Alteromonas naphthalenivorans: ambt_20900
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Entry
ambt_20900 CDS
T01513
Name
(GenBank) RND efflux system, outer membrane lipoprotein, NodT family
KO
K18139
outer membrane protein, multidrug efflux system
Organism
alt
Alteromonas naphthalenivorans
Pathway
alt01501
beta-Lactam resistance
alt02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
alt00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ambt_20900
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
ambt_20900
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
alt02000
]
ambt_20900
01504 Antimicrobial resistance genes [BR:
alt01504
]
ambt_20900
Transporters [BR:
alt02000
]
Other transporters
Pores ion channels [TC:
1
]
ambt_20900
Antimicrobial resistance genes [BR:
alt01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
ambt_20900
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
ambt_20900
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
ambt_20900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
AEF05671
UniProt:
F5Z708
LinkDB
All DBs
Position
complement(4690619..4692046)
Genome browser
AA seq
475 aa
AA seq
DB search
MSLAKKRNVAVTKMLKRSMNGFLFAGVTIVPICFIIGCSTNGSHQPATTDINIPKDFKSS
AAPRQAIQSDWLKTFNDPYLDKLISEVLTNNFDLQIAAAKVDSAAAAARQAGASLTPAVN
LGLQTTDRGRVEGSLSDSESNVGASLDISWELDVWGRIRAGRDAATEELQASTLDYEYAK
LSLAAQTAKAYFLAVETGRQVSLAEDTVANFDKTVEIASAFFDEGMVGIQDVHLAKSQKA
SAEASLENLRVAYSDTLRSLEALLGRYPSAEVEIADALPALPVPVPAGVPSEVLERRPDI
VAAERRVAAAFKKTQQAKAAKLPKLALTSSVGGTGGSLSDAVNPNNMIWNVVTNLMFPIF
DGGSLDAQLEAATANQKQALANYQKTALSAFVDIESALSNETSLRKQIINLRSAYEEAER
AEKIGWETYQSGEGNLLDVQQLQRSTISALSTLLNTEHELFVQRINLYLGLGGEI
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgtcattagctaaaaagcgtaacgttgctgtaacaaagatgcttaaaagatcaatgaat
ggctttctttttgccggtgtaactattgtacccatttgctttattatcggttgttcaaca
aatggttcacatcaaccagccaccactgacattaatattcctaaagattttaagagtagt
gccgctcctagacaagctattcagtcagattggctaaaaaccttcaatgatccttacctc
gataagctgatatcagaagtccttacgaataattttgatttgcagattgcagccgccaag
gttgactcagccgctgcagcggctagacaagcgggagcctcgctcactccagcagttaat
ttaggccttcaaaccacggatcgaggtagggtcgaaggaagcttgagtgatagcgaatca
aatgttggggcttccctggatatatcctgggagctggatgtttggggcaggattagagca
ggacgcgatgcggccaccgaagagctgcaagcctctacacttgattacgagtacgccaag
ctttctttggctgctcaaacagctaaagcctattttctcgctgtagaaactggacggcag
gtcagcttggcagaggacactgtcgcgaattttgataaaacagtcgaaatcgcctcagca
tttttcgatgaggggatggtgggcattcaggatgtgcatctggctaaatcacagaaagcc
agtgccgaggcttcccttgagaatttacgggtggcctattcggatactttaagaagctta
gaggccctattgggacgttacccctcagcagaagtcgaaatcgccgatgccttgccagcg
ctgcctgtgcctgtgccagcaggtgtgccctcagaagtgctcgaacgccgcccagatata
gtcgccgcagaaagacgtgttgcagcggctttcaagaaaactcaacaagctaaagcggca
aaacttccaaaattagctttaaccagcagtgtgggcggcactggggggagcctatcagat
gctgttaaccctaataatatgatttggaatgttgtaaccaacctgatgtttcccattttt
gacggtggcagtctcgatgcacagttagaagcggcaacggctaatcaaaagcaggcttta
gcaaattatcaaaagactgccctcagtgcctttgtagatattgaatcggcgctcagtaat
gaaacaagtttgcgcaaacaaattattaatctacgttctgcttatgaagaagcagagcgg
gcagagaaaattggctgggagacttaccaaagtggcgagggtaacttgcttgatgttcag
caattgcaacgttcgacgatttcagcgctgagtacactgttgaatacagaacatgaactt
tttgtacaacgaatcaatttatatcttggtttgggcggtgaaatataa
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