Astyanax mexicanus (Mexican tetra): 103025536
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Entry
103025536 CDS
T05042
Symbol
pbx1a
Name
(RefSeq) pre-B-cell leukemia homeobox 1a isoform X1
KO
K09355
pre-B-cell leukemia transcription factor 1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
103025536 (pbx1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
103025536 (pbx1a)
Transcription factors [BR:
amex03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
103025536 (pbx1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PBC
Homeobox_KN
Homeodomain
LZ3wCH
UCH
DUF7260
Motif
Other DBs
NCBI-GeneID:
103025536
NCBI-ProteinID:
XP_049334877
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Position
4:complement(56780084..56917650)
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AA seq
426 aa
AA seq
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MDEQPRLMHSHGVVGMAGHPGLGQHMPDGSEGEGRKQDIGDILQQIMTITDQSLDEAQAR
KHALNCHRMKPALFNVLCEIKEKTVLSIRGAQEEEPPDPQLMRLDNMLLAEGVSGPEKGG
GSAAAAAAAAAAGGAGADNSAEHSDYRAKLSQIRQIYHTELEKYEQACNEFTTHVMNLLR
EQSRTRPISPKEIERMVGIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFNKQA
TEILNEYFYSHLSNPYPSEEAKEELAKKCSITVSQVSNWFGNKRIRYKKNIGKFQEEANM
YAAKTAVTAASASAHGSQANSPSTPNSAGSAGSFNMSNSGDLFMSVQSLNGDSYQGGQVG
ANIQSQVDTLRHVISQAGGYSDGLAASQIYSPQGINVNGGWQDAPTPSSVTSPTEGPGSV
HSDTSN
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggacgagcagccgcggctgatgcactcgcacggcgtggtgggcatggccgggcacccg
ggcctggggcagcacatgccggacggctcggagggagaagggcgcaagcaagacatcgga
gacattttacagcaaattatgaccattactgaccagagtttggacgaagctcaggccagg
aaacacgcactgaattgtcacagaatgaaacctgccctattcaacgtcttgtgtgaaatt
aaagagaaaacagtgctgagcatccgcggcgctcaggaggaggagcctccggaccctcag
ctgatgcgtctggataacatgctgctggcggagggcgtgtccggaccggagaagggtggc
ggctctgctgctgccgctgccgccgccgctgctgccggtggagccggcgcggataattcg
gctgagcattccgattacagagcgaaactttcccagatccgccaaatctaccacacagag
ctggagaaatacgaacaggcgtgtaacgagttcaccacccacgtgatgaacctcctgcgt
gagcagtcccgcacgcggccgatctcgcccaaagaaatcgagcgcatggtcggcatcatc
caccgcaagttcagctccatccagatgcagctgaagcagagcacctgcgaagccgtcatg
atcctgcgctcgcgcttcctcgacgccagacgaaagaggagaaactttaacaagcaggcc
acagagatcctgaatgaatatttctactcccacctcagtaacccgtatcccagcgaggag
gccaaggaggaactggccaaaaaatgctccatcacagtctcccaggtctccaactggttt
ggaaacaagaggatcagatacaagaagaacatcggcaaattccaggaagaagccaacatg
tacgccgccaagaccgccgtcaccgcggccagcgcctccgcccacggcagccaagccaac
tcaccgtccacgcccaactccgccggttctgctggctcttttaacatgtcaaactcgggg
gatttgttcatgagcgttcagtctctgaatggagactcgtaccaggggggccaggtgggc
gccaacattcagtcacaggtggatacccttcgccatgttatcagtcaggccggcgggtac
agtgacggcctcgccgccagtcagatctacagtccgcagggcatcaacgtgaacggcggc
tggcaggacgctcccactccttcctcagtgacttcgcccacagaaggacccggcagcgtt
cattctgacacgtccaactga
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