Astyanax mexicanus (Mexican tetra): 103023350
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Entry
103023350 CDS
T05042
Symbol
tlr8b
Name
(RefSeq) toll-like receptor 8b
KO
K10170
toll-like receptor 8
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04142
Lysosome biogenesis
amex04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
103023350 (tlr8b)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
103023350 (tlr8b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
amex04054
]
103023350 (tlr8b)
04090 CD molecules [BR:
amex04090
]
103023350 (tlr8b)
Pattern recognition receptors [BR:
amex04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
103023350 (tlr8b)
CD molecules [BR:
amex04090
]
Proteins
103023350 (tlr8b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
TIR
TIR_2
LRR_5
LRR_NXF1-5
LRR_6
Motif
Other DBs
NCBI-GeneID:
103023350
NCBI-ProteinID:
XP_022520305
Ensembl:
ENSAMXG00000025614
LinkDB
All DBs
Position
20:complement(180574..184656)
Genome browser
AA seq
1019 aa
AA seq
DB search
MFMFILISLFYSSHALSWSWRTLPCDITLSNTSVSLDCSYRKLHTVPKICIWNVTYLNLA
NNQIKTVWRDSFQKLKNLTVINLKNNQIQNVLHSDSLVFSGLENLKILLLDDNHLSTVPT
DLPPGLECLSLIGNHIKIIGPSDFVGVENITEIRLNRNCYRTTGCNGSMIIQNGTFSHLK
NLIILNLSQNRLKTIPPDLPPSLQQLHLLQNTIQHVQQSDLQHLSNLTFLDLSGNCPLCF
NAPFPCSPCRTTNNSLQIRNHAFTHLSKLQELRLSGNSLQILNPSWFRNLTSLKYLYLSF
NNLINQIERGHFFSALPYVEIIDLSYNNPPQTFSKTLKLSKGFSELTSLRSLHLEGYVFS
VLCEDDLNPLFGLKNLSVLNLGVNFLQNINLTVFNRFYNLSVISLIENRLTFTGLRSAYS
QGLCRSDMNSEIQEEPELKSPYIHRDSQFRLVPPFIKPECLKTGPVLDLSKNNMFYLNPD
YLQAVGNITCLNLSYNEISSYFNGTEFIQFPKLKYLDLSHNRIYLRLKSAFDELKELEIL
DLSHNEHYFEIAGVSHTLAFLENLEHLKVLNLSWNEINTLSNKTLISRSLEELRFQGNRL
DIMWKKYQGFKYLFKFLTNLTLLDISYNKLREIPQDILSFFPSTLKYLNLNRNQLRNFCW
EQLHFLPELETLDLSKNKLDFVNERTLAHSRSLAVLDLSHNLISTLGIDILKQAKRLWSL
NLSFNRLEIINDTSFQVNDSSYLRMLHLESNPLRCTCDLLDFVLWLENSEVEVPHLATGV
LCDLPAPKKGQPMINLDLKNACINDGTAQVLYIISFTFTLTVMVTAITVHLFYWDLSYVL
HYWKSKMKIHRSSEHQCLYDAFVMYDTNDPLASDWVLNQLRVELEDVGETVRPLCLEERD
WTPGVSIMENLNQSIRWSRKTVFVLTEGFVCSGVFKVAAYLAQQRLLEEGVDVMVLILLE
PVLQHSRILHLRRCLCGNSVLEWPRNPSAQNWFWQSLRNAIKKEKQGMQNKLFKNYFTT
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgttcatgtttattttgatatcactcttttattcatcacatgctctcagctggtcttgg
aggactctcccatgtgatattacattatccaacacctccgtttctctggactgttcatac
cggaaactccacactgttcccaaaatctgcatctggaacgtcacgtatctgaacctggcc
aataatcagataaagacggtctggagggattccttccagaagctgaagaacctgaccgtc
ataaatctcaaaaataatcagatacagaatgttcttcactcggattcactcgttttttca
ggtttggaaaatctcaaaatattattactggatgataatcacctctccaccgttcccaca
gaccttcctcctggactagagtgcctgagtttaattggaaatcacatcaagatcattgga
ccttcagattttgtgggagtagaaaacattacagagatcagattaaacaggaactgctat
cgtacgactggatgcaacggttccatgattattcagaatggaacgttttctcatttaaaa
