KEGG   PATHWAY: aly00190
Entry
aly00190                    Pathway                                
Name
Oxidative phosphorylation - Arabidopsis lyrata (lyrate rockcress)
Class
Metabolism; Energy metabolism
Pathway map
aly00190  Oxidative phosphorylation
aly00190

Module
aly_M00145  NAD(P)H:quinone oxidoreductase, chloroplasts and cyanobacteria [PATH:aly00190]
aly_M00148  Succinate dehydrogenase (ubiquinone) [PATH:aly00190]
aly_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:aly00190]
Organism
Arabidopsis lyrata (lyrate rockcress) [GN:aly]
Gene
32283073  ndhA; NADH dehydrogenase subunit 1 [KO:K05572] [EC:7.1.1.2]
9324455  uncharacterized protein LOC9324455 [KO:K05573] [EC:7.1.1.2]
32283156  ndhB; NADH dehydrogenase subunit 2 [KO:K05573] [EC:7.1.1.2]
32283135  ndhB; NADH dehydrogenase subunit 2 [KO:K05573] [EC:7.1.1.2]
9299384  uncharacterized protein LOC9299384 [KO:K05573] [EC:7.1.1.2]
32283075  ndhC; NADH dehydrogenase subunit 3 [KO:K05574] [EC:7.1.1.2]
32283054  ndhD; NADH dehydrogenase subunit 4 [KO:K05575] [EC:7.1.1.2]
110227186  uncharacterized protein LOC110227186 [KO:K05575] [EC:7.1.1.2]
32283084  ndhE; NADH dehydrogenase subunit 4L [KO:K05576] [EC:7.1.1.2]
32283175  ndhF; NADH dehydrogenase subunit 5 [KO:K05577] [EC:7.1.1.2]
32283067  ndhG; NADH dehydrogenase subunit 6 [KO:K05578] [EC:7.1.1.2]
32283060  ndhH; NADH dehydrogenase subunit 7 [KO:K05579] [EC:7.1.1.2]
32283070  ndhI; NADH dehydrogenase subunit I [KO:K05580] [EC:7.1.1.2]
32283143  ndhJ; NADH dehydrogenase subunit J [KO:K05581] [EC:7.1.1.2]
32283074  ndhK; NADH dehydrogenase 27 kDa subunit [KO:K05582] [EC:7.1.1.2]
9304596  NADH dehydrogenase [ubiquinone] iron-sulfur protein 1, mitochondrial [KO:K03934] [EC:7.1.1.2]
9329622  NADH dehydrogenase [ubiquinone] iron-sulfur protein 1, mitochondrial [KO:K03934] [EC:7.1.1.2]
9301068  NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial [KO:K03937]
9314546  NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B [KO:K03938]
9318194  NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B [KO:K03938]
9318338  NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [KO:K03939]
9307569  NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial [KO:K03940] [EC:7.1.1.2]
9325289  NADH dehydrogenase [ubiquinone] iron-sulfur protein 8-A, mitochondrial [KO:K03941] [EC:7.1.1.2]
9326244  NADH dehydrogenase [ubiquinone] iron-sulfur protein 8-B, mitochondrial [KO:K03941] [EC:7.1.1.2]
9309437  NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial [KO:K03942] [EC:7.1.1.2]
9308899  NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial [KO:K03943] [EC:7.1.1.2]
9318641  NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 [KO:K03945]
9301647  NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [KO:K03946]
9300274  probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial [KO:K03949]
9318838  NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 [KO:K03950]
9320637  NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-A [KO:K03952]
9309983  NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B [KO:K03952]
9320262  NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial [KO:K03953]
9304538  acyl carrier protein 2, mitochondrial [KO:K03955]
9318037  acyl carrier protein 1, mitochondrial [KO:K03955]
9299405  acyl carrier protein 3, mitochondrial [KO:K03955]
9322902  acyl carrier protein 2, mitochondrial [KO:K03955]
9320425  probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 [KO:K11352]
9317336  NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B [KO:K11353]
9328292  NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B [KO:K11353]
9311177  NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 [KO:K03963]
9303180  NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 [KO:K03965]
9321322  NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B [KO:K03966]
9330222  NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-A [KO:K03966]
9303916  external alternative NAD(P)H-ubiquinone oxidoreductase B3, mitochondrial [KO:K03885] [EC:1.6.5.9]
