KEGG   Astyanax mexicanus (Mexican tetra): 103028261
Entry
103028261         CDS       T05042                                 
Symbol
traf2b
Name
(RefSeq) TNF receptor-associated factor 2 isoform X1
  KO
K03173  TNF receptor-associated factor 2 [EC:2.3.2.27]
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex04010  MAPK signaling pathway
amex04137  Mitophagy - animal
amex04141  Protein processing in endoplasmic reticulum
amex04210  Apoptosis
amex04217  Necroptosis
amex04621  NOD-like receptor signaling pathway
amex04622  RIG-I-like receptor signaling pathway
amex04920  Adipocytokine signaling pathway
amex05132  Salmonella infection
amex05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:amex00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    103028261 (traf2b)
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    103028261 (traf2b)
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    103028261 (traf2b)
  09143 Cell growth and death
   04210 Apoptosis
    103028261 (traf2b)
   04217 Necroptosis
    103028261 (traf2b)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    103028261 (traf2b)
   04622 RIG-I-like receptor signaling pathway
    103028261 (traf2b)
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    103028261 (traf2b)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    103028261 (traf2b)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    103028261 (traf2b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:amex03019]
    103028261 (traf2b)
   04121 Ubiquitin system [BR:amex04121]
    103028261 (traf2b)
Enzymes [BR:amex01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     103028261 (traf2b)
Messenger RNA biogenesis [BR:amex03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     103028261 (traf2b)
Ubiquitin system [BR:amex04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    103028261 (traf2b)
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 TRAF_BIRC3_bd zf-TRAF TRAF2_zf zf-C3HC4 TRAF3_RING zf-RING_4 zf-C3HC4_2 zf-RING_5 TRAFD1-XIAF1_ZnF Sina_ZnF zf-C3HC4_5
Other DBs
NCBI-GeneID: 103028261
NCBI-ProteinID: XP_007254086
Ensembl: ENSAMXG00000009259
UniProt: A0A8B9HL90 W5KPL0
LinkDB
Position
1
AA seq 531 aa
MVSLADKWKGMARQSLPSSVDSTLPGISRQVLSVSMEPKYQCQQCKGVLRKPFQAQCGHR
FCVFCFKQLTSSGPIPCEACRAEGIFEMEHSMLSITEAFPDNAARREIDGLPAKCPNDGC
SWNGTLKEYEVQHEGRCEFERVKCEACQMMILLSDKDRHNERECEARTLNCKYCKVTFSF
KDIKAHDEICQKFPMQCKDCGKKKIPREKFAEHSKSCAKSKSACQFSEIGCRAVVDNGKQ
HEHEQSSIIEHLRLMLAVLSTVRVRSDGPGEWQEDSGLGLYRGPEDAAPPGAHAAAHNAA
GGPGVQQKMTALENIVCVLNREVERTVLRLEALTRQQQLDQEKIENLSNKVRQLERTLTM
RDLQLAESEQALRELQFCTYDGVFVWKISDFSRRRQDALAGRAPAMFSPAFYSSKYGYKM
CLRLYLNGDGTGRGSHLSLFFVVMRGKYDALLKWPFSQKVTLMLLDQNNREHIIDAFRPD
ISSTSFQRPISEMNIASGCPLFCPLAKLAGKSSYLRDDTIFIKAIVDLTGL
NT seq 1596 nt   +upstreamnt  +downstreamnt
atggtcagcctcgcggataaatggaagggaatggcacgacaatctttgccctcttccgtg
gactccacattgccgggaatatcacggcaggtactctctgtatcaatggaacctaagtac
cagtgtcagcagtgcaaaggagttctgaggaagcccttccaggcccagtgtggacatcgg
ttctgtgtgttctgttttaaacagcttacaagctcgggccctataccctgtgaagcctgc
cgtgctgagggtattttcgaaatggagcactccatgcttagcatcactgaggcatttcca
gacaatgcagcacgaagagaaattgatggcctgcctgcaaagtgcccgaacgacggctgt
agttggaatggaacactgaaggagtatgaggtgcaacacgaaggtcgatgtgagtttgag
cgtgtaaagtgtgaagcatgtcaaatgatgatcctacttagcgacaaggatcgccacaat
gaaagagaatgtgaagccaggactctgaactgcaagtactgcaaggtcaccttcagcttc
aaagacattaaggctcatgatgaaatttgtcagaaatttcccatgcagtgcaaagactgt
ggtaaaaagaagatccccagggaaaagtttgcagaacatagcaagtcctgtgcgaagtct
aaatcagcatgtcagttcagcgaaattgggtgcagggctgtggttgataatggcaaacag
catgaacacgagcagagcagtatcattgagcacttacgcctcatgctggccgtgctgtcc
actgtgcgtgtgcgctctgatggaccaggagagtggcaagaggactctgggctcggactg
taccgtgggcctgaagacgcagctccaccaggagcccacgctgctgcccacaatgcagca
ggagggcctggcgtgcagcagaagatgacagcgctggagaacatagtgtgtgtgctgaat
cgagaagtagagcgcaccgttcttagactggaggcgttaacccgccagcagcagcttgac
caggagaagatcgagaatttatccaacaaggtgcgtcagctggaacgaaccctgactatg
cgagatttacagctggctgaatctgaacaagctttacgagagctacagttctgcacctat
gatggggtgtttgtatggaagatttcagatttctctcgccgcagacaagacgcgctggcc
ggccgagcccctgccatgttctcaccagccttctactccagtaaatatggctataagatg
tgtttgagactgtatctgaatggggacggcacaggcaggggttctcacctctccctcttc
ttcgtggtgatgagaggaaagtacgatgctcttctgaagtggcctttcagccaaaaggta
accctgatgctcttagaccagaataaccgggaacacataatcgatgccttcagacctgac
atcagctcaacatctttccagagacccattagtgagatgaacatcgctagtggctgcccg
ctcttctgcccactggctaaactggcaggcaaaagctcttatctgcgagacgacaccatt
ttcatcaaagcaatagtggatctcactgggctttag

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