Astyanax mexicanus (Mexican tetra): 103023552
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Entry
103023552 CDS
T05042
Name
(RefSeq) breast cancer type 1 susceptibility protein homolog isoform X1
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03440
Homologous recombination
amex03460
Fanconi anemia pathway
amex04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103023552
09124 Replication and repair
03440 Homologous recombination
103023552
03460 Fanconi anemia pathway
103023552
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
amex01009
]
103023552
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
amex04121
]
103023552
03036 Chromosome and associated proteins [BR:
amex03036
]
103023552
03400 DNA repair and recombination proteins [BR:
amex03400
]
103023552
Enzymes [BR:
amex01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103023552
Protein phosphatases and associated proteins [BR:
amex01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
103023552
Ubiquitin system [BR:
amex04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103023552
Multi subunit type E3
BRCC complex
103023552
Chromosome and associated proteins [BR:
amex03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
103023552
DNA repair and recombination proteins [BR:
amex03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
103023552
BRCA1-A complex
103023552
BRCA1-B complex
103023552
BRCA1-C complex
103023552
BRCA complex
103023552
FA (Fanconi anemia) pathway
Downstream FA components
103023552
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
BRCT_2
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-Nse
RING_XB3-XBAT31
zf-RING_5
BRCT_3
RTT107_BRCT_5
zf-ANAPC11
zf-RING_4
zf-RING_10
TRAF3_RING
zf-MIZ
Motif
Other DBs
NCBI-GeneID:
103023552
NCBI-ProteinID:
XP_022525124
Ensembl:
ENSAMXG00000036089
LinkDB
All DBs
Position
15:complement(2830061..2888943)
Genome browser
AA seq
1603 aa
AA seq
DB search
MTAPKAEDIKRGIAVIWENLQCPICLDLMNAPVSTRCDHQFCKFCLMKLLERSKKKETSC
PVCKMNVTKRSLKESPGFQRLVEGLQNLVQSYEFDTCTSYFTGIPQSRKETSVETESRDQ
QCSEENGSSGNDVTDKSASHFSSAAVKDAFAELMGLVDSCTVNSEQDCFDSGLGGPVNKA
DELQDVPSRIEDRQSNSPIPDSSGSDGKTDLHKRRSSRRPKRVGLEPDRIADKRQKKSVE
KVAEWLLKISPSSDTQTRYRSRDPSVPADSDSEKESVCSSSPTEAYPKDGDEDDVNPPKE
VRGRCLEEKVFGAVYKRERKGGKTKVNRPVSPEKETVANPVPFNLVQEEEMMTRHGLKRK
RSCRLTPADFIKKSSSDGREAEVKEPVDSVTHNAVEENKQVELNTEEQIEILGECDKIAE
LSADAKCDNTVKNMEESPAIEVPLKRSGRRSKSKMQDIWQNVDLDLKEKENICDNRTSRK
RRSNRSSCELTKDGHLDESKNAKCTKSLTLVDAAANNVDVMEQLKNKPKIVEAEINIESY
PSSADPRSPDARKTRRSLRLQAFTTEIQGTLKQRRTTKPSSGPETHPLDNPSHFNCLDQP
NVDKVNANEENVDADQGIGSTQQSRSGKTDLLIMKNGCVFNSSLGTIEAVRTNEETAISP
CVSEGQGPEQNSVLSIIPDTVAQDGPSLPCSSVAASSAFPLQAVTLDSSLPEKSQTSPSA
GFVAPSVVQTLRDAHCERGGIEVEGETNDSELDTELLMKSFKASKRKSFHLGSPKPSPKT
VQERLLTRTDEEQKLQYQIPTTCKDDELTSDLATICHNDLPPSSNASKLPLCEESSQRSQ
SSFGNAAVASLIQANASVATGDQKEAFLKNSGNSTCSGLSPNRVARSSQDSKLPTNSDSA
