Astyanax mexicanus (Mexican tetra): 103021325 Help Entry 103021325         CDS       T05042                                  Symbol traf6 Name (RefSeq) TNF receptor-associated factor 6   KO K03175   TNF receptor-associated factor 6 [EC:2.3.2.27] Organism amex  Astyanax mexicanus (Mexican tetra) Pathway amex04010   MAPK signaling pathway amex04120   Ubiquitin mediated proteolysis amex04140   Autophagy - animal amex04144   Endocytosis amex04620   Toll-like receptor signaling pathway amex04621   NOD-like receptor signaling pathway amex04622   RIG-I-like receptor signaling pathway amex05132   Salmonella infection amex05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:amex00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     103021325 (traf6)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     103021325 (traf6)  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     103021325 (traf6)    04140 Autophagy - animal     103021325 (traf6)  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     103021325 (traf6)    04621 NOD-like receptor signaling pathway     103021325 (traf6)    04622 RIG-I-like receptor signaling pathway     103021325 (traf6)  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     103021325 (traf6)   09171 Infectious disease: bacterial    05132 Salmonella infection     103021325 (traf6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:amex04131]     103021325 (traf6)    04121 Ubiquitin system [BR:amex04121]     103021325 (traf6) Enzymes [BR:amex01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      103021325 (traf6) Membrane trafficking [BR:amex04131]  Endocytosis   Clathrin-mediated endocytosis    Ubiquitin E3 ligases     103021325 (traf6) Ubiquitin system [BR:amex04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     103021325 (traf6) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 zf-TRAF zf-C3HC4 zf-C3HC4_2 TRAF6_Z2 zf-RING_2 zf-C3HC4_3 zf-RING_UBOX zf_UBZ zf-C3HC4_4 TRAF3_RING zf-RING_5 ATG16 SlyX U-box HAP1_N DUF6779 DUF4472 zf-TRAF_2 Zn_ribbon_ACC zf-Di19 Motif Other DBs NCBI-GeneID:  103021325 NCBI-ProteinID:  XP_022520960 Ensembl:  ENSAMXG00000007558 UniProt:  W5KJK9 LinkDB All DBs Position 23:1446683..1459645 Genome browser AA seq 542 aa AA seqDB search MACSDTHKSSLDESNNDWPSSCAAAMEKERESYLSPTENPSTLSVSPSLQPDQQGYDVDF DPPLESKYECPICLMGLRSAVQTPCGHRFCNCCIRKSIRDTGQKCPVDNEVLTEDQLFPD NFAKREILSLTVRCRNVGCMEKMELRHLENHIPHCKFATVPCPQCQESVWKSELEEHINQ ECSHRLITCPDCAENIIYAEKQFHEQLCLFANTVCEYCNMELIRNQLASHCDTDCLKAPV ACTFSIFGCREKMLRNDLALHMQEFTQMHMRYMADVLRNQTINGLISSHSASAASPTDSR GASSRPEGACQCNQELQQMRETVLELESRLVRQDHKLRELSIRNETQSTQMTELRKKLAS LEESMRELQAQQYQGVYVWRLEGFSTHIRNQEAGHPVVLHSPPFYTGRPGYKLCLRLHLQ TPNAPRCSNYISLFVHTMQGEFDSQLSWPLQGTIRLAVLDQAEGQHHVEVMETKPDLQAF QRPTVQRNPKGFGYVTFMQLQALHQRGFVRDDVLMVRCEVTPRFDASLRREGVQPRGLEP SL NT seq 1629 nt NT seq  +upstreamnt  +downstreamnt atggcgtgcagcgacacacacaagtccagtctggacgagtccaataacgactggccatcc agctgtgcggcggcgatggagaaggagcgggagtcctacctgagccccacggagaacccc tccaccctcagcgtgtcccccagcctccagcctgaccagcagggctacgacgtcgacttc gaccccccgctggagagcaagtacgagtgtcccatctgcctgatgggcctgaggtcagcg gtgcagacgccgtgcggccatcgcttctgcaactgctgcatcaggaaatctatccgagac acggggcagaaatgtccggtggataatgaagttctgacggaggaccagctcttcccggat aactttgccaagagagaaatcctgtccctcactgttcgctgcagaaacgtcggctgtatg gagaaaatggagctccggcacttagagaatcacataccgcactgtaagttcgccacagtg ccgtgccctcagtgccaggaatcggtgtggaagagtgagctggaggaacacattaaccag gagtgttcacaccgcctgattacctgccctgactgtgccgagaacatcatctacgctgag aaacagtttcatgaacagttgtgcctctttgcaaatacagtgtgtgaatactgtaacatg gagctcattcgtaatcagttggcgtcgcactgcgacacagactgtctgaaagctcccgtt gcctgcactttcagcatttttggttgtcgagaaaagatgctgaggaacgacctggccctc cacatgcaggagttcacgcagatgcacatgcgctatatggccgacgtcctgcgcaaccag accatcaacggcttaatttcttctcactctgcctcggcggcgtctccgacggacagtcgc ggcgcgtcctcccggccagagggggcgtgccagtgcaaccaggagctgcagcaaatgcgc gagacggtcctggagctggagagccggctggttcggcaggaccacaagctgcgggagctg agcatccgcaacgagacgcagtccacccagatgacggagctgcggaagaagctggcctcc ctggaggagtccatgcgggagctgcaggctcagcagtaccagggcgtctacgtgtggcgg ctggaagggttctcgacccacatccgtaaccaggaagcgggtcatcccgtggtccttcac agcccgcccttctacacgggccggccgggctacaaactgtgcctccggcttcacctgcaa acccccaacgcgccacgatgctccaactacatctctctgtttgtgcacaccatgcaaggg gagttcgacagccagctgtcctggcctctccagggcaccatccgactcgccgtgctggac caggcggagggtcagcaccacgtggaggtgatggagaccaaaccggacctccaggctttc cagaggcccacggtccagcgcaaccccaaaggcttcggctacgtcacctttatgcagctg caggccctgcaccagagaggcttcgtaagagacgatgtgttaatggtgcgctgtgaggtc acgccgcgtttcgacgcaagcctaaggagagagggagtgcagccgaggggccttgagccg tcgctttga

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