQLFATAWRAPAEIPDESYPLVLCTVREVGHYSCRSMTGNCRALV
TLADEPGFVQMHPDDARKLGVANQALVWVMSRRGKVISRCNYNERVNRGAVYMTYQWWIG
ACNELTQDNLDPTSKTPETKYCAARVEAIEDQKWAENFASQSYNDMKARLRQHVDGAVRA
LA
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaatcatttctgtgtgcccgtactgcggtgctgggtgcaaacttaatttgtgt
gtggaaaacggcaaaattgtccgcgctgaagcggccaatggggtcaccaaccagaacgaa
ctctgcctgaaaggctactacggttgggattttctcaacgacacccgcctgctgacgcca
cgccttcaggaaccgatgattcgccgccagaagggaggccccttcgaagtggtttcctgg
gatgaggcgatccgctttaccgcgtcccgtttgcaggagattaaggcaaaatacggcccg
aaatcgatcatgcttaccggatcgtcacgcggcaccggaaatgaaaccaactacgtgatg
cagaaattcgcgcgcggagtaatcggtaataacaatatcgactgctgcgccagggtatgt
catggcccgtccgtggcgggtctgcgccagacgctgggcaacggcgcgatgagcaactcg
atttccgatatcgaaaactcacaatgtctgctggtgttcggttacaactgcgccgattcg
caccccatcgtggcgcggcgggtagtaaaagccaaagagaaaggcgcaaaaatcatcgtt
tgcgatccgcgtaaaatcgaaacggcgcgcattgccgatcagcatctgcaaatgaaaaac
ggcagcaacatggcgctggttaacgccttcgcccatgtgctgattgaagaagatctctac
gataaagcctacgtcgcaaacttcactgaagggtttgaagcctaccgcagcattgtggcg
gactatagcccggaagcagtggaagaactggtcggcgttccggctcaggaaatccgtcag
gcgatgcgtacttacgccgccgcgccgtctgccaccattatgtggggcatgggcgttacc
cagtttggtcaggcggtggatgtagtgaaagggctgtcgggccttgcgctgttaaccggt
aatctggggcggccaaacgtgggcgtcggaccggtgagggggcaaaacaacgtgcagggc
gcgtgcgatatgggcgcgttaccggatctgttccctggttatcagtcagtcagcgatccg
gcagtacgggagaaattcgctaaagcctggcgcatcgatccgaacaccctcgatccggag
ccgggctaccgcatcactgaagtgccacacctggcgatggaaggcaaagtcaaagcctat
tacatcatgggcgaagatccgctccagaccgaagccgatttagggctggttcgtcgggga
tttgaagcactggattttgtggtggtacaggacatcttcatgacccagaccgccgaacag
gcggatgtgatcctgcccgccaccagctggggcgaacacggcggggtattctcctgcgcg
gatcgcggattccagcggtttgaaaaagcggtggaagcgaaagggaatgtcaaacgcgac
tgggagatcatcagcctgatttccaccgcgatgggctacccgatgaaatacgacaataac
gaagccatctggaacgagctgcgtgaactgtgcccgctctattatggcgtgacctgggaa
aaaatggccgggctgggccacgtccagtggccatgtccgacgctggaccaccccggtacg
ccctatctgtatcaggataacaagttcgccaccccgagcggcaaagggcaactgttcgcc
accgcctggcgtgcgccagcggaaatcccggacgagagctatccgctggtgctgtgcacc
gtgcgtgaagtcgggcattacagctgccgctcaatgaccggcaactgccgcgcactggta
acgctggccgatgaaccgggctttgtgcagatgcatcctgacgatgcccgtaaactcggc
gtcgctaatcaggcgctggtgtgggtgatgtcgcgacgtggcaaagtcatctcacgctgc
aattataatgagcgcgttaaccgcggcgcggtgtacatgacctatcagtggtggattgga
gcctgtaatgaattaacgcaggataatcttgaccctacctccaaaacgccggaaacgaaa
tactgtgcggcgcgggttgaagccattgaggatcagaaatgggcggagaatttcgccagt
cagtcctacaacgacatgaaagcccgtctgcgtcagcacgttgacggcgcggttcgtgcg
ctggcctga
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