ASYQGFFPKVTSEESSICSSSEVQKNELQKSPKLGTCQPRIAEMSNKVEGSDVQTKHSSD
SNKSPNIAAAGSPNLGAHSNQFESSITPDGLIPKGPVPYECQVTEPASNHSLNEENDAGS
QPCVPRKRRAQRLKSSESELSVEDDSLPTLAHIFKSHRLPSHSGQEPNQTSEISELDNQE
PDPGYQSPADQEPDPGYQSPADQEPDPGYQSPADQEPDPGYQSPADQEPDPGFQSPADQA
NKSNEATPEAQSQNQECPENANATADDYHLPQPSCREEWVTSSQGSVDLFGTPEESEAVG
ICGNVAVSRDSSQYSSEIITTQQKEEMQQELCRLERMMALVSEALQKKEKDTSAKTQNKA
LNPTHSELQSAADPDQAEPCSPALPADRQSGLDSDGDHSGVSPGPAAPDGLCAPESQPLL
TTDQAKTGRRVSRSRQKSQGRGRKSSQKAEAGLSLRNHNTTSEGSVTELTKGNEAKEAQK
QTRGADMRRLGSSSTAGKMELVASGLSASELMLVKKFARKMHGHLSKEMTPGTTHVIIKT
DEDLVCERTLKYFQGIAGRKWVVSFLWISECFNQGQVLDEAQFEVRGDVVNGHNHNGPLK
SRTTSDGLLMKGYEICFQGSFTAMTTDQMEAMVEMCGATVVKDPLMFSKHIESKCQLVVV
QPGSDDSQTYYRALQKKATVVSRSWLLDTISTYSLQNPQDHKP
NT seq
4812 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctcccaaagccgaggacatcaagcggggaattgctgtgatatgggagaatttg
cagtgtccaatatgtttggacttgatgaatgcaccagtatcgactaggtgtgatcaccag
ttctgcaagttctgcctgatgaaactgctggaaaggagtaaaaagaaagagacgagctgc
cctgtgtgcaagatgaatgtcactaaaaggagtctgaaagaaagtccagggttccagagg
ctggtggaaggactgcagaatttagtccagtcttatgaatttgacacctgtacaagctat
tttacaggaataccacagagcaggaaagaaaccagtgtggaaacagagtccagagatcag
cagtgcagtgaggaaaatggctcctcagggaacgatgtgacagataagtcagcatctcat
ttctcctcggctgcagtgaaggatgcatttgcagaactcatgggtcttgtggattcctgt
acagttaattcagagcaggactgttttgacagtggtcttggcggtcctgttaataaagca
gatgagcttcaagatgttccttcaagaatagaagaccgacagagtaattcacccatacct
gatagcagcggttctgatggtaagactgacctacacaagagacggtcaagcagaagacca
aaaagagtaggcttggagccagacagaattgcagacaaaagacaaaagaaaagtgtggaa
aaagtagcagagtggttgctaaagatttcaccttcatcagacacacaaaccagatacagg
agtagagatccctcagttcccgctgatagtgattctgagaaggagagtgtgtgttcatcc
tcccctacagaggcttatccgaaagatggcgatgaggatgacgtcaatccaccaaaggag
gtgcgtggacgttgtctagaggaaaaggtttttggggctgtctataaacgtgaacgtaaa
ggtggtaaaaccaaagtaaacagacctgtctctcctgaaaaagagaccgtggccaaccct
gttccctttaatttggtgcaagaggaagaaatgatgacacgacatggccttaagagaaag
aggagctgtaggctgactccggcagatttcattaagaaatcatcttctgacggtagagaa
gcagaagttaaagagcccgtggactctgttactcataatgctgtggaagaaaacaagcaa
gttgaattaaatactgaggaacaaatagaaattttgggagagtgtgacaagatagcagag
ctctctgcagatgcaaaatgtgacaatacagttaaaaacatggaagaaagtcctgcgatt
gaagtacctttgaagagatcagggagaagatcaaagtcaaaaatgcaggatatatggcaa
aatgtggatcttgacttaaaagaaaaagaaaacatttgtgacaatagaacaagtcgcaag
aggcggagcaataggagcagctgtgagctgacaaaagatggccacttggatgaaagcaag
aatgcaaagtgtacaaaatcccttacccttgtggatgcggctgctaataatgttgatgta
atggagcagttgaaaaataaaccaaaaatagtggaagcagaaattaatattgagagttac
ccaagcagtgcagatccacgatctcctgatgctagaaaaacaagaagaagtttaaggctt
caggccttcactacagaaattcagggaactctgaaacagagacgaactacaaaaccttcc
agtggacctgaaactcatccgttagataatccatcacactttaattgtttggaccaacct
aatgtggataaagtgaatgcaaatgaagaaaatgttgatgctgatcagggtattggaagt
actcaacagtctcgcagtggaaaaactgacctgctgatcatgaaaaatggatgtgtattc
aacagcagcttaggaacaattgaggcagtgcggactaatgaggaaacagctatttctcca
tgtgtttcagagggacaaggccctgaacaaaattctgtcctgtccattattccagacaca
gtggctcaagatggaccaagccttccttgttcttctgtggctgccagctctgcatttcca
ttacaggctgtcacactagactcatccttaccagagaaaagccagacgtctccatccgca
gggttcgtcgccccgtctgttgtacagacattgagagatgctcattgtgagcgtggaggc
atagaagtggaaggtgagaccaatgatagtgaacttgatacagagcttctaatgaagtcc
ttcaaagcttccaaaagaaaatctttccacctgggcagccccaagccttcacctaaaaca
gtccaggagaggcttctaaccaggactgacgaggaacagaagctgcaatatcagatacca
accacttgtaaagacgatgaactaacatcagatcttgcaaccatttgccataatgacttg
cctccatcttcaaatgcttctaagcttccgttatgtgaggaatcgtctcaaaggtctcag
agcagttttggtaatgcagctgttgcaagtcttatccaagcaaatgcatctgttgccaca
ggagatcaaaaggaagcttttctgaagaactccggcaacagcacatgttcaggcctaagt
cccaacagagttgcaagatcttctcaagattccaagcttcctacaaattctgactctgca
gcatcctaccaggggttctttcctaaagttacttcagaggagtcatcaatctgcagcagc
agcgaagtccaaaagaatgagctccagaaatctccaaaattaggtacttgtcaaccaagg
attgccgagatgtcaaacaaagtcgagggcagcgatgtgcagacaaaacattcttcagac
tcaaacaaaagcccaaacatcgcagcagcaggttcaccaaatcttggagctcacagtaat
caatttgaatcctcaatcaccccagatggactcataccaaaaggtcctgttccttatgaa
tgtcaagtcacagaacctgcatctaatcacagtttgaatgaggaaaatgatgcagggtct
cagccgtgcgtgccgagaaagaggagggctcagaggctcaagtcctcagagtctgagctc
agtgttgaagatgattctcttccaacactggctcatatattcaaatctcaccgtttaccc
tcacactctgggcaggaaccaaatcagacctctgagatttctgagttagataaccaagaa
ccagatccaggctatcaatctccagctgaccaagaaccagatccaggctatcaatctcca
gctgaccaagaaccagatccaggctatcaatctccagctgaccaagaaccagatccaggc
tatcaatctccagctgaccaagaaccagatccaggctttcaatctccagctgaccaggct
aacaaatcaaatgaagcaacaccagaggcacagtctcagaatcaggaatgtcctgaaaat
gcaaatgctacagcagacgattaccatctacctcaaccttcctgcagagaggaatgggtt
acatcgagccaaggatctgtggatctcttcgggacgccagaagaaagtgaagccgttggt
atttgtggaaatgttgcagtttccagggattcctctcagtactcgagtgagattatcacc
acacagcagaaagaggagatgcagcaggagctgtgtaggctggagaggatgatggctctg
gtgtctgaggctctccagaagaaggagaaggacacaagcgccaaaacccagaacaaggct
ctcaaccctactcactctgaactacagtcagctgctgaccctgaccaggctgagccgtgc
agccctgcactccctgcagacaggcagagcggccttgattctgacggagatcacagtggg
gtgtcccctggccctgcagctccagacggcctgtgtgctcccgagtcccaacctctgttg
acgacagaccaggcaaagacagggcggcgggtcagcaggagccgtcagaaatctcagggc
agggggaggaagtcttcacagaaggcagaagctgggttatctctcagaaatcacaacacc
acctcggagggttcggttacggagctgactaagggaaacgaggcaaaagaagcccagaaa
caaacccgtggagcggacatgcgcagactggggtccagcagcacagcagggaagatggag
ctggtggcttctgggctcagtgccagcgaattgatgttggtgaagaaatttgccaggaaa
atgcacggccatctaagtaaagagatgacccccggtactacccatgtcatcattaagaca
gatgaggacctcgtgtgtgagcgcaccttaaagtactttcaggggatcgccggcaggaag
tgggtggtgagcttcctgtggatctcggagtgctttaatcaaggccaagttctagacgag
gctcagtttgaagttcgtggagatgttgttaatggacacaaccacaacgggcccttaaaa
agccggaccacctctgatgggttgctgatgaaaggatacgagatctgcttccagggatcc
ttcacagcgatgactacagatcagatggaggctatggtggagatgtgtggcgctactgtt
gtaaaagacccgctcatgttctccaaacacatagaaagtaagtgtcagctggtggtggtg
cagcctggttctgatgactctcaaacttactacagagctctgcagaagaaagccacagtg
gtgtctcgtagctggctcttggataccatatcaacctacagcctccagaatccccaggac
cataaaccctga
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integrated database retrieval system