9322371  external alternative NAD(P)H-ubiquinone oxidoreductase B4, mitochondrial [KO:K03885] [EC:1.6.5.9]
9317146  internal alternative NAD(P)H-ubiquinone oxidoreductase A2, mitochondrial isoform X1 [KO:K03885] [EC:1.6.5.9]
9303533  external alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial [KO:K03885] [EC:1.6.5.9]
9328449  internal alternative NAD(P)H-ubiquinone oxidoreductase A1, mitochondrial [KO:K03885] [EC:1.6.5.9]
9308799  external alternative NAD(P)H-ubiquinone oxidoreductase B2, mitochondrial isoform X1 [KO:K03885] [EC:1.6.5.9]
9302813  succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial [KO:K00234] [EC:1.3.5.1]
9320201  succinate dehydrogenase [ubiquinone] flavoprotein subunit 2, mitochondrial [KO:K00234] [EC:1.3.5.1]
9304714  succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial [KO:K00235] [EC:1.3.5.1]
9313115  succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial [KO:K00235] [EC:1.3.5.1]
9302725  succinate dehydrogenase [ubiquinone] iron-sulfur subunit 3, mitochondrial [KO:K00235] [EC:1.3.5.1]
9307450  succinate dehydrogenase subunit 3-1, mitochondrial isoform X1 [KO:K00236]
9318138  succinate dehydrogenase subunit 4, mitochondrial [KO:K25801]
9309681  cytochrome b-c1 complex subunit Rieske-4, mitochondrial [KO:K00411] [EC:7.1.1.8]
9309680  cytochrome b-c1 complex subunit Rieske-4, mitochondrial [KO:K00411] [EC:7.1.1.8]
9311434  cytochrome c1 1, heme protein, mitochondrial [KO:K00413]
9304708  cytochrome c1 2, heme protein, mitochondrial [KO:K00413]
9311127  cytochrome b-c1 complex subunit 6 [KO:K00416]
9326150  cytochrome b-c1 complex subunit 6 [KO:K00416]
9310329  cytochrome b-c1 complex subunit 7-2 [KO:K00417]
9305342  cytochrome b-c1 complex subunit 7-1 [KO:K00417]
9313948  cytochrome b-c1 complex subunit 9 [KO:K00419]
9316189  protoheme IX farnesyltransferase, mitochondrial [KO:K02257] [EC:2.5.1.141]
9311618  uncharacterized protein LOC9311618 [KO:K02262]
9319021  cytochrome c oxidase subunit 5b-1, mitochondrial [KO:K02265]
9323903  cytochrome c oxidase subunit 5b-2, mitochondrial isoform X1 [KO:K02265]
9330461  cytochrome c oxidase subunit 5b-1, mitochondrial isoform X1 [KO:K02265]
9303002  cytochrome c oxidase subunit 6a, mitochondrial [KO:K02266]
9305593  cytochrome c oxidase subunit 6b-3 [KO:K02267]
9329798  putative cytochrome c oxidase subunit 6b-like [KO:K02267]
9302307  cytochrome c oxidase subunit 6b-2 [KO:K02267]
9326577  cytochrome c oxidase subunit 6b-1 [KO:K02267]
9328169  cytochrome c oxidase assembly protein COX11, mitochondrial [KO:K02258]
9324519  cytochrome c oxidase assembly protein COX15 [KO:K02259] [EC:1.17.99.9]
9302200  cytochrome c oxidase assembly protein COX15 [KO:K02259] [EC:1.17.99.9]
9300507  cytochrome c oxidase assembly protein COX15 [KO:K02259] [EC:1.17.99.9]
9324580  cytochrome c oxidase assembly protein COX15 [KO:K02259] [EC:1.17.99.9]
9318999  cytochrome c oxidase copper chaperone 1 [KO:K02260]
9330482  cytochrome c oxidase copper chaperone 2 [KO:K02260]
9310671  cytochrome c-2 [KO:K08738]
9326599  cytochrome c-1 [KO:K08738]
32283162  atpA; ATP synthase CF1 alpha subunit [KO:K02111] [EC:7.1.2.2 7.2.2.1]
9322934  uncharacterized protein LOC9322934 [KO:K02111] [EC:7.1.2.2 7.2.2.1]
32283049  atpB; ATP synthase CF1 beta subunit [KO:K02112] [EC:7.1.2.2 7.2.2.1]
9326183  ATP synthase gamma chain 2, chloroplastic [KO:K02115]
9310874  ATP synthase gamma chain 1, chloroplastic [KO:K02115]
9310651  ATP synthase subunit delta, chloroplastic [KO:K02113]
32283157  atpE; ATP synthase CF1 epsilon subunit [KO:K02114]
32283052  atpI; ATP synthase CF0 A subunit [KO:K02108]
32283047  atpF; ATP synthase CF0 B subunit [KO:K02109]
9303323  ATP synthase subunit b', chloroplastic [KO:K02109]
32283050  atpH; ATP synthase CF0 C subunit [KO:K02110]
9309445  ATP synthase subunit beta-3, mitochondrial [KO:K02133] [EC:7.1.2.2]
9307425  ATP synthase subunit beta-1, mitochondrial [KO:K02133] [EC:7.1.2.2]
9309446  ATP synthase subunit beta-1, mitochondrial [KO:K02133] [EC:7.1.2.2]
9315496  ATP synthase subunit gamma, mitochondrial [KO:K02136]
9299452  ATP synthase subunit delta', mitochondrial [KO:K02134]
9330389  ATP synthase subunit epsilon, mitochondrial [KO:K02135]
9309682  ATP synthase subunit O, mitochondrial [KO:K02137]
9313291  LOW QUALITY PROTEIN: uncharacterized protein LOC9313291 [KO:K02128]
9312202  ATP synthase subunit d, mitochondrial [KO:K02138]
9305502  uncharacterized protein LOC9305502 [KO:K02140]
9305693  uncharacterized protein LOC9305693 [KO:K02140]
9322094  uncharacterized protein LOC9322094 [KO:K02140]
9325282  V-type proton ATPase catalytic subunit A [KO:K02145] [EC:7.1.2.2]
9325117  V-type proton ATPase subunit B1 [KO:K02147]
9302877  V-type proton ATPase subunit B2 [KO:K02147]
9329157  V-type proton ATPase subunit B3 [KO:K02147]
9328779  V-type proton ATPase subunit C [KO:K02148]
9314304  V-type proton ATPase subunit D [KO:K02149]
9323977  V-type proton ATPase subunit E3 [KO:K02150]
9310745  V-type proton ATPase subunit E1 [KO:K02150]
9318638  V-type proton ATPase subunit E2 [KO:K02150]
9310973  V-type proton ATPase subunit F [KO:K02151]
110229978  V-type proton ATPase subunit G1 [KO:K02152]
9305711  V-type proton ATPase subunit G3 [KO:K02152]
9305840  V-type proton ATPase subunit G2 [KO:K02152]
110228161  V-type proton ATPase subunit H-like [KO:K02144]
9305240  V-type proton ATPase subunit H [KO:K02144]
9314620  V-type proton ATPase subunit a2 [KO:K02154]
9304955  V-type proton ATPase subunit a3 [KO:K02154]
9315228  V-type proton ATPase subunit a1 [KO:K02154]
9322121  V-type proton ATPase subunit c1 [KO:K02155]
9325098  LOW QUALITY PROTEIN: V-type proton ATPase subunit c2 [KO:K02155]
9303178  V-type proton ATPase subunit c1 [KO:K02155]
9329141  V-type proton ATPase subunit c2 [KO:K02155]
9304945  V-type proton ATPase subunit c1 [KO:K02155]
9314935  V-type proton ATPase subunit c''2 [KO:K03661]
9305340  V-type proton ATPase subunit c''1 isoform X2 [KO:K03661]
9313193  V-type proton ATPase subunit d1 [KO:K02146]
9313194  V-type proton ATPase subunit d1 [KO:K02146]
9303618  V-type proton ATPase subunit e2 [KO:K02153]
9302159  V-type proton ATPase subunit e1 [KO:K02153]
110230925  ATPase 9, plasma membrane-type isoform X1 [KO:K01535] [EC:7.1.2.1]
110229418  LOW QUALITY PROTEIN: ATPase 5, plasma membrane-type [KO:K01535] [EC:7.1.2.1]
110228699  ATPase 7, plasma membrane-type [KO:K01535] [EC:7.1.2.1]
9320248  ATPase 1, plasma membrane-type [KO:K01535] [EC:7.1.2.1]
110230446  ATPase 6, plasma membrane-type [KO:K01535] [EC:7.1.2.1]
110225470  ATPase 3, plasma membrane-type [KO:K01535] [EC:7.1.2.1]
9308689  putative ATPase, plasma membrane-like isoform X2 [KO:K01535] [EC:7.1.2.1]
110226106  ATPase 2, plasma membrane-type [KO:K01535] [EC:7.1.2.1]
9311649  ATPase 8, plasma membrane-type isoform X2 [KO:K01535] [EC:7.1.2.1]
9329003  ATPase 10, plasma membrane-type [KO:K01535] [EC:7.1.2.1]
9302579  ATPase 11, plasma membrane-type [KO:K01535] [EC:7.1.2.1]
9316337  soluble inorganic pyrophosphatase 3 [KO:K01507] [EC:3.6.1.1]
9314000  soluble inorganic pyrophosphatase 4 [KO:K01507] [EC:3.6.1.1]
110228370  soluble inorganic pyrophosphatase 6, chloroplastic-like [KO:K01507] [EC:3.6.1.1]
9320186  soluble inorganic pyrophosphatase 2 [KO:K01507] [EC:3.6.1.1]
9325453  soluble inorganic pyrophosphatase 1 [KO:K01507] [EC:3.6.1.1]
9307454  soluble inorganic pyrophosphatase 6, chloroplastic [KO:K01507] [EC:3.6.1.1]
9311044  soluble inorganic pyrophosphatase 5 [KO:K01507] [EC:3.6.1.1]
Compound
C00001  H2O
C00002  ATP
C00003  NAD+
C00004  NADH
C00007  Oxygen
C00008  ADP
C00009  Orthophosphate
C00013  Diphosphate
C00042  Succinate
C00080  H+
C00122  Fumarate
C00536  Triphosphate
Reference
PMID:16469879
  Authors
Sazanov LA, Hinchliffe P.
  Title
Structure of the hydrophilic domain of respiratory complex I from Thermus thermophilus.
  Journal
Science 311:1430-6 (2006)
DOI:10.1126/science.1123809
Reference
PMID:16584177
  Authors
Hinchliffe P, Carroll J, Sazanov LA.
  Title
Identification of a novel subunit of respiratory complex I from Thermus thermophilus.
  Journal
Biochemistry 45:4413-20 (2006)
DOI:10.1021/bi0600998
KO pathway
ko00190   
LinkDB

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