Astyanax mexicanus (Mexican tetra): 103022197
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Entry
103022197 CDS
T05042
Name
(RefSeq) platelet-derived growth factor subunit A
KO
K04359
platelet-derived growth factor subunit A
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04010
MAPK signaling pathway
amex04020
Calcium signaling pathway
amex04510
Focal adhesion
amex04540
Gap junction
amex04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
103022197
04020 Calcium signaling pathway
103022197
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103022197
04540 Gap junction
103022197
09142 Cell motility
04810 Regulation of actin cytoskeleton
103022197
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
amex04052
]
103022197
00536 Glycosaminoglycan binding proteins [BR:
amex00536
]
103022197
Cytokines and neuropeptides [BR:
amex04052
]
Cytokines
Growth factors (RTK binding)
103022197
Glycosaminoglycan binding proteins [BR:
amex00536
]
Heparan sulfate / Heparin
Growth factors/receptors
103022197
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF_N
PDGF
Motif
Other DBs
NCBI-GeneID:
103022197
NCBI-ProteinID:
XP_007236087
Ensembl:
ENSAMXG00000013556
UniProt:
W5L279
A0A8B9RD97
LinkDB
All DBs
Position
23:21837167..21858986
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AA seq
202 aa
AA seq
DB search
MRGALLCLLACCLSLIPTSTAAAAAEAESIPRELIERLSSSEIRSISDLQRLLESHSLGA
ENEAVQETKWRYHKEGFYDSSSLKNSQTHPRRKRSIEEAVPAVCKTRTVVYEIPRSQVDS
TAANFLIWPPCVEVTRCSGCCNTSNMRCHPVKKSHRTVKVAKVEYVRRRPRLREVQVRLE
DHLECVCMSKHHTESRLHTDIR
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgagaggggcgctgctctgcctgctggcctgctgcctttctctcatacccaccagcacc
gccgccgctgctgctgaggcagagtcgattccccgggagctgatagagagactctccagc
agtgagatccgcagcattagcgacctccagcggctcttggagtcacactccctgggtgca
gaaaatgaggcagtacaggagacgaaatggcgctaccataaagagggtttctacgacagc
agcagcctcaagaactcacaaacacaccccagacgcaagaggagcatcgaggaggcggtc
ccagcagtgtgtaagactcgtacagtggtgtatgaaattcctcgtagtcaggtggactcc
acagcggcgaacttcctcatctggcctccgtgtgtggaggtgacccgctgctcaggctgc
tgcaacaccagcaacatgcgctgccacccagtcaaaaagtcacacaggactgtcaaggtg
gcgaaggtggagtacgtgcggcggagaccgaggctgcgggaggtgcaggtgcggctggag
gatcatctggagtgtgtgtgcatgtccaaacaccacacagagtctcgcttacacacagat
ataaggtga
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