Astyanax mexicanus (Mexican tetra): 103028498
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Entry
103028498 CDS
T05042
Symbol
tcf3a
Name
(RefSeq) transcription factor 3a isoform X1
KO
K09063
transcription factor E2-alpha
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
103028498 (tcf3a)
Transcription factors [BR:
amex03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Ubiquitous (class A) factors
103028498 (tcf3a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_IRO3
Motif
Other DBs
NCBI-GeneID:
103028498
NCBI-ProteinID:
XP_007236678
Ensembl:
ENSAMXG00000035851
UniProt:
A0A3B1IIX7
A0A8B9GW92
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All DBs
Position
4:complement(49488033..49529092)
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AA seq
629 aa
AA seq
DB search
MTDSNIRMTAATDKELSDLLDFSVMFPLPVPNGKNRSATLASTPFAGSGLDDRSGSGSWG
PGEQNSPSFSSRAFGDGAHFNEHESMSPYSSGIGGKSERGPYPFGSQFLPGEMPMSSPDG
LPSTGLKSTSPFYSSYANRRRPPDAVLDNQPKKIRKVPPGLPSSVYPAVPGEDYNQENAG
YPASKPGSVYPGPFYLQEGLQDPWAQPSYSSMPHLGQSAPFAVTNPQERLKRQHLPLSPP
NYPHHSNEVNGGSLPTSFQSASSGYGVPNHTPPINGADGILGNRNSTAGSSGDEIGKALA
SIYPADNNSSNFSSTPPTPVGSPQNMPAASSSQWSRGSTQATPSPSFEGGLQALQSKMED
CLGEALHVLRNHAVGSGPGSGLGAEMQSLLAAAGGAAGLSALSQSFPLHGRLPGLVPEHH
EESTGLPPTSSLLHGHHAPPQAPASSQPETFTSLPGSLSRSSLSSSTDIKREDKEDDENC
SLSDTMDDEKKDGKGSRPRTSLPSHGSLSEDDEDLPAEMKAEREKERRVANNARERLRVR
DINEAFKELGRMCQLHLSNEKPQTKLLILHQAVNVILNLEQQVRERNLNPKAACLKRREE
EKVTGVGGDSQMPLGGGHPGLGGDGHSHM
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgactgatagtaacatcagaatgaccgcagcaacagacaaggagctcagcgatctgctg
gacttcagtgtgatgtttcctcttccagtgccgaatggaaagaacagatctgctactcta
gccagcacgccattcgcaggctcaggtttggatgaccggagcgggtcaggctcctggggg
ccgggagaacagaacagtccgtccttcagttcacgggcatttggagatggagcccacttc
aatgaacatgaaagtatgtccccttacagctcagggattggaggtaaatcagaaagagga
ccttaccccttcggctcacagtttctaccaggggaaatgcccatgtccagtcctgatggc
cttccttccacgggtctcaaatcaacatccccgttctatagctcgtatgcaaaccgcagg
aggcccccggacgctgttctcgataaccagccgaagaagatcaggaaagtgccccctggc
ctcccatcctcagtctatccagcagttcccggtgaggattataaccaggagaacgcagga
tacccagcatccaaacctggcagtgtttaccctggtccattctatctgcaagaaggtctt
caggacccctgggctcagccaagttactcatccatgccccaccttggtcagtccgccccc
ttcgctgtcaccaacccacaggagcgcctgaagcggcaacacctgccactctcccctccg
aactaccctcaccacagcaatgaggtcaacggcggcagccttccaaccagcttccagtct
gcatccagcggttatggagtccccaaccacacgccgcccatcaatggagcagatggcatc
ctgggcaacagaaacagcacagcgggaagttcgggagatgaaatcggaaaggctctcgct
tcgatttaccccgcagacaacaacagcagcaacttctcctccactccgccgaccccggtg
ggctctccacagaacatgccagcggcctcttcctcccagtggtctagagggtccacacag
gctacaccatcacccagctttgagggtggactacaagcactgcaaagtaagatggaggac
tgcctgggtgaagctctgcatgtgttgcggaaccacgccgtggggtccggccccggctca
gggctgggagctgagatgcagagtctgctcgctgcagccggaggagctgcgggcctcagc
gccctcagccagagcttccccctccacggccggcttcctggcttggtgccagagcaccac
gaggaatcgacaggccttcctcccaccagcagcctcctgcatggacaccacgccccacca
caggcccctgccagctcccagccggagaccttcaccagtctgcctggaagcctctctcgc
tcctctctttcctccagcacagacatcaagagggaggacaaggaggatgatgagaactgt
tccctctccgacacgatggatgacgagaagaaggatggaaaggggagccgcccgcggaca
agtcttccaagccatgggagtcttagcgaggatgatgaggacctgccggcggagatgaag
gcagagcgtgagaaagagcggcgcgtggccaataacgcacgagagcgcctccgtgtgcgc
gacatcaacgaggccttcaaagagctgggacgcatgtgccagctgcacctgagcaatgag
aaaccgcagaccaagctgctcatcctgcaccaggctgttaacgttattctcaacctggag
cagcaagtgcgagagcgtaacctgaacccaaaggcagcatgtcttaagaggagagaggag
gagaaagtgacgggagtcggaggagattcccagatgcctctgggaggaggtcaccctggg
ctgggcggcgacgggcacagtcatatgtaa
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