Alteromonas mediterranea DE1: amad1_04100
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Entry
amad1_04100 CDS
T02340
Name
(GenBank) NodT family RND efflux system outer membrane lipoprotein
KO
K18139
outer membrane protein, multidrug efflux system
Organism
amaa
Alteromonas mediterranea DE1
Pathway
amaa01501
beta-Lactam resistance
amaa02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
amaa00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
amad1_04100
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
amad1_04100
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amaa02000
]
amad1_04100
01504 Antimicrobial resistance genes [BR:
amaa01504
]
amad1_04100
Transporters [BR:
amaa02000
]
Other transporters
Pores ion channels [TC:
1
]
amad1_04100
Antimicrobial resistance genes [BR:
amaa01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
amad1_04100
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
amad1_04100
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
amad1_04100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DUF6847
UvrA_inter
ALP_N
COG5_N
Motif
Other DBs
NCBI-ProteinID:
AFV84346
LinkDB
All DBs
Position
914102..915607
Genome browser
AA seq
501 aa
AA seq
DB search
MSNNTRLLKKPLFMAIGSALLVQACAIPTIETRDPNLSLPEKFSASNELSTGSSTGLGAD
KNNDASNGEAKIEWEAWFNDPYLTALVETAVTNNKEVAVLVQRINMASNEVYAREGEYLP
SVSAGAAIETEKVGEYTREGAVEEQLDIREGEAFPDPLANLKLGLNASWEVDIWHKLRDA
SKVASLEYLASIESKNFFITQLVSEVSRSYYELLALDNKLANIDATIKLQRNVIHTINTL
KEYGRASSLPVARFNAEVKKNESERFLIKQEIVEKENTINLLLGRMPQPIQRNSNALFSE
DIVKPNIGVPASLLENRPDIREAELTLQAANLNIDVAKANFYPSLELKAGVGLSAFDSRY
LFNVPESLAYSLSGDIFAPLINRRAIEAVYKNASAEQIQAAYEYELTLLKAVTEVSNSLS
KLDNLGRSADAKKAQISSLESSVDIANRLFTSAHGEYLEVLLAQREALEARSEFIETRQQ
QLAALVDLYQALGGGWQSSST
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgagtaataacacgcgtcttttgaaaaagcctctttttatggcgattggcagcgcactt
ctagttcaagcgtgtgctatcccgacaatagaaactcgggacccgaatttatcgttgccg
gaaaagttcagcgcaagcaatgagctaagtactggaagcagtacaggcttaggcgccgac
aaaaacaacgacgccagtaatggtgaagcaaaaattgaatgggaggcgtggttcaacgac
ccatatttgacagcattagttgaaaccgctgtaacgaataacaaggaagtcgccgtactt
gtacaacgcattaatatggcgtctaacgaggtgtatgcgcgggaaggtgagtatttacca
agtgtgtctgcaggtgctgctattgaaaccgaaaaagtgggtgaatatacgcgagaaggc
gcggtggaagagcagcttgatatcagagaaggtgaagcattccctgaccctttagctaat
ttaaagcttgggttgaatgcgtcttgggaagtggacatctggcataagcttagggatgct
tcaaaggtagcgtcactcgaatacttagcttctattgagagtaaaaacttctttatcact
caacttgtttctgaagtgtctcgtagctactacgaactattagctttggataacaagcta
gcgaatattgatgccacaataaagctgcagcgcaacgttatacataccattaatacactt
aaagaatatggccgagcttcttctttacctgtagcgcgctttaacgctgaagtgaagaaa
aatgaaagtgaacgctttctcattaaacaagaaattgtggagaaagagaacacaatcaat
ttattgttagggcgcatgcctcagcctattcaacgaaatagtaacgctttgtttagcgaa
gacattgttaagcctaatattggagtgcctgcttcactgttagaaaaccgacccgatatt
cgagaggctgaacttacgctgcaggctgcaaacttaaatatagatgtagctaaagcgaac
ttttacccgtcattagagcttaaagcaggggtagggttgtcagcgtttgatagccggtat
ttgtttaacgtaccagagtcactggcctattcgctatctggcgatatctttgctccttta
attaatcgacgtgctattgaagctgtttataaaaatgcgagtgcggagcaaatacaggcc
gcctatgagtacgagcttacgctgctaaaagcggtgacagaagtgtcgaatagtttgtct
aagttggataatctgggcagaagtgcggatgctaaaaaagcgcaaatttcttccttggaa
tcgtcagttgatatcgcaaatcgtttgtttacgtcagcgcatggtgagtatttagaagtg
ctattggcgcagcgcgaagcattagaagcgcgtagtgagtttatagaaactcgtcagcag
caactggcagcactcgtcgacttatatcaggccctaggaggaggctggcaatcttcgtcg
acctaa
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