Astyanax mexicanus (Mexican tetra): 103027968
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Entry
103027968 CDS
T05042
Symbol
setdb1b
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1-B isoform X1
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex00310
Lysine degradation
amex01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
103027968 (setdb1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
amex03036
]
103027968 (setdb1b)
Enzymes [BR:
amex01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
103027968 (setdb1b)
Chromosome and associated proteins [BR:
amex03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
103027968 (setdb1b)
Heterochromatin formation proteins
Other heterochromatin formation proteins
103027968 (setdb1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5604
Tudor_4
Tudor_5
SET
Pre-SET
MBD
ODAD1_CC
Chromo_MORC2_6th
DUF4537
Flagellar_rod
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-GeneID:
103027968
NCBI-ProteinID:
XP_049335935
Ensembl:
ENSAMXG00000016168
LinkDB
All DBs
Position
6:complement(1776020..1794863)
Genome browser
AA seq
1230 aa
AA seq
DB search
MEVDSAVGSGGLEMELGPELEEELGVSLDELREWIEQQVDSSEAVQQRKAQLSELQEWVE
TREKEMANVDTLCSTASDSVTQCESLVKELYSKMGLVYRESSSDDDGGGDGSASEIIEID
DDDDDDVIAVGCAASSKRKGSRSVAAESVGNVVPPKKVVTPVKDSTFKEASAAIQRTSQQ
VQNLMQTVTKSTPSGSNAIVPPKVVAPPTQSRGPMMNIPAVFVSSAPGNSATQPNPAIKQ
DAMKVNMSILGKKRTKTWHRGTLVAINSVGNSFKYKVKFENKGKSLLSGNHVAFDYHPTL
ERLYVGARVVAKYKDGNQVWLYAGIVAEMPNSKNRMRFLIFFDDGYASYVGLPDLYPICR
PLQKSWEDIEDESCRDFIQEYITAYPNRPMVLLKPGQIIKTEWEGTWWRSRVEEVDGSLV
KMLFLDDKRSEWIYRGSTRLEPMFNLKISAANSQDKKLGGLQRPRPNMVPMRPRGPVVQY
NSNENNSLPGRPAGPQFTGPRPQFPCPPQAMRPDSNMIKKAPFVSPTRHTLNPDLQFKPV
STMPAQPSGPRFFLLQSSPVQTLIPMAPSQQAMQPAVSAYGGERIPQEPSYQAPNDRLFY
LSHSCTPDCLKRVRPTRPNMHRGRNPLLTPLLYEFRRMTARRRLNRKMSFHVIYKSPCGL
SLRNMGEIQRYLFQTTCDFIYLEMFCLDPYVLVDRRFQPQRPFYFIRDITAGREDIPLSC
VNEIDNTPPPSVAYSKERIPATGVYINTSADFLVGCDCTDGCQDKSKCACHQLTLQATGC
TPGGQINANAGYNSKRLDECLPTGIYECNKRCRCNHQMCINRLVQHGLQVRLQLFKTQNK
GWGIRCLDDVAKGSFVCIYAGKILTDDFADKEGLEMGDEYFANLDHIESVENFKEGYESE
AHCSDSEGSGVDMNRVKVRAPNQQGKHPRKSEDRNSSTTGKGQGSSESGDSDEDKDSNPD
ESDSSDDTFVKDTHYTSSSVWRSYTTRRQSKGLKEESQDSKDGMSVTGGGTEEQKPPPMP
EESGKSKVASWLTSQSESTGDQSVKAEEQPKTEKKEVMTLSDSDDVQTISSGSDDNKERE
KKTQAVVKRQVAVKSTRGIALKGPHGIKMKVGGGAGGGAGGGGNQGQGGEGGPKTTRQFF
DGEESCYIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTEL
TWDYNYEVGSVEGKELLCCCGSTECRGRLL
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggactccgccgtgggctctggaggcctggagatggagctgggtccggagctg
gaggaggagttgggtgtttctctggatgaactgcgcgagtggatcgagcagcaggtggac
agcagcgaggctgtgcagcagaggaaagctcagctatcggagctgcaggaatgggttgag
acgagggaaaaagagatggctaatgtggatacgctctgctccactgcttcagattcagtt
acgcagtgcgagtccctggtgaaagagctgtacagtaaaatgggtctggtgtatcgggag
agtagttctgatgacgatggcggaggagacggcagtgcttctgagattattgaaattgat
gatgatgatgacgatgatgtcatcgctgtgggctgtgctgcatcaagtaagcgtaaaggc
agtaggtcagtagctgcagaaagtgtggggaatgtggtcccaccaaagaaagttgtgacc
ccggtcaaagattcaacgtttaaggaagcctcggcagctattcagagaacttcacagcaa
gtgcagaacttgatgcagacggtcaccaaaagcaccccgtccggatccaacgccatcgtt
ccacctaaagtggtggccccgcccactcagagccgaggtcccatgatgaacatcccggca
gtgttcgtgtcctcagccccaggaaactcggccacccagccaaacccggccataaaacag
gacgccatgaaggtcaacatgagcattctgggtaaaaaacgcaccaagacgtggcaccgc
ggaaccctcgtggccatcaactccgtgggaaacagttttaagtataaggtgaagtttgag
aataaagggaagagtctgctgtctgggaatcacgtggcctttgactatcaccccactctg
gagaggctgtacgtgggagcccgggttgtcgccaaatacaaagacggaaaccaggtgtgg
ctgtacgccggtattgtggccgagatgcccaacagcaagaaccgtatgaggttcctcatc
ttttttgacgatggctatgcttcctacgtgggccttcctgacctttaccccatatgcaga
cccttgcagaagtcgtgggaggacatagaggatgagtcgtgtcgggattttattcaggag
tacatcaccgcgtaccccaacaggcctatggtcctgctgaagccaggccagatcattaaa
accgagtgggaggggacgtggtggaggagccgagtggaggaggtggacggcagcttggtg
aaaatgctgtttttggatgataagcgcagtgagtggatctatcgtgggtccacccgtctg
gagcccatgttcaacctgaaaattagtgcagccaacagccaggataagaagctcggaggc
ctgcagaggccaagacccaacatggtaccaatgagacctcgaggacctgtcgtccagtac
aattctaatgagaacaattcgttacccggtcgacctgcaggccctcagtttacaggacct
cggccgcagttcccctgccccccgcaggccatgcgccctgacagtaacatgattaagaag
gcaccatttgtttctccgactcggcacaccctgaaccccgaccttcagttcaaacccgtc
agcaccatgcccgcccaacccagcggccccaggttcttcctgctgcagtccagtccggtg
cagaccctcattcccatggccccgtcccagcaggcgatgcaaccggcggtgtctgcgtac
gggggagagcggatcccccaggagccgtcctatcaggcccccaacgaccgcctgttctac
ctctcccactcctgcacccccgactgcctgaaacgcgtccggcccacccgacccaacatg
caccgcggccgcaaccccctcctcacacccctgctgtacgagttccgccgcatgaccgcc
cgcagacgcctcaaccgcaagatgtcgttccacgttatctataagtctccgtgtggtctg
agcctgaggaacatgggggagatccagcgctacctcttccagacgacctgtgacttcatc
tacctggagatgttctgcctggacccgtacgtgctggtggaccgtcgcttccagccgcag
aggcccttctacttcatccgggacatcacagcgggacgggaggacatccccctgtcctgt
gtgaacgagatcgataacactcctcctcccagcgtcgcctacagcaaagagcgcatccct
gcaaccggggtctacatcaacaccagcgcagacttcctggtgggctgcgactgcacagac
ggctgccaggacaagtctaagtgtgcctgccaccagctgacgctgcaggctactgggtgt
actccagggggtcagataaacgccaacgctgggtacaacagcaagaggctggacgagtgc
ttgcccacagggatatacgagtgtaacaagcgctgccgctgtaaccatcagatgtgcatt
aaccgcttggtgcagcacggcctgcaggtgcgcctgcagctctttaaaacccagaataaa
ggctggggcatccgctgcctcgacgacgtggccaaaggttccttcgtctgcatctacgca
ggcaagatcctcacggatgactttgcggataaagaaggcttggagatgggagacgagtac
tttgctaacctggaccatattgagagtgtggagaattttaaggagggctatgagagcgag
gcgcactgctcggacagcgagggcagcggcgtggacatgaaccgggttaaagttcgagct
ccgaaccagcagggcaaacatccccgcaagtcagaggaccgcaacagcagcactaccggc
aaaggccaaggctcgtctgaatctggagacagcgacgaggacaaggactcgaaccctgac
gagagcgacagctcagacgacacgttcgtaaaagacacacactacacgtccagctctgtg
tggaggagctacaccacccgccgacagagtaaaggcctgaaagaggagagtcaggacagt
aaggatgggatgagcgtgacgggtggaggaacagaggagcagaagcctccccccatgcct
gaggagagcggaaagagtaaagtggcgtcttggttgaccagccagtctgaatctactgga
gatcaaagtgttaaagcagaggaacaaccgaagactgagaagaaggaagtgatgaccctc
tcggacagtgatgatgtgcagaccatcagctccgggtcagacgacaacaaagagcgcgaa
aagaagactcaggcggtggtgaagaggcaggtggcggtgaagtccacgcggggcatcgct
ctgaaaggccctcacggtataaagatgaaggtgggcggaggtgccgggggcggggccgga
gggggtggtaatcagggccaaggcggagaaggcggccccaaaaccacccgtcagttcttc
gatggggaggagtcttgttacatcattgatgctaaattagagggaaacctgggacgatac
ctcaaccacagctgcagtcctaacctgtttgtgcagaacgtgtttgtggacactcacgac
ctgcggttcccctgggtggcgttcttcgcaagcaagcgtatccgtgcggggacagagctg
acctgggactataactatgaggtgggcagtgtggaggggaaggagctgctgtgctgttgt
ggatctacagagtgtcgtgggcgcctgctgtaa
DBGET
integrated database retrieval system
