Astyanax mexicanus (Mexican tetra): 103027972
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Entry
103027972 CDS
T05042
Symbol
fads2
Name
(RefSeq) acyl-CoA 6-desaturase
KO
K10226
acyl-CoA 6-desaturase (Delta-6 desaturase) [EC:
1.14.19.3
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex00592
alpha-Linolenic acid metabolism
amex01040
Biosynthesis of unsaturated fatty acids
amex01100
Metabolic pathways
amex01212
Fatty acid metabolism
amex03320
PPAR signaling pathway
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09100 Metabolism
09103 Lipid metabolism
00592 alpha-Linolenic acid metabolism
103027972 (fads2)
01040 Biosynthesis of unsaturated fatty acids
103027972 (fads2)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
103027972 (fads2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
amex01004
]
103027972 (fads2)
Enzymes [BR:
amex01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.19 With oxidation of a pair of donors resulting in the reduction of O2 to two molecules of water
1.14.19.3 acyl-CoA 6-desaturase
103027972 (fads2)
Lipid biosynthesis proteins [BR:
amex01004
]
Desaturase
Front-end
103027972 (fads2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FA_desaturase
Cyt-b5
CHDNT
Motif
Other DBs
NCBI-GeneID:
103027972
NCBI-ProteinID:
XP_007235183
Ensembl:
ENSAMXG00000015974
UniProt:
A0A8B9LC50
W5L9D1
LinkDB
All DBs
Position
2:complement(47162988..47178002)
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AA seq
445 aa
AA seq
DB search
MGGGSHQNEDVSTEGRGANAVYTWDEVQKHSHRGDQWVVIERKVYNVSNWVNRHPGGRRV
IGHYAGEDATEAFTAFHPDQKFVRKFMKPLLVGELAPSEPSQDNKKNAALVADFQALREK
FNAEGLFRTSPLFFMMHLGHILVLEAISLALLWHFGNGWITTILCILLLATAQSQAGWLQ
HDFGHLSVFKRSGWDHVAHKFVIGHLKGASANWWNHRHFQHHAKPNVVLKDPDINMLKIL
VLGNVLPVEYGIKKLKNLPYNHQHKYFFFIGPPLLIPVYFNMHILQTMIMQRDWVDFAWY
LSYYARYFSCYVPFFGFFGSIAILTCVRFLESHWFVWVTQMNHIPMDIDYDIHEDWLSMQ
LRATCNVEQSFFNDWFSGHLNFQIEHHLFPTMPRHNYIRAAPRVQELCKKYGVQYQVKGL
WEAWSDIVRSLKKSGELWLDAYLHK
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgggtgggggcagtcatcagaacgaggatgtctcgacagaaggcagaggggcgaatgcc
gtatacacctgggatgaggtgcagaaacacagtcatcggggagaccagtgggtggtgatc
gagcggaaggtgtacaatgtcagcaactgggttaacagacatcctggaggccgcagggtt
atcggtcattacgctggagaggatgcaacggaagcgtttacagcattccatcctgatcag
aagttcgtacggaagtttatgaaaccactgctggttggagagctagcaccctctgagccc
agccaggacaacaagaaaaatgctgccctggttgcagatttccaggcattgcgggagaag
tttaatgcagagggtttgttccgcactagtcctctgttcttcatgatgcacctcggccat
attctagtcctggaagccatatctctggcgctgctttggcattttggcaacggctggatt
accacaattctatgtattttattactggctactgcacagtctcaggctggctggctgcaa
catgacttcggccatctgtccgtcttcaagaggtccggctgggatcatgtagcgcacaaa
ttcgtcattggacatctaaagggagcctcagcaaactggtggaaccatcgtcactttcaa
caccatgctaagcccaatgtggtccttaaggaccctgacatcaacatgctgaagatcctg
gtactgggaaacgtgctgcctgtagagtatggaattaaaaagttgaagaacttgccctac
aaccatcagcacaagtacttctttttcattggtcctcctctgctcatcccagtgtacttc
aacatgcacattttgcagacgatgatcatgcagcgggactgggtggactttgcatggtat
ctgtcctactacgcacgctacttctcttgttatgttcccttttttggattcttcggatca
attgcgattctgacctgtgtgaggtttttggagagtcactggtttgtgtgggtgacccag
atgaaccatatccctatggatatagactacgacatacatgaggactggctaagcatgcag
ttgagagccacctgcaacgttgagcagtcattcttcaatgactggtttagtggtcacctg
aacttccagatcgagcaccatctgtttcccacaatgcctcgtcataactacatccgtgct
gctcctcgggtgcaggagctttgcaagaagtatggagttcagtaccaagtcaagggctta
tgggaggcctggtctgacatcgtcaggtctctgaagaagtcaggagagctgtggctggac
gcttaccttcacaaataa
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