aacctcatcatccttaatttatcccaaaacagactaaaaacaatcccaccggatttaccc
ccatctctccaacaactccacctactgcagaacaccatccagcacgtccaacagtctgac
ctccaacacttatctaatctcacctttctggatttatctggaaactgtccgctgtgtttt
aacgccccgtttccctgcagcccctgtagaaccaccaataactccctgcagatccgcaac
cacgccttcactcatctctccaaacttcaggagctgcgcttatcaggaaactcactacag
atcctcaacccatcctggttcagaaatctaacatctttaaaatatttatatctttcattc
aataatctgatcaatcaaattgaacgtggtcatttcttttccgcattaccgtatgtcgag
atcattgatctttcctacaataatccaccacaaacgttttccaaaactctgaaactttcc
aaaggtttttccgagctgacgtctctgaggagcctccacctggagggatacgtcttctcc
gtactctgtgaagatgatcttaatcctctcttcggtttaaaaaacctttcagtcctgaat
ctgggagtaaactttctccagaacatcaatctaactgtatttaatcgattttacaatttg
tctgtgattagcctgattgagaacagactgacgtttacaggtctgagatcagcttattct
cagggtttatgcaggagtgatatgaactctgagatccaggaagagcctgagctgaaaagt
ccctacatccaccgggattcacagttccgcctcgttcctcccttcataaaacccgagtgt
ctgaagacggggccggtgttagacctcagcaaaaacaacatgttctacctcaatccagat
tatcttcaggctgtgggaaacatcacatgtcttaatctgtcctataatgaaattagctcc
tattttaacggcactgaattcattcagtttccaaagctgaaatatttggatttgtctcat
aatcgaatctacctgcgcctaaaatctgcatttgatgaattaaaggagttggagattctg
gatttaagtcacaacgaacattattttgagatagcaggagtcagtcacaccctggccttc
ctggaaaaccttgagcatctaaaagtcttgaatctcagctggaacgagatcaatactctg
agtaataagacgctgatcagcagatcgctggaggagttgcggtttcaagggaatcggctg
gatatcatgtggaaaaagtaccaaggttttaaatatctcttcaaatttctaacgaacctc
acacttctcgatatctcctacaacaaactcagagaaatcccgcaggacatcctgagcttc
ttcccttcaacactcaaatatctgaacctgaacagaaaccagctcaggaacttctgctgg
gagcagctgcacttcctgcctgagctggaaactctggatttaagtaagaataagctggac
tttgtgaacgagaggacgttagctcactctcgctcactggctgttttagacctgagccac
aacctaatctctacgctgggcatcgacatcctgaaacaggccaaacgtctctggagttta
aatcttagttttaatcgactggaaatcatcaacgacacttccttccaggtgaacgactca
agttatctccgcatgctccacctggagagtaaccctttacgctgcacgtgtgaccttctg
gactttgttctgtggttggagaacagtgaggtcgaggttcctcatctggcaacaggagtc
ttatgtgatctgccggcccccaagaaaggccagccaatgatcaacctcgatctgaaaaac
gcctgcatcaacgacggcacggctcaggtcctctacatcatctcattcaccttcaccctg
actgtgatggtgactgccatcaccgtacacctgttctactgggacctgtcctacgtcctt
cactactggaaatccaagatgaagatccacagatcatcagagcaccagtgcctctacgac
gcctttgtcatgtacgacaccaacgacccgctggcgtctgattgggtgctgaaccagctg
agggtggagctggaagacgtgggcgagacagtccgtcccctctgtctggaggaaagggac
tggacgcccggcgtgtccatcatggagaacctcaaccagagcatccggtggagcaggaag
acggtcttcgtgctgacggagggcttcgtctgcagtggggtctttaaggtggcagcgtat
ctggctcagcagaggcttctggaggaaggtgtggacgtaatggtgttaatcctgctggaa
ccagttctccagcattccagaatcctgcacctgcggcggtgtctgtgtgggaacagcgtt
ctggaatggcccaggaacccttcagcccagaactggttctggcagagtctgaggaacgcc
atcaaaaaggagaagcaggggatgcagaacaagctgttcaagaactattttactacctaa
DBGET
integrated database retrieval system