Astyanax mexicanus (Mexican tetra): 103026464
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Entry
103026464 CDS
T05042
Symbol
eftud2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component isoform X2
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103026464 (eftud2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
amex03041
]
103026464 (eftud2)
Spliceosome [BR:
amex03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
103026464 (eftud2)
Complex C
U5 SnRNP specific factors
103026464 (eftud2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
103026464
NCBI-ProteinID:
XP_007256356
Ensembl:
ENSAMXG00000000568
UniProt:
A0A8B9LQ18
W5JZ16
LinkDB
All DBs
Position
19:27205866..27231079
Genome browser
AA seq
977 aa
AA seq
DB search
METDLYDEFGNYIGPELDSDEDEDVDAEDRDADEADEDDDDDDQVEGDEDGGGGGGGGGM
EVVLHEDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKQFTLMEQELPATVYD
MEFLADLMDSSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRDDADLRYTDILFTEQ
ERGVGIKSTPVTMVLPDSRGKSYLFNIMDTPGHVNFSDEVTAGIRISDGVVLFIDAAEGV
MLNTERLIKHAVQERLAITICINKVDRLILELKLPPTDAYYKLRHIVDEVNGMLSTYSTD
ESLVVSPLLGNVCFASSQYSICFTLGSFAKIYSDTFGDINYNEFAKRLWGDIYFNPKTRK
FTKKAPNSNSQRSFVEFVLEPLYKILSQVVGDVDTSLPRVLDELGIHLTKEELKLNIRPL
LRLVCNRFFGEFTGFVDMCVQHIPSPQGGARAKIEHSYTGGLDSDLGEAMAECDPDGPLM
CHTTKMYSTDDGVQFHAFGRVLSGTLQAGQPVKVLGENYTLEDEEDSQVCTIGRLWISVA
RYQIEVNRVPAGNWVLIEGCDQPIVKTATITEPRGTEEAQIFRPLKFNTASVIKIAVEPV
NPSELPKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKV
ADPVVTFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLG
EFFQTKYDWDLLAARSIWAFGPDTTGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTR
EGPLCDEPIRNVKFKILDAVIAQEPLHRGGGQVIPTARRVVYSAFLMATPRLMEPYYFVE
VQAPADCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQA
FSLSVFHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDD
PMLLELAKQDVVLNYPM
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atggagacggatctgtatgatgagtttggtaactacatcgggccagagctggactctgat
gaagatgaagatgtagatgcagaagaccgggatgcagatgaggcagatgaagatgacgat
gatgatgaccaggtggagggggatgaagatggtggtggtggtggtggtggtggtgggatg
gaggtggtgcttcacgaggataaaaagtactaccctactgcagaagaagtgtacgggccg
gaggtagagactatagtccaggaagaggacacccagcctctcactgagcctattattaaa
cctgtgaaaacaaagcagttcactcttatggagcaggagttgccagctacagtttatgac
atggagtttcttgctgatttgatggacagctcagaactgattcgaaatgtcactctgtgt
gggcatttacatcacggcaagacatgcttcgttgactgcttgatcgaacagactcaccca
gaaatccgcaagagagatgatgcagatctccgatacacagacattcttttcactgagcaa
gagagaggagttggtattaagagcactcctgttacaatggttctcccggactccagagga
aaatcctacctgtttaatattatggacaccccaggtcatgtgaatttctctgatgaggtc
acagcagggatcaggatctcggatggggttgtgctgtttatagatgctgcagagggggtg
atgctgaacacagagcgcttgattaagcatgcagtgcaggagcggttagccatcaccatc
tgcattaacaaagtggacagactgatcttggagcttaagctgccccctactgatgcttac
tacaaactgcgccacatagtggatgaagtcaatggcatgctcagcacatactcaactgat
gagtctctggtggtgtctcccctgttgggcaatgtgtgtttcgcttcatcacaatacagc
atctgctttacgctcgggtcttttgctaagatctactctgacacctttggtgacataaac
tacaatgagtttgcgaagagactctggggagacatctacttcaacccaaaaacgaggaag
ttcactaagaaagcccccaacagtaactctcagcgcagttttgtggagtttgttctggag
ccactctacaaaatcctctcacaggtggtcggagatgtggacacgtctttgccacgggtg
ctggatgagctgggaatccacctgaccaaagaggagctgaagctcaacatcaggcctctt
ctgcgtcttgtctgcaaccgcttctttggagagtttacaggttttgtggatatgtgtgtg
cagcacatcccttctcctcaaggtggcgccagagcaaagattgagcacagctacacagga
ggacttgactcagacctgggggaggccatggcagagtgtgaccctgatggtcctttgatg
tgtcacaccactaagatgtacagcacagatgatggagttcagttccacgcctttgggcgg
gttctaagtggaaccctgcaggcaggtcagccggtgaaggttttaggagagaactacact
ctggaggatgaggaggactcacaggtgtgcaccattggacgcctctggatctctgtagcc
aggtatcagattgaagtgaatcgtgttccggctgggaactgggtgctaattgaagggtgc
gaccagccgatcgttaaaactgcgaccatcacagagccgcgggggactgaagaggctcag
atcttcaggccgctgaagtttaacactgcctcagtcattaagattgctgtggaacctgtg
aacccttcagagctgcccaagatgctggatggactgaggaaagtcaacaagagctatccc
tccctcacaactaaggtggaggagtctggtgaacatgttatccttggcacaggtgaactg
tacctggactgtgtgatgcatgatctgaggaagatgtactctgagattgatattaaggtg
gctgatccagtggtgacattttgtgagacagtggtggaaacatcctccctcaagtgtttt
gctgaaacgcccaataaaaaaaataagatcaccatgattgctgagcctctggagaaaggg
cttgctgaagacattgagaacgaagtggtgcagattacatggaacaggaaaaagttggga
gaatttttccagactaagtatgattgggatttgcttgccgctcgttcgatctgggctttt
ggacccgacaccactgggccgaacatcttagtagatgatacgctgccttctgaggtggat
aaagctctccttggctcggtgaaggacagcatcgtacagggcttccagtggggaactaga
gaaggacccctctgtgatgaaccaatccgtaatgtcaagtttaagatcctggatgcagta
atagctcaggagccgctacacagaggaggaggacaggtcattcctacagccaggagagtt
gtgtattcagctttcctcatggccacgcccaggcttatggaaccctattactttgtggag
gttcaagctcctgctgactgcgtatctgctgtgtacactgtactggcacgcagaagaggt
catgtgactcaggacgcacccatccccggctccccgctctacaccatcaaggctttcatt
ccagcaatcgactcatttgggtttgagactgatctccgcacgcacacacagggccaggcc
ttctccctcagtgtgttccaccactggcagatcgttcctggtgatcctctggataagagc
attgtgattcgtccattggagcctcagcccgcccctcacctagccagagagttcatgatc
aagacccgcagacgcaagggtctgagcgaggacgtcagtatcagcaagttcttcgacgac
cctatgttgttggagctggccaagcaggacgtggtgctgaactatcccatgtaa